RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ITSN2Q9NZM3 1697 aa27.7■■■□□ 2.02
CPNE1-224ENST00000483359 ARAP3Q8WWN8 1544 aa27.68■■■□□ 2.02
CPNE1-224ENST00000483359 CFAP74Q9C0B2 1584 aa27.67■■■□□ 2.02
CPNE1-224ENST00000483359 PHLDB1Q86UU1 1377 aa27.66■■■□□ 2.02
CPNE1-224ENST00000483359 ZNF777Q9ULD5 760 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-224ENST00000483359 NEO1Q92859 1461 aa27.65■■■□□ 2.02
CPNE1-224ENST00000483359 CFDP1Q9UEE9 299 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-224ENST00000483359 EFCAB2Q5VUJ9 269 aa27.64■■■□□ 2.02
CPNE1-224ENST00000483359 AKNAQ7Z591 1439 aa27.63■■■□□ 2.01
CPNE1-224ENST00000483359 MYOM3Q5VTT5 1437 aa27.62■■■□□ 2.01
CPNE1-224ENST00000483359 KDM6BO15054 1643 aa27.62■■■□□ 2.01
CPNE1-224ENST00000483359 ADGRL1O94910 1474 aa27.6■■■□□ 2.01
CPNE1-224ENST00000483359 SAMD9LQ8IVG5 1584 aa27.6■■■□□ 2.01
CPNE1-224ENST00000483359 COL17A1Q9UMD9 1497 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-224ENST00000483359 ZNF644Q9H582 1327 aaPredicted RBP27.56■■■□□ 2
CPNE1-224ENST00000483359 ABCC1P33527 1531 aa27.55■■■□□ 2
CPNE1-224ENST00000483359 SCAPERQ9BY12 1400 aa27.54■■■□□ 2
CPNE1-224ENST00000483359 SYCP2Q9BX26 1530 aa27.53■■■□□ 2
CPNE1-224ENST00000483359 CAMSAP2Q08AD1 1489 aa27.52■■■□□ 2
CPNE1-224ENST00000483359 FGD6Q6ZV73 1430 aa27.51■■□□□ 1.99
CPNE1-224ENST00000483359 RAPGEF3O95398 923 aa27.51■■□□□ 1.99
CPNE1-224ENST00000483359 MIA2Q96PC5 1412 aa27.5■■□□□ 1.99
CPNE1-224ENST00000483359 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
CPNE1-224ENST00000483359 DENND4BO75064 1496 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-224ENST00000483359 PTPN23Q9H3S7 1636 aa27.48■■□□□ 1.99
CPNE1-224ENST00000483359 FRMPD1Q5SYB0 1578 aa27.47■■□□□ 1.99
CPNE1-224ENST00000483359 HNRNPMP52272 730 aaKnown RBP eCLIP27.47■■□□□ 1.991e-7■■■■□ 25.4
CPNE1-224ENST00000483359 RICTORQ6R327 1708 aa27.47■■□□□ 1.99
CPNE1-224ENST00000483359 POGZQ7Z3K3 1410 aa27.46■■□□□ 1.99
CPNE1-224ENST00000483359 PLEKHH2Q8IVE3 1493 aa27.46■■□□□ 1.99
CPNE1-224ENST00000483359 TRAPPC8Q9Y2L5 1435 aa27.44■■□□□ 1.98
CPNE1-224ENST00000483359 KIAA1107Q9UPP5 1409 aa27.42■■□□□ 1.98
CPNE1-224ENST00000483359 AFAP1Q8N556 730 aa27.41■■□□□ 1.98
CPNE1-224ENST00000483359 ZNF518AQ6AHZ1 1483 aa27.41■■□□□ 1.98
CPNE1-224ENST00000483359 FAM50AQ14320 339 aaKnown RBP27.4■■□□□ 1.98
CPNE1-224ENST00000483359 TCOF1Q13428 1488 aaKnown RBP27.39■■□□□ 1.97
CPNE1-224ENST00000483359 MBD5Q9P267 1494 aa27.39■■□□□ 1.97
CPNE1-224ENST00000483359 KDM5CP41229 1560 aa27.35■■□□□ 1.97
CPNE1-224ENST00000483359 CCDC141Q6ZP82 1450 aa27.34■■□□□ 1.97
CPNE1-224ENST00000483359 MYT1LQ9UL68 1186 aa27.33■■□□□ 1.97
CPNE1-224ENST00000483359 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
CPNE1-224ENST00000483359 ZMYM4Q5VZL5 1548 aa27.33■■□□□ 1.97
CPNE1-224ENST00000483359 HECW2Q9P2P5 1572 aa27.31■■□□□ 1.96
CPNE1-224ENST00000483359 RRBP1Q9P2E9 1410 aaKnown RBP27.3■■□□□ 1.96
CPNE1-224ENST00000483359 DNMT1P26358 1616 aaKnown RBP27.29■■□□□ 1.96
CPNE1-224ENST00000483359 SPAG9O60271 1321 aaKnown RBP27.27■■□□□ 1.96
CPNE1-224ENST00000483359 YEATS2Q9ULM3 1422 aa27.27■■□□□ 1.96
CPNE1-224ENST00000483359 ZFYVE16Q7Z3T8 1539 aa27.27■■□□□ 1.96
CPNE1-224ENST00000483359 DAPK1P53355 1430 aa27.26■■□□□ 1.95
CPNE1-224ENST00000483359 CROCC2H7BZ55 1655 aa27.26■■□□□ 1.95
CPNE1-224ENST00000483359 ABCC5O15440 1437 aa27.25■■□□□ 1.95
CPNE1-224ENST00000483359 INO80Q9ULG1 1556 aaPredicted RBP27.25■■□□□ 1.95
CPNE1-224ENST00000483359 KIDINS220Q9ULH0 1771 aa27.25■■□□□ 1.95
CPNE1-224ENST00000483359 ATP7AQ04656 1500 aa27.25■■□□□ 1.95
CPNE1-224ENST00000483359 RSPH4AQ5TD94 716 aa27.24■■□□□ 1.95
CPNE1-224ENST00000483359 ARHGEF40Q8TER5 1519 aa27.24■■□□□ 1.95
CPNE1-224ENST00000483359 MLH3Q9UHC1 1453 aa27.24■■□□□ 1.95
CPNE1-224ENST00000483359 ITGAEP38570 1179 aa27.24■■□□□ 1.95
CPNE1-224ENST00000483359 MAGI2Q86UL8 1455 aa27.23■■□□□ 1.95
CPNE1-224ENST00000483359 TSPY4P0CV99 314 aa27.22■■□□□ 1.95
CPNE1-224ENST00000483359 TSPY10P0CW01 314 aa27.22■■□□□ 1.95
CPNE1-224ENST00000483359 ABCA6Q8N139 1617 aa27.22■■□□□ 1.95
CPNE1-224ENST00000483359 C9orf84Q5VXU9 1444 aa27.21■■□□□ 1.95
CPNE1-224ENST00000483359 DIP2CQ9Y2E4 1556 aa27.19■■□□□ 1.94
CPNE1-224ENST00000483359 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
CPNE1-224ENST00000483359 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.18■■□□□ 1.947e-10■■□□□ 13.2
CPNE1-224ENST00000483359 SHANK2Q9UPX8 1470 aa27.17■■□□□ 1.94
CPNE1-224ENST00000483359 MAST1Q9Y2H9 1570 aa27.17■■□□□ 1.94
CPNE1-224ENST00000483359 RTEL1-TNFRSF6BF6WH68 1400 aa27.15■■□□□ 1.94
CPNE1-224ENST00000483359 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
CPNE1-224ENST00000483359 ADGBQ8N7X0 1667 aa27.12■■□□□ 1.93
CPNE1-224ENST00000483359 ATP10AO60312 1499 aa27.11■■□□□ 1.93
CPNE1-224ENST00000483359 SIGLEC1Q9BZZ2 1709 aa27.1■■□□□ 1.93
CPNE1-224ENST00000483359 PLXNC1O60486 1568 aa27.09■■□□□ 1.93
CPNE1-224ENST00000483359 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
CPNE1-224ENST00000483359 A2MP01023 1474 aa27.05■■□□□ 1.92
CPNE1-224ENST00000483359 ARID4BQ4LE39 1312 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-224ENST00000483359 ANKRD30AQ9BXX3 1397 aa27.05■■□□□ 1.92
CPNE1-224ENST00000483359 KIF15Q9NS87 1388 aa27.04■■□□□ 1.92
CPNE1-224ENST00000483359 ADGRL2O95490 1459 aa27.04■■□□□ 1.92
CPNE1-224ENST00000483359 NCOA1Q15788 1441 aa27.03■■□□□ 1.92
CPNE1-224ENST00000483359 REREQ9P2R6 1566 aa27.02■■□□□ 1.92
CPNE1-224ENST00000483359 DUOX2Q9NRD8 1548 aa26.98■■□□□ 1.91
CPNE1-224ENST00000483359 DHX29Q7Z478 1369 aaKnown RBP26.97■■□□□ 1.91
CPNE1-224ENST00000483359 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
CPNE1-224ENST00000483359 MLECQ14165 292 aa26.96■■□□□ 1.91
CPNE1-224ENST00000483359 AGLP35573 1532 aa26.93■■□□□ 1.9
CPNE1-224ENST00000483359 KIF3BO15066 747 aa26.91■■□□□ 1.9
CPNE1-224ENST00000483359 ERBINQ96RT1 1412 aa26.9■■□□□ 1.9
CPNE1-224ENST00000483359 BCORL1Q5H9F3 1711 aa26.9■■□□□ 1.9
CPNE1-224ENST00000483359 ANKRD50Q9ULJ7 1429 aa26.89■■□□□ 1.89
CPNE1-224ENST00000483359 EIF2AK4Q9P2K8 1649 aaKnown RBP26.88■■□□□ 1.89
CPNE1-224ENST00000483359 GCC2Q8IWJ2 1684 aa26.87■■□□□ 1.89
CPNE1-224ENST00000483359 GGT6Q6P531 493 aa26.87■■□□□ 1.89
CPNE1-224ENST00000483359 NAIPQ13075 1403 aa26.85■■□□□ 1.89
CPNE1-224ENST00000483359 HFM1A2PYH4 1435 aa26.85■■□□□ 1.89
CPNE1-224ENST00000483359 TRIM26Q12899 539 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-224ENST00000483359 MADDQ8WXG6 1647 aa26.82■■□□□ 1.88
CPNE1-224ENST00000483359 RNF17Q9BXT8 1623 aaKnown RBP26.81■■□□□ 1.88
CPNE1-224ENST00000483359 ADAMTSL3P82987 1691 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms