RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 KANK4Q5T7N3 995 aaPredicted RBP30.94■■■□□ 2.54
LIME1-205ENST00000480139 GPATCH8Q9UKJ3 1502 aaKnown RBP30.93■■■□□ 2.54
LIME1-205ENST00000480139 ITSN2Q9NZM3 1697 aa30.93■■■□□ 2.54
LIME1-205ENST00000480139 ARHGAP5Q13017 1502 aa30.93■■■□□ 2.54
LIME1-205ENST00000480139 CCNB3Q8WWL7 1395 aa30.91■■■□□ 2.54
LIME1-205ENST00000480139 AKNAQ7Z591 1439 aa30.9■■■□□ 2.54
LIME1-205ENST00000480139 COL17A1Q9UMD9 1497 aaPredicted RBP30.89■■■□□ 2.54
LIME1-205ENST00000480139 EFCAB2Q5VUJ9 269 aa30.89■■■□□ 2.54
LIME1-205ENST00000480139 ADGRL1O94910 1474 aa30.82■■■□□ 2.53
LIME1-205ENST00000480139 RICTORQ6R327 1708 aa30.78■■■□□ 2.52
LIME1-205ENST00000480139 ABCC1P33527 1531 aa30.78■■■□□ 2.52
LIME1-205ENST00000480139 DENND4BO75064 1496 aaPredicted RBP30.78■■■□□ 2.52
LIME1-205ENST00000480139 FRMPD1Q5SYB0 1578 aa30.78■■■□□ 2.52
LIME1-205ENST00000480139 SAMD9LQ8IVG5 1584 aa30.78■■■□□ 2.52
LIME1-205ENST00000480139 CFDP1Q9UEE9 299 aaPredicted RBP30.77■■■□□ 2.52
LIME1-205ENST00000480139 SCAPERQ9BY12 1400 aa30.75■■■□□ 2.51
LIME1-205ENST00000480139 PLEKHH2Q8IVE3 1493 aa30.74■■■□□ 2.51
LIME1-205ENST00000480139 MYOM3Q5VTT5 1437 aa30.73■■■□□ 2.51
LIME1-205ENST00000480139 POGZQ7Z3K3 1410 aa30.73■■■□□ 2.51
LIME1-205ENST00000480139 MIA2Q96PC5 1412 aa30.7■■■□□ 2.5
LIME1-205ENST00000480139 KIAA1107Q9UPP5 1409 aa30.7■■■□□ 2.5
LIME1-205ENST00000480139 ZMYM4Q5VZL5 1548 aa30.69■■■□□ 2.5
LIME1-205ENST00000480139 ZNF518AQ6AHZ1 1483 aa30.68■■■□□ 2.5
LIME1-205ENST00000480139 ARHGEF12Q9NZN5 1544 aa30.68■■■□□ 2.5
LIME1-205ENST00000480139 RAPGEF3O95398 923 aa30.67■■■□□ 2.5
LIME1-205ENST00000480139 ZNF777Q9ULD5 760 aaPredicted RBP30.66■■■□□ 2.5
LIME1-205ENST00000480139 SYCP2Q9BX26 1530 aa30.66■■■□□ 2.5
LIME1-205ENST00000480139 KDM5CP41229 1560 aa30.66■■■□□ 2.5
LIME1-205ENST00000480139 CAMSAP2Q08AD1 1489 aa30.64■■■□□ 2.5
LIME1-205ENST00000480139 MAGI2Q86UL8 1455 aa30.61■■■□□ 2.49
LIME1-205ENST00000480139 FGD6Q6ZV73 1430 aa30.59■■■□□ 2.49
LIME1-205ENST00000480139 TRAPPC8Q9Y2L5 1435 aa30.59■■■□□ 2.49
LIME1-205ENST00000480139 ZNF644Q9H582 1327 aaPredicted RBP30.59■■■□□ 2.49
LIME1-205ENST00000480139 MBD5Q9P267 1494 aa30.58■■■□□ 2.49
LIME1-205ENST00000480139 PTPN23Q9H3S7 1636 aa30.56■■■□□ 2.48
LIME1-205ENST00000480139 HECW2Q9P2P5 1572 aa30.56■■■□□ 2.48
LIME1-205ENST00000480139 ARHGEF5Q12774 1597 aa30.55■■■□□ 2.48
LIME1-205ENST00000480139 ARHGEF40Q8TER5 1519 aa30.55■■■□□ 2.48
LIME1-205ENST00000480139 HNRNPMP52272 730 aaKnown RBP eCLIP30.54■■■□□ 2.48
LIME1-205ENST00000480139 AFAP1Q8N556 730 aa30.54■■■□□ 2.48
LIME1-205ENST00000480139 TCOF1Q13428 1488 aaKnown RBP30.54■■■□□ 2.48
LIME1-205ENST00000480139 MLH3Q9UHC1 1453 aa30.53■■■□□ 2.48
LIME1-205ENST00000480139 ZFYVE16Q7Z3T8 1539 aa30.52■■■□□ 2.48
LIME1-205ENST00000480139 RSPH4AQ5TD94 716 aa30.5■■■□□ 2.47
LIME1-205ENST00000480139 CCDC141Q6ZP82 1450 aa30.5■■■□□ 2.47
LIME1-205ENST00000480139 INO80Q9ULG1 1556 aaPredicted RBP30.48■■■□□ 2.47
LIME1-205ENST00000480139 PPARGC1BQ86YN6 1023 aaKnown RBP30.47■■■□□ 2.47
LIME1-205ENST00000480139 KIDINS220Q9ULH0 1771 aa30.46■■■□□ 2.47
LIME1-205ENST00000480139 YEATS2Q9ULM3 1422 aa30.46■■■□□ 2.47
LIME1-205ENST00000480139 ATP7AQ04656 1500 aa30.43■■■□□ 2.46
LIME1-205ENST00000480139 ABCA6Q8N139 1617 aa30.42■■■□□ 2.46
LIME1-205ENST00000480139 SPAG9O60271 1321 aaKnown RBP30.42■■■□□ 2.46
LIME1-205ENST00000480139 DIP2CQ9Y2E4 1556 aa30.41■■■□□ 2.46
LIME1-205ENST00000480139 DNMT1P26358 1616 aaKnown RBP30.4■■■□□ 2.46
LIME1-205ENST00000480139 RTEL1-TNFRSF6BF6WH68 1400 aa30.4■■■□□ 2.46
LIME1-205ENST00000480139 MAST1Q9Y2H9 1570 aa30.4■■■□□ 2.46
LIME1-205ENST00000480139 CROCC2H7BZ55 1655 aa30.39■■■□□ 2.46
LIME1-205ENST00000480139 REREQ9P2R6 1566 aa30.39■■■□□ 2.46
LIME1-205ENST00000480139 ATP10AO60312 1499 aa30.38■■■□□ 2.45
LIME1-205ENST00000480139 SHANK2Q9UPX8 1470 aa30.36■■■□□ 2.45
LIME1-205ENST00000480139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.35■■■□□ 2.45
LIME1-205ENST00000480139 C9orf84Q5VXU9 1444 aa30.35■■■□□ 2.45
LIME1-205ENST00000480139 RRBP1Q9P2E9 1410 aaKnown RBP30.34■■■□□ 2.45
LIME1-205ENST00000480139 ABCC5O15440 1437 aa30.33■■■□□ 2.45
LIME1-205ENST00000480139 DAPK1P53355 1430 aa30.33■■■□□ 2.45
LIME1-205ENST00000480139 MYT1LQ9UL68 1186 aa30.33■■■□□ 2.45
LIME1-205ENST00000480139 TSPY4P0CV99 314 aa30.32■■■□□ 2.44
LIME1-205ENST00000480139 TSPY10P0CW01 314 aa30.32■■■□□ 2.44
LIME1-205ENST00000480139 ADGBQ8N7X0 1667 aa30.32■■■□□ 2.44
LIME1-205ENST00000480139 SIGLEC1Q9BZZ2 1709 aa30.3■■■□□ 2.44
LIME1-205ENST00000480139 FAM50AQ14320 339 aaKnown RBP30.29■■■□□ 2.44
LIME1-205ENST00000480139 PLXNC1O60486 1568 aa30.28■■■□□ 2.44
LIME1-205ENST00000480139 AGLP35573 1532 aa30.25■■■□□ 2.43
LIME1-205ENST00000480139 A2MP01023 1474 aa30.23■■■□□ 2.43
LIME1-205ENST00000480139 BCORL1Q5H9F3 1711 aa30.22■■■□□ 2.43
LIME1-205ENST00000480139 ADGRL2O95490 1459 aa30.18■■■□□ 2.42
LIME1-205ENST00000480139 ARID4BQ4LE39 1312 aaPredicted RBP30.16■■■□□ 2.42
LIME1-205ENST00000480139 DHX29Q7Z478 1369 aaKnown RBP30.15■■■□□ 2.42
LIME1-205ENST00000480139 ADAMTSL3P82987 1691 aa30.14■■■□□ 2.42
LIME1-205ENST00000480139 ANKRD30AQ9BXX3 1397 aa30.13■■■□□ 2.41
LIME1-205ENST00000480139 DUOX2Q9NRD8 1548 aa30.12■■■□□ 2.41
LIME1-205ENST00000480139 PTPRKQ15262 1439 aa30.12■■■□□ 2.41
LIME1-205ENST00000480139 NCOA1Q15788 1441 aa30.11■■■□□ 2.41
LIME1-205ENST00000480139 EIF2AK4Q9P2K8 1649 aaKnown RBP30.1■■■□□ 2.41
LIME1-205ENST00000480139 KIF15Q9NS87 1388 aa30.09■■■□□ 2.41
LIME1-205ENST00000480139 ROCK1Q13464 1354 aa30.08■■■□□ 2.41
LIME1-205ENST00000480139 KDM4FA0A1W2PPD8 638 aa30.07■■■□□ 2.4
LIME1-205ENST00000480139 CHIC2Q9UKJ5 165 aa30.06■■■□□ 2.4
LIME1-205ENST00000480139 ERBINQ96RT1 1412 aa30.05■■■□□ 2.4
LIME1-205ENST00000480139 MADDQ8WXG6 1647 aa30.04■■■□□ 2.4
LIME1-205ENST00000480139 FER1L4A9Z1Z3 1794 aa30.03■■■□□ 2.4
LIME1-205ENST00000480139 RRP7BPQ9NSQ0 103 aa30.01■■■□□ 2.39
LIME1-205ENST00000480139 RNF17Q9BXT8 1623 aaKnown RBP30■■■□□ 2.39
LIME1-205ENST00000480139 ITGAEP38570 1179 aa29.98■■■□□ 2.39
LIME1-205ENST00000480139 MLECQ14165 292 aa29.98■■■□□ 2.39
LIME1-205ENST00000480139 FAM135AQ9P2D6 1515 aa29.96■■■□□ 2.39
LIME1-205ENST00000480139 RIMS1Q86UR5 1692 aaKnown RBP29.96■■■□□ 2.39
LIME1-205ENST00000480139 KIF3BO15066 747 aa29.95■■■□□ 2.39
LIME1-205ENST00000480139 PPP6R1Q9UPN7 881 aa29.94■■■□□ 2.38
LIME1-205ENST00000480139 DEPDC5O75140 1603 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms