RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
SNRNP200-203ENST00000480242 MIA2Q96PC5 1412 aa12.53□□□□□ -0.4
SNRNP200-203ENST00000480242 MAGI2Q86UL8 1455 aa12.52□□□□□ -0.4
SNRNP200-203ENST00000480242 KDM5CP41229 1560 aa12.52□□□□□ -0.4
SNRNP200-203ENST00000480242 NEURL4Q96JN8 1562 aa12.52□□□□□ -0.41
SNRNP200-203ENST00000480242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNRNP200-203ENST00000480242 UNC13BO14795 1591 aa12.51□□□□□ -0.41
SNRNP200-203ENST00000480242 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-203ENST00000480242 ATP10BO94823 1461 aa12.5□□□□□ -0.41
SNRNP200-203ENST00000480242 RICTORQ6R327 1708 aa12.5□□□□□ -0.41
SNRNP200-203ENST00000480242 SAMD9LQ8IVG5 1584 aa12.5□□□□□ -0.41
SNRNP200-203ENST00000480242 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
SNRNP200-203ENST00000480242 ZMYM4Q5VZL5 1548 aa12.49□□□□□ -0.41
SNRNP200-203ENST00000480242 CARMIL2Q6F5E8 1435 aa12.49□□□□□ -0.41
SNRNP200-203ENST00000480242 FAM135AQ9P2D6 1515 aa12.48□□□□□ -0.41
SNRNP200-203ENST00000480242 DIP2BQ9P265 1576 aa12.48□□□□□ -0.41
SNRNP200-203ENST00000480242 ABCC1P33527 1531 aa12.48□□□□□ -0.41
SNRNP200-203ENST00000480242 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
SNRNP200-203ENST00000480242 RNF17Q9BXT8 1623 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-203ENST00000480242 FRMPD1Q5SYB0 1578 aa12.47□□□□□ -0.41
SNRNP200-203ENST00000480242 UACAQ9BZF9 1416 aa12.47□□□□□ -0.41
SNRNP200-203ENST00000480242 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.42
SNRNP200-203ENST00000480242 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-203ENST00000480242 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-203ENST00000480242 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-203ENST00000480242 APLP2Q06481 763 aa12.44□□□□□ -0.42
SNRNP200-203ENST00000480242 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
SNRNP200-203ENST00000480242 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
SNRNP200-203ENST00000480242 NCOA2Q15596 1464 aa12.42□□□□□ -0.42
SNRNP200-203ENST00000480242 MYOM3Q5VTT5 1437 aa12.39□□□□□ -0.43
SNRNP200-203ENST00000480242 MROH1Q8NDA8 1641 aa12.38□□□□□ -0.43
SNRNP200-203ENST00000480242 GPATCH8Q9UKJ3 1502 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-203ENST00000480242 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
SNRNP200-203ENST00000480242 MBD5Q9P267 1494 aa12.38□□□□□ -0.43
SNRNP200-203ENST00000480242 ZC3H13Q5T200 1668 aaKnown RBP12.37□□□□□ -0.43
SNRNP200-203ENST00000480242 KIAA1107Q9UPP5 1409 aa12.37□□□□□ -0.43
SNRNP200-203ENST00000480242 IQGAP3Q86VI3 1631 aa12.37□□□□□ -0.43
SNRNP200-203ENST00000480242 ROCK1Q13464 1354 aa12.35□□□□□ -0.43
SNRNP200-203ENST00000480242 FGD6Q6ZV73 1430 aa12.35□□□□□ -0.43
SNRNP200-203ENST00000480242 ZFYVE16Q7Z3T8 1539 aa12.34□□□□□ -0.43
SNRNP200-203ENST00000480242 KIDINS220Q9ULH0 1771 aa12.33□□□□□ -0.44
SNRNP200-203ENST00000480242 KDM5AP29375 1690 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-203ENST00000480242 PTPRGP23470 1445 aa12.32□□□□□ -0.44
SNRNP200-203ENST00000480242 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-203ENST00000480242 BCANQ96GW7 911 aa12.31□□□□□ -0.44
SNRNP200-203ENST00000480242 IFT172Q9UG01 1749 aa12.31□□□□□ -0.44
SNRNP200-203ENST00000480242 LMTK2Q8IWU2 1503 aa12.31□□□□□ -0.44
SNRNP200-203ENST00000480242 ITGAEP38570 1179 aa12.3□□□□□ -0.44
SNRNP200-203ENST00000480242 PHLDB1Q86UU1 1377 aa12.3□□□□□ -0.44
SNRNP200-203ENST00000480242 PRDM15P57071 1507 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-203ENST00000480242 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-203ENST00000480242 CAMSAP2Q08AD1 1489 aa12.3□□□□□ -0.44
SNRNP200-203ENST00000480242 PLEKHH2Q8IVE3 1493 aa12.3□□□□□ -0.44
SNRNP200-203ENST00000480242 P3H3Q8IVL6 736 aa12.29□□□□□ -0.44
SNRNP200-203ENST00000480242 NEO1Q92859 1461 aa12.29□□□□□ -0.44
SNRNP200-203ENST00000480242 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
SNRNP200-203ENST00000480242 MROH2AA6NES4 1674 aa12.28□□□□□ -0.44
SNRNP200-203ENST00000480242 CLSPNQ9HAW4 1339 aa12.27□□□□□ -0.44
SNRNP200-203ENST00000480242 RTEL1-TNFRSF6BF6WH68 1400 aa12.27□□□□□ -0.45
SNRNP200-203ENST00000480242 JPH4Q96JJ6 628 aa12.27□□□□□ -0.45
SNRNP200-203ENST00000480242 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
SNRNP200-203ENST00000480242 PLCH2O75038 1416 aa12.26□□□□□ -0.45
SNRNP200-203ENST00000480242 SIGLEC1Q9BZZ2 1709 aa12.26□□□□□ -0.45
SNRNP200-203ENST00000480242 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
SNRNP200-203ENST00000480242 KDM6BO15054 1643 aa12.25□□□□□ -0.45
SNRNP200-203ENST00000480242 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
SNRNP200-203ENST00000480242 PIK3C2BO00750 1634 aa12.25□□□□□ -0.45
SNRNP200-203ENST00000480242 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
SNRNP200-203ENST00000480242 ARHGEF12Q9NZN5 1544 aa12.24□□□□□ -0.45
SNRNP200-203ENST00000480242 ATP10AO60312 1499 aa12.24□□□□□ -0.45
SNRNP200-203ENST00000480242 LAMC1P11047 1609 aa12.24□□□□□ -0.45
SNRNP200-203ENST00000480242 ABCA6Q8N139 1617 aa12.23□□□□□ -0.45
SNRNP200-203ENST00000480242 AGLP35573 1532 aa12.22□□□□□ -0.45
SNRNP200-203ENST00000480242 PTPRKQ15262 1439 aa12.21□□□□□ -0.45
SNRNP200-203ENST00000480242 CEP152O94986 1710 aa12.21□□□□□ -0.45
SNRNP200-203ENST00000480242 DAPK1P53355 1430 aa12.21□□□□□ -0.46
SNRNP200-203ENST00000480242 TET3O43151 1660 aa12.2□□□□□ -0.46
SNRNP200-203ENST00000480242 MLH3Q9UHC1 1453 aa12.2□□□□□ -0.46
SNRNP200-203ENST00000480242 DIP2CQ9Y2E4 1556 aa12.19□□□□□ -0.46
SNRNP200-203ENST00000480242 ARHGEF40Q8TER5 1519 aa12.19□□□□□ -0.46
SNRNP200-203ENST00000480242 ARID3CA6NKF2 412 aa12.19□□□□□ -0.46
SNRNP200-203ENST00000480242 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
SNRNP200-203ENST00000480242 ABCC5O15440 1437 aa12.18□□□□□ -0.46
SNRNP200-203ENST00000480242 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-203ENST00000480242 TEX14Q8IWB6 1497 aa12.17□□□□□ -0.46
SNRNP200-203ENST00000480242 DUOX2Q9NRD8 1548 aa12.17□□□□□ -0.46
SNRNP200-203ENST00000480242 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
SNRNP200-203ENST00000480242 ERBINQ96RT1 1412 aa12.16□□□□□ -0.46
SNRNP200-203ENST00000480242 ZNF518AQ6AHZ1 1483 aa12.16□□□□□ -0.46
SNRNP200-203ENST00000480242 CCDC141Q6ZP82 1450 aa12.16□□□□□ -0.46
SNRNP200-203ENST00000480242 KIAA1210Q9ULL0 1709 aa12.16□□□□□ -0.46
SNRNP200-203ENST00000480242 ASXL2Q76L83 1435 aa12.15□□□□□ -0.46
SNRNP200-203ENST00000480242 SYCP2Q9BX26 1530 aa12.15□□□□□ -0.46
SNRNP200-203ENST00000480242 NAIPQ13075 1403 aa12.14□□□□□ -0.47
SNRNP200-203ENST00000480242 FKBP8Q14318 412 aa12.14□□□□□ -0.47
SNRNP200-203ENST00000480242 FBLN2P98095 1184 aa12.14□□□□□ -0.47
SNRNP200-203ENST00000480242 ERICH6Q7L0X2 663 aa12.14□□□□□ -0.47
SNRNP200-203ENST00000480242 SPHKAPQ2M3C7 1700 aa12.13□□□□□ -0.47
SNRNP200-203ENST00000480242 ATP7AQ04656 1500 aa12.13□□□□□ -0.47
SNRNP200-203ENST00000480242 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms