RNA–Protein interactions for RNA: ENST00000478404.1

RNF149-204, Transcript of ring finger protein 149, humanhuman

TSL 2

Gene RNF149, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-204ENST00000478404 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
RNF149-204ENST00000478404 DPY19L2Q6NUT2 758 aa12.21□□□□□ -0.45
RNF149-204ENST00000478404 TAOK2Q9UL54 1235 aa12.21□□□□□ -0.45
RNF149-204ENST00000478404 MYT1LQ9UL68 1186 aa12.21□□□□□ -0.45
RNF149-204ENST00000478404 PSEN1P49768 467 aa12.2□□□□□ -0.46
RNF149-204ENST00000478404 ZNF710Q8N1W2 664 aa12.19□□□□□ -0.46
RNF149-204ENST00000478404 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
RNF149-204ENST00000478404 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
RNF149-204ENST00000478404 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
RNF149-204ENST00000478404 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.46
RNF149-204ENST00000478404 STK25O00506 426 aa12.14□□□□□ -0.47
RNF149-204ENST00000478404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
RNF149-204ENST00000478404 ZFP91Q96JP5 570 aaPredicted RBP12.13□□□□□ -0.47
RNF149-204ENST00000478404 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
RNF149-204ENST00000478404 VARS2Q5ST30 1063 aaKnown RBP12.12□□□□□ -0.47
RNF149-204ENST00000478404 ZNF687Q8N1G0 1237 aa12.12□□□□□ -0.47
RNF149-204ENST00000478404 PTGER2P43116 358 aa12.11□□□□□ -0.47
RNF149-204ENST00000478404 G3V3G9 751 aa12.1□□□□□ -0.47
RNF149-204ENST00000478404 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
RNF149-204ENST00000478404 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
RNF149-204ENST00000478404 PDAP1Q13442 181 aaKnown RBP12.08□□□□□ -0.48
RNF149-204ENST00000478404 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
RNF149-204ENST00000478404 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
RNF149-204ENST00000478404 STK24Q9Y6E0 443 aa12.06□□□□□ -0.48
RNF149-204ENST00000478404 CABP2Q9NPB3 220 aa12.02□□□□□ -0.49
RNF149-204ENST00000478404 GPR153Q6NV75 609 aa12□□□□□ -0.49
RNF149-204ENST00000478404 BCANQ96GW7 911 aa11.97□□□□□ -0.49
RNF149-204ENST00000478404 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
RNF149-204ENST00000478404 RYDENQ9NUL5 291 aaKnown RBP11.92□□□□□ -0.5
RNF149-204ENST00000478404 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
RNF149-204ENST00000478404 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
RNF149-204ENST00000478404 LSM11P83369 360 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNF149-204ENST00000478404 PLA2G2EQ9NZK7 142 aa11.84□□□□□ -0.51
RNF149-204ENST00000478404 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
RNF149-204ENST00000478404 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
RNF149-204ENST00000478404 ARSIQ5FYB1 569 aa11.82□□□□□ -0.52
RNF149-204ENST00000478404 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
RNF149-204ENST00000478404 HCSTQ9UBK5 93 aa11.77□□□□□ -0.53
RNF149-204ENST00000478404 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
RNF149-204ENST00000478404 PBX2P40425 430 aa11.74□□□□□ -0.53
RNF149-204ENST00000478404 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
RNF149-204ENST00000478404 SOX12O15370 315 aa11.73□□□□□ -0.53
RNF149-204ENST00000478404 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.535e-12■■□□□ 12.4
RNF149-204ENST00000478404 PHF8Q9UPP1 1060 aa11.71□□□□□ -0.53
RNF149-204ENST00000478404 PPP1R37O75864 691 aa11.7□□□□□ -0.54
RNF149-204ENST00000478404 NLRP6P59044 892 aa11.7□□□□□ -0.54
RNF149-204ENST00000478404 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
RNF149-204ENST00000478404 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
RNF149-204ENST00000478404 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
RNF149-204ENST00000478404 NBR1Q14596 966 aa11.65□□□□□ -0.54
RNF149-204ENST00000478404 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
RNF149-204ENST00000478404 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
RNF149-204ENST00000478404 ADGRD1Q6QNK2 874 aa11.58□□□□□ -0.56
RNF149-204ENST00000478404 NUDT7P0C024 238 aa11.57□□□□□ -0.56
RNF149-204ENST00000478404 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
RNF149-204ENST00000478404 LHX6Q9UPM6 363 aa11.57□□□□□ -0.56
RNF149-204ENST00000478404 WDR70Q9NW82 654 aa11.56□□□□□ -0.56
RNF149-204ENST00000478404 KIF3CO14782 793 aa11.55□□□□□ -0.56
RNF149-204ENST00000478404 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
RNF149-204ENST00000478404 RGS20O76081 388 aa11.54□□□□□ -0.56
RNF149-204ENST00000478404 SLC34A2O95436 690 aa11.54□□□□□ -0.56
RNF149-204ENST00000478404 ARHGAP33O14559 1287 aa11.53□□□□□ -0.56
RNF149-204ENST00000478404 NCKAP5LQ9HCH0 1330 aa11.52□□□□□ -0.57
RNF149-204ENST00000478404 TK2O00142 265 aa11.51□□□□□ -0.57
RNF149-204ENST00000478404 HRO43593 1189 aa11.51□□□□□ -0.57
RNF149-204ENST00000478404 PCDHGA4Q9Y5G9 962 aa11.5□□□□□ -0.57
RNF149-204ENST00000478404 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
RNF149-204ENST00000478404 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
RNF149-204ENST00000478404 PSDA5PKW4 1024 aaPredicted RBP11.45□□□□□ -0.58
RNF149-204ENST00000478404 MFSD10Q14728 455 aa11.45□□□□□ -0.58
RNF149-204ENST00000478404 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
RNF149-204ENST00000478404 PDE4AP27815 886 aa11.44□□□□□ -0.58
RNF149-204ENST00000478404 E2F4Q16254 413 aa11.44□□□□□ -0.58
RNF149-204ENST00000478404 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
RNF149-204ENST00000478404 IRX2Q9BZI1 471 aaPredicted RBP11.43□□□□□ -0.58
RNF149-204ENST00000478404 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
RNF149-204ENST00000478404 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
RNF149-204ENST00000478404 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
RNF149-204ENST00000478404 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
RNF149-204ENST00000478404 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
RNF149-204ENST00000478404 PSEN2P49810 448 aa11.35□□□□□ -0.59
RNF149-204ENST00000478404 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
RNF149-204ENST00000478404 GPHNQ9NQX3 736 aaPredicted RBP11.34□□□□□ -0.59
RNF149-204ENST00000478404 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
RNF149-204ENST00000478404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
RNF149-204ENST00000478404 A0A0G2JS52 829 aa11.3□□□□□ -0.6
RNF149-204ENST00000478404 TESPA1A2RU30 521 aaPredicted RBP11.29□□□□□ -0.6
RNF149-204ENST00000478404 SEMA3EO15041 775 aa11.29□□□□□ -0.6
RNF149-204ENST00000478404 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
RNF149-204ENST00000478404 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
RNF149-204ENST00000478404 STAC3Q96MF2 364 aa11.29□□□□□ -0.6
RNF149-204ENST00000478404 PTCD2Q8WV60 388 aaKnown RBP11.28□□□□□ -0.6
RNF149-204ENST00000478404 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
RNF149-204ENST00000478404 PTPN5P54829 565 aa11.26□□□□□ -0.61
RNF149-204ENST00000478404 DSG2Q14126 1118 aa11.25□□□□□ -0.61
RNF149-204ENST00000478404 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
RNF149-204ENST00000478404 FOXK1P85037 733 aa11.23□□□□□ -0.61
RNF149-204ENST00000478404 VPS9D1Q9Y2B5 631 aa11.23□□□□□ -0.61
RNF149-204ENST00000478404 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
RNF149-204ENST00000478404 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms