RNA–Protein interactions for RNA: ENST00000478004.1

PSMF1-208, Transcript of proteasome inhibitor subunit 1, humanhuman

TSL 2

Gene PSMF1, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-208ENST00000478004 NISCHQ9Y2I1 1504 aa27.94■■■□□ 2.06
PSMF1-208ENST00000478004 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
PSMF1-208ENST00000478004 ABCC9O60706 1549 aa24.81■■□□□ 1.56
PSMF1-208ENST00000478004 RB1CC1Q8TDY2 1594 aa23.77■■□□□ 1.4
PSMF1-208ENST00000478004 NACADO15069 1562 aa23.61■■□□□ 1.37
PSMF1-208ENST00000478004 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
PSMF1-208ENST00000478004 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
PSMF1-208ENST00000478004 MYO15BQ96JP2 1530 aa23.31■■□□□ 1.32
PSMF1-208ENST00000478004 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
PSMF1-208ENST00000478004 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
PSMF1-208ENST00000478004 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
PSMF1-208ENST00000478004 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
PSMF1-208ENST00000478004 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
PSMF1-208ENST00000478004 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
PSMF1-208ENST00000478004 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
PSMF1-208ENST00000478004 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
PSMF1-208ENST00000478004 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
PSMF1-208ENST00000478004 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
PSMF1-208ENST00000478004 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
PSMF1-208ENST00000478004 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
PSMF1-208ENST00000478004 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
PSMF1-208ENST00000478004 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
PSMF1-208ENST00000478004 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
PSMF1-208ENST00000478004 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
PSMF1-208ENST00000478004 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
PSMF1-208ENST00000478004 CUX2O14529 1486 aa21.52■■□□□ 1.04
PSMF1-208ENST00000478004 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
PSMF1-208ENST00000478004 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
PSMF1-208ENST00000478004 WIZO95785 1651 aa21.49■■□□□ 1.03
PSMF1-208ENST00000478004 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
PSMF1-208ENST00000478004 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
PSMF1-208ENST00000478004 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
PSMF1-208ENST00000478004 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
PSMF1-208ENST00000478004 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
PSMF1-208ENST00000478004 NESP48681 1621 aa21.28■■□□□ 1
PSMF1-208ENST00000478004 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
PSMF1-208ENST00000478004 TOP2AP11388 1531 aaKnown RBP21.17■□□□□ 0.98
PSMF1-208ENST00000478004 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
PSMF1-208ENST00000478004 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
PSMF1-208ENST00000478004 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
PSMF1-208ENST00000478004 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
PSMF1-208ENST00000478004 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
PSMF1-208ENST00000478004 WDR62O43379 1518 aa20.9■□□□□ 0.94
PSMF1-208ENST00000478004 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
PSMF1-208ENST00000478004 CFTRP13569 1480 aa20.82■□□□□ 0.92
PSMF1-208ENST00000478004 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
PSMF1-208ENST00000478004 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
PSMF1-208ENST00000478004 URB2Q14146 1524 aaKnown RBP20.6■□□□□ 0.89
PSMF1-208ENST00000478004 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
PSMF1-208ENST00000478004 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
PSMF1-208ENST00000478004 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
PSMF1-208ENST00000478004 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
PSMF1-208ENST00000478004 TOPBP1Q92547 1522 aa20.42■□□□□ 0.86
PSMF1-208ENST00000478004 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
PSMF1-208ENST00000478004 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
PSMF1-208ENST00000478004 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
PSMF1-208ENST00000478004 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
PSMF1-208ENST00000478004 CUX1P39880 1505 aa20.27■□□□□ 0.84
PSMF1-208ENST00000478004 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
PSMF1-208ENST00000478004 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
PSMF1-208ENST00000478004 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
PSMF1-208ENST00000478004 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
PSMF1-208ENST00000478004 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
PSMF1-208ENST00000478004 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
PSMF1-208ENST00000478004 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
PSMF1-208ENST00000478004 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
PSMF1-208ENST00000478004 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
PSMF1-208ENST00000478004 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
PSMF1-208ENST00000478004 CHD1O14646 1710 aa20.16■□□□□ 0.82
PSMF1-208ENST00000478004 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.811e-6■■■■■ 27.8
PSMF1-208ENST00000478004 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
PSMF1-208ENST00000478004 SOGA1O94964 1423 aa20.11■□□□□ 0.81
PSMF1-208ENST00000478004 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
PSMF1-208ENST00000478004 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
PSMF1-208ENST00000478004 FBLN2P98095 1184 aa20.04■□□□□ 0.8
PSMF1-208ENST00000478004 MAGI1Q96QZ7 1491 aaPredicted RBP20.02■□□□□ 0.8
PSMF1-208ENST00000478004 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
PSMF1-208ENST00000478004 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
PSMF1-208ENST00000478004 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
PSMF1-208ENST00000478004 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
PSMF1-208ENST00000478004 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
PSMF1-208ENST00000478004 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
PSMF1-208ENST00000478004 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
PSMF1-208ENST00000478004 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
PSMF1-208ENST00000478004 CLASP1Q7Z460 1538 aa19.91■□□□□ 0.78
PSMF1-208ENST00000478004 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
PSMF1-208ENST00000478004 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
PSMF1-208ENST00000478004 ABCA10Q8WWZ4 1543 aa19.89■□□□□ 0.77
PSMF1-208ENST00000478004 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
PSMF1-208ENST00000478004 FAM9AQ8IZU1 332 aaPredicted RBP19.81■□□□□ 0.76
PSMF1-208ENST00000478004 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
PSMF1-208ENST00000478004 ADAMTS12P58397 1594 aa19.71■□□□□ 0.75
PSMF1-208ENST00000478004 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
PSMF1-208ENST00000478004 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
PSMF1-208ENST00000478004 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
PSMF1-208ENST00000478004 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
PSMF1-208ENST00000478004 EEA1Q15075 1411 aa19.64■□□□□ 0.73
PSMF1-208ENST00000478004 NUP160Q12769 1436 aa19.63■□□□□ 0.73
PSMF1-208ENST00000478004 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
PSMF1-208ENST00000478004 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms