RNA–Protein interactions for RNA: ENST00000478004.1

PSMF1-208, Transcript of proteasome inhibitor subunit 1, humanhuman

TSL 2

Gene PSMF1, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-208ENST00000478004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.53
PSMF1-208ENST00000478004 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
PSMF1-208ENST00000478004 FANCAO15360 1455 aa18.34■□□□□ 0.53
PSMF1-208ENST00000478004 DENND4BO75064 1496 aaPredicted RBP18.34■□□□□ 0.53
PSMF1-208ENST00000478004 FRMPD1Q5SYB0 1578 aa18.34■□□□□ 0.53
PSMF1-208ENST00000478004 RICTORQ6R327 1708 aa18.33■□□□□ 0.52
PSMF1-208ENST00000478004 RAPGEF3O95398 923 aa18.33■□□□□ 0.52
PSMF1-208ENST00000478004 ADAMTSL3P82987 1691 aa18.33■□□□□ 0.52
PSMF1-208ENST00000478004 ARHGEF40Q8TER5 1519 aa18.32■□□□□ 0.52
PSMF1-208ENST00000478004 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
PSMF1-208ENST00000478004 BCORL1Q5H9F3 1711 aa18.31■□□□□ 0.52
PSMF1-208ENST00000478004 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
PSMF1-208ENST00000478004 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
PSMF1-208ENST00000478004 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
PSMF1-208ENST00000478004 ZMYM4Q5VZL5 1548 aa18.28■□□□□ 0.52
PSMF1-208ENST00000478004 GPATCH8Q9UKJ3 1502 aaKnown RBP18.28■□□□□ 0.52
PSMF1-208ENST00000478004 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.52
PSMF1-208ENST00000478004 ITSN2Q9NZM3 1697 aa18.27■□□□□ 0.52
PSMF1-208ENST00000478004 PTPRMP28827 1452 aa18.26■□□□□ 0.51
PSMF1-208ENST00000478004 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
PSMF1-208ENST00000478004 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
PSMF1-208ENST00000478004 POGZQ7Z3K3 1410 aa18.26■□□□□ 0.51
PSMF1-208ENST00000478004 CCNB3Q8WWL7 1395 aa18.25■□□□□ 0.51
PSMF1-208ENST00000478004 PTPN23Q9H3S7 1636 aa18.24■□□□□ 0.51
PSMF1-208ENST00000478004 PLCH2O75038 1416 aa18.23■□□□□ 0.51
PSMF1-208ENST00000478004 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
PSMF1-208ENST00000478004 ZFYVE16Q7Z3T8 1539 aa18.23■□□□□ 0.51
PSMF1-208ENST00000478004 MADDQ8WXG6 1647 aa18.23■□□□□ 0.51
PSMF1-208ENST00000478004 RRBP1Q9P2E9 1410 aaKnown RBP18.23■□□□□ 0.51
PSMF1-208ENST00000478004 SAMD9LQ8IVG5 1584 aa18.22■□□□□ 0.51
PSMF1-208ENST00000478004 ZNF644Q9H582 1327 aaPredicted RBP18.21■□□□□ 0.51
PSMF1-208ENST00000478004 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
PSMF1-208ENST00000478004 ARHGAP5Q13017 1502 aa18.18■□□□□ 0.5
PSMF1-208ENST00000478004 CAMSAP2Q08AD1 1489 aa18.18■□□□□ 0.5
PSMF1-208ENST00000478004 SCAPERQ9BY12 1400 aa18.17■□□□□ 0.5
PSMF1-208ENST00000478004 EFCAB2Q5VUJ9 269 aa18.17■□□□□ 0.5
PSMF1-208ENST00000478004 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
PSMF1-208ENST00000478004 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
PSMF1-208ENST00000478004 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
PSMF1-208ENST00000478004 ZNF518AQ6AHZ1 1483 aa18.14■□□□□ 0.5
PSMF1-208ENST00000478004 MIA2Q96PC5 1412 aa18.14■□□□□ 0.49
PSMF1-208ENST00000478004 ARHGEF12Q9NZN5 1544 aa18.13■□□□□ 0.49
PSMF1-208ENST00000478004 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
PSMF1-208ENST00000478004 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
PSMF1-208ENST00000478004 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
PSMF1-208ENST00000478004 ZNF777Q9ULD5 760 aaPredicted RBP18.12■□□□□ 0.49
PSMF1-208ENST00000478004 C9orf84Q5VXU9 1444 aa18.12■□□□□ 0.49
PSMF1-208ENST00000478004 YEATS2Q9ULM3 1422 aa18.12■□□□□ 0.49
PSMF1-208ENST00000478004 ABCC1P33527 1531 aa18.12■□□□□ 0.49
PSMF1-208ENST00000478004 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
PSMF1-208ENST00000478004 PTPRKQ15262 1439 aa18.11■□□□□ 0.49
PSMF1-208ENST00000478004 CROCC2H7BZ55 1655 aa18.1■□□□□ 0.49
PSMF1-208ENST00000478004 ATP10AO60312 1499 aa18.1■□□□□ 0.49
PSMF1-208ENST00000478004 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
PSMF1-208ENST00000478004 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
PSMF1-208ENST00000478004 KDM5CP41229 1560 aa18.08■□□□□ 0.49
PSMF1-208ENST00000478004 LMTK3Q96Q04 1460 aa18.08■□□□□ 0.49
PSMF1-208ENST00000478004 ITGAEP38570 1179 aa18.08■□□□□ 0.48
PSMF1-208ENST00000478004 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
PSMF1-208ENST00000478004 MBD5Q9P267 1494 aa18.05■□□□□ 0.48
PSMF1-208ENST00000478004 ABCC5O15440 1437 aa18.04■□□□□ 0.48
PSMF1-208ENST00000478004 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
PSMF1-208ENST00000478004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
PSMF1-208ENST00000478004 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
PSMF1-208ENST00000478004 DAPK1P53355 1430 aa18.03■□□□□ 0.48
PSMF1-208ENST00000478004 TRAPPC8Q9Y2L5 1435 aa18.03■□□□□ 0.48
PSMF1-208ENST00000478004 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.48
PSMF1-208ENST00000478004 ARHGEF5Q12774 1597 aa18.02■□□□□ 0.48
PSMF1-208ENST00000478004 MYT1LQ9UL68 1186 aa18.02■□□□□ 0.48
PSMF1-208ENST00000478004 MLECQ14165 292 aa18.01■□□□□ 0.47
PSMF1-208ENST00000478004 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
PSMF1-208ENST00000478004 PREX1Q8TCU6 1659 aa18■□□□□ 0.47
PSMF1-208ENST00000478004 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
PSMF1-208ENST00000478004 KIAA1107Q9UPP5 1409 aa17.99■□□□□ 0.47
PSMF1-208ENST00000478004 FBXO41Q8TF61 875 aa17.99■□□□□ 0.47
PSMF1-208ENST00000478004 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
PSMF1-208ENST00000478004 CCDC141Q6ZP82 1450 aa17.97■□□□□ 0.47
PSMF1-208ENST00000478004 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
PSMF1-208ENST00000478004 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
PSMF1-208ENST00000478004 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
PSMF1-208ENST00000478004 ABCA6Q8N139 1617 aa17.96■□□□□ 0.47
PSMF1-208ENST00000478004 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
PSMF1-208ENST00000478004 AGLP35573 1532 aa17.95■□□□□ 0.46
PSMF1-208ENST00000478004 RSPH4AQ5TD94 716 aa17.95■□□□□ 0.46
PSMF1-208ENST00000478004 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
PSMF1-208ENST00000478004 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
PSMF1-208ENST00000478004 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
PSMF1-208ENST00000478004 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
PSMF1-208ENST00000478004 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
PSMF1-208ENST00000478004 KIDINS220Q9ULH0 1771 aa17.91■□□□□ 0.46
PSMF1-208ENST00000478004 TSPY4P0CV99 314 aa17.91■□□□□ 0.46
PSMF1-208ENST00000478004 TSPY10P0CW01 314 aa17.91■□□□□ 0.46
PSMF1-208ENST00000478004 HSPA2P54652 639 aa17.91■□□□□ 0.46
PSMF1-208ENST00000478004 UHRF1BP1Q6BDS2 1440 aa17.9■□□□□ 0.46
PSMF1-208ENST00000478004 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.46
PSMF1-208ENST00000478004 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
PSMF1-208ENST00000478004 RRP7BPQ9NSQ0 103 aa17.88■□□□□ 0.45
PSMF1-208ENST00000478004 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
PSMF1-208ENST00000478004 C3P01024 1663 aa17.87■□□□□ 0.45
PSMF1-208ENST00000478004 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms