RNA–Protein interactions for RNA: ENST00000478404.1

RNF149-204, Transcript of ring finger protein 149, humanhuman

TSL 2

Gene RNF149, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-204ENST00000478404 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
RNF149-204ENST00000478404 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
RNF149-204ENST00000478404 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
RNF149-204ENST00000478404 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
RNF149-204ENST00000478404 FOXD1Q16676 465 aa22.66■■□□□ 1.22
RNF149-204ENST00000478404 POTEDQ86YR6 584 aa22.18■■□□□ 1.14
RNF149-204ENST00000478404 MSH5O43196 834 aa21.49■■□□□ 1.03
RNF149-204ENST00000478404 PIAS4Q8N2W9 510 aaPredicted RBP20.95■□□□□ 0.94
RNF149-204ENST00000478404 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.89
RNF149-204ENST00000478404 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
RNF149-204ENST00000478404 ADRA2BP18089 450 aa20.49■□□□□ 0.87
RNF149-204ENST00000478404 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
RNF149-204ENST00000478404 MAPK8IP2Q13387 824 aaPredicted RBP19.05■□□□□ 0.64
RNF149-204ENST00000478404 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
RNF149-204ENST00000478404 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
RNF149-204ENST00000478404 RNF39Q9H2S5 420 aa18.28■□□□□ 0.52
RNF149-204ENST00000478404 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
RNF149-204ENST00000478404 HOXD11P31277 338 aaPredicted RBP18.15■□□□□ 0.5
RNF149-204ENST00000478404 C1QBPQ07021 282 aaKnown RBP17.99■□□□□ 0.47
RNF149-204ENST00000478404 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
RNF149-204ENST00000478404 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
RNF149-204ENST00000478404 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
RNF149-204ENST00000478404 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
RNF149-204ENST00000478404 POTEHQ6S545 545 aa17.23■□□□□ 0.35
RNF149-204ENST00000478404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
RNF149-204ENST00000478404 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
RNF149-204ENST00000478404 DSG3P32926 999 aa16.87■□□□□ 0.29
RNF149-204ENST00000478404 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
RNF149-204ENST00000478404 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
RNF149-204ENST00000478404 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
RNF149-204ENST00000478404 CAPN15O75808 1086 aa16.71■□□□□ 0.27
RNF149-204ENST00000478404 KCNA4P22459 653 aa16.71■□□□□ 0.27
RNF149-204ENST00000478404 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
RNF149-204ENST00000478404 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
RNF149-204ENST00000478404 APLP2Q06481 763 aa16.25■□□□□ 0.19
RNF149-204ENST00000478404 ABCB7O75027 752 aa16.24■□□□□ 0.19
RNF149-204ENST00000478404 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
RNF149-204ENST00000478404 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
RNF149-204ENST00000478404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
RNF149-204ENST00000478404 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
RNF149-204ENST00000478404 CHRDL2Q6WN34 429 aa16.02■□□□□ 0.16
RNF149-204ENST00000478404 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
RNF149-204ENST00000478404 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
RNF149-204ENST00000478404 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
RNF149-204ENST00000478404 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
RNF149-204ENST00000478404 POLA2Q14181 598 aa15.71■□□□□ 0.11
RNF149-204ENST00000478404 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
RNF149-204ENST00000478404 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
RNF149-204ENST00000478404 MYCNP04198 464 aaPredicted RBP15.52■□□□□ 0.08
RNF149-204ENST00000478404 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
RNF149-204ENST00000478404 ZBTB22O15209 634 aa15.43■□□□□ 0.06
RNF149-204ENST00000478404 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
RNF149-204ENST00000478404 HAX1O00165 279 aa15.36■□□□□ 0.05
RNF149-204ENST00000478404 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
RNF149-204ENST00000478404 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.04
RNF149-204ENST00000478404 PITPNM1O00562 1244 aa15.26■□□□□ 0.03
RNF149-204ENST00000478404 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
RNF149-204ENST00000478404 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
RNF149-204ENST00000478404 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
RNF149-204ENST00000478404 EVX2Q03828 476 aa15.16■□□□□ 0.02
RNF149-204ENST00000478404 C19orf67A6NJJ6 358 aa14.86□□□□□ -0.03
RNF149-204ENST00000478404 SPDYE2BA6NHP3 402 aa14.84□□□□□ -0.03
RNF149-204ENST00000478404 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
RNF149-204ENST00000478404 PRKAR2AP13861 404 aaKnown RBP14.84□□□□□ -0.03
RNF149-204ENST00000478404 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
RNF149-204ENST00000478404 LHX8Q68G74 356 aa14.82□□□□□ -0.04
RNF149-204ENST00000478404 GABBR2O75899 941 aa14.78□□□□□ -0.04
RNF149-204ENST00000478404 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
RNF149-204ENST00000478404 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
RNF149-204ENST00000478404 ATXN8OSP0DMR3 200 aa14.67□□□□□ -0.06
RNF149-204ENST00000478404 FBLN2P98095 1184 aa14.64□□□□□ -0.07
RNF149-204ENST00000478404 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
RNF149-204ENST00000478404 ZNF692Q9BU19 519 aaPredicted RBP14.5□□□□□ -0.09
RNF149-204ENST00000478404 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
RNF149-204ENST00000478404 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
RNF149-204ENST00000478404 CHADLQ6NUI6 762 aa14.49□□□□□ -0.09
RNF149-204ENST00000478404 CLCN6P51797 869 aa14.39□□□□□ -0.11
RNF149-204ENST00000478404 PRR29P0C7W0 189 aa14.38□□□□□ -0.11
RNF149-204ENST00000478404 PLSCR2Q9NRY7 297 aa14.37□□□□□ -0.11
RNF149-204ENST00000478404 CD44P16070 742 aaKnown RBP14.32□□□□□ -0.12
RNF149-204ENST00000478404 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
RNF149-204ENST00000478404 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
RNF149-204ENST00000478404 DCBLD2Q96PD2 775 aa14.19□□□□□ -0.14
RNF149-204ENST00000478404 ZNF579Q8NAF0 562 aaKnown RBP14.12□□□□□ -0.15
RNF149-204ENST00000478404 FKBP8Q14318 412 aa14.09□□□□□ -0.15
RNF149-204ENST00000478404 OTUD5Q96G74 571 aa14.08□□□□□ -0.16
RNF149-204ENST00000478404 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
RNF149-204ENST00000478404 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
RNF149-204ENST00000478404 POTEMA6NI47 508 aa13.97□□□□□ -0.17
RNF149-204ENST00000478404 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
RNF149-204ENST00000478404 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
RNF149-204ENST00000478404 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
RNF149-204ENST00000478404 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
RNF149-204ENST00000478404 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
RNF149-204ENST00000478404 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
RNF149-204ENST00000478404 PHF12Q96QT6 1004 aa13.74□□□□□ -0.21
RNF149-204ENST00000478404 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
RNF149-204ENST00000478404 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
RNF149-204ENST00000478404 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
RNF149-204ENST00000478404 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms