RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 KANK4Q5T7N3 995 aaPredicted RBP23.93■■□□□ 1.42
SEC13-215ENST00000477547 FBXO41Q8TF61 875 aa23.93■■□□□ 1.42
SEC13-215ENST00000477547 CDC42BPBQ9Y5S2 1711 aa23.93■■□□□ 1.42
SEC13-215ENST00000477547 CFAP74Q9C0B2 1584 aa23.91■■□□□ 1.42
SEC13-215ENST00000477547 ARAP3Q8WWN8 1544 aa23.88■■□□□ 1.41
SEC13-215ENST00000477547 ARHGAP5Q13017 1502 aa23.85■■□□□ 1.41
SEC13-215ENST00000477547 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.41
SEC13-215ENST00000477547 GPATCH8Q9UKJ3 1502 aaKnown RBP23.82■■□□□ 1.4
SEC13-215ENST00000477547 PLCH2O75038 1416 aa23.81■■□□□ 1.4
SEC13-215ENST00000477547 FANCAO15360 1455 aa23.8■■□□□ 1.4
SEC13-215ENST00000477547 MYOM3Q5VTT5 1437 aa23.78■■□□□ 1.4
SEC13-215ENST00000477547 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
SEC13-215ENST00000477547 SAMD9LQ8IVG5 1584 aa23.77■■□□□ 1.4
SEC13-215ENST00000477547 NEO1Q92859 1461 aa23.76■■□□□ 1.39
SEC13-215ENST00000477547 PHLDB1Q86UU1 1377 aa23.76■■□□□ 1.39
SEC13-215ENST00000477547 PTPRMP28827 1452 aa23.75■■□□□ 1.39
SEC13-215ENST00000477547 ABCC1P33527 1531 aa23.74■■□□□ 1.39
SEC13-215ENST00000477547 ADAMTSL3P82987 1691 aa23.72■■□□□ 1.39
SEC13-215ENST00000477547 PTPN23Q9H3S7 1636 aa23.72■■□□□ 1.39
SEC13-215ENST00000477547 CAMSAP2Q08AD1 1489 aa23.71■■□□□ 1.39
SEC13-215ENST00000477547 FGD6Q6ZV73 1430 aa23.69■■□□□ 1.38
SEC13-215ENST00000477547 MIA2Q96PC5 1412 aa23.69■■□□□ 1.38
SEC13-215ENST00000477547 SYCP2Q9BX26 1530 aa23.68■■□□□ 1.38
SEC13-215ENST00000477547 RICTORQ6R327 1708 aa23.68■■□□□ 1.38
SEC13-215ENST00000477547 AKNAQ7Z591 1439 aa23.68■■□□□ 1.38
SEC13-215ENST00000477547 RAPGEF3O95398 923 aa23.67■■□□□ 1.38
SEC13-215ENST00000477547 CFDP1Q9UEE9 299 aaPredicted RBP23.67■■□□□ 1.38
SEC13-215ENST00000477547 EFCAB2Q5VUJ9 269 aa23.66■■□□□ 1.38
SEC13-215ENST00000477547 FRMPD1Q5SYB0 1578 aa23.65■■□□□ 1.38
SEC13-215ENST00000477547 PLEKHH2Q8IVE3 1493 aa23.65■■□□□ 1.38
SEC13-215ENST00000477547 ZNF777Q9ULD5 760 aaPredicted RBP23.62■■□□□ 1.37
SEC13-215ENST00000477547 TCOF1Q13428 1488 aaKnown RBP23.62■■□□□ 1.37
SEC13-215ENST00000477547 CROCC2H7BZ55 1655 aa23.62■■□□□ 1.37
SEC13-215ENST00000477547 MADDQ8WXG6 1647 aa23.62■■□□□ 1.37
SEC13-215ENST00000477547 BCORL1Q5H9F3 1711 aa23.61■■□□□ 1.37
SEC13-215ENST00000477547 ARID4BQ4LE39 1312 aaPredicted RBP23.6■■□□□ 1.37
SEC13-215ENST00000477547 LMTK3Q96Q04 1460 aa23.6■■□□□ 1.37
SEC13-215ENST00000477547 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
SEC13-215ENST00000477547 POGZQ7Z3K3 1410 aa23.59■■□□□ 1.37
SEC13-215ENST00000477547 SCAPERQ9BY12 1400 aa23.59■■□□□ 1.37
SEC13-215ENST00000477547 DENND4BO75064 1496 aaPredicted RBP23.59■■□□□ 1.37
SEC13-215ENST00000477547 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
SEC13-215ENST00000477547 DNMT1P26358 1616 aaKnown RBP23.58■■□□□ 1.37
SEC13-215ENST00000477547 KIAA1107Q9UPP5 1409 aa23.56■■□□□ 1.36
SEC13-215ENST00000477547 KDM5CP41229 1560 aa23.56■■□□□ 1.36
SEC13-215ENST00000477547 ZMYM4Q5VZL5 1548 aa23.56■■□□□ 1.36
SEC13-215ENST00000477547 ZNF518AQ6AHZ1 1483 aa23.56■■□□□ 1.36
SEC13-215ENST00000477547 ZNF644Q9H582 1327 aaPredicted RBP23.56■■□□□ 1.36
SEC13-215ENST00000477547 RRBP1Q9P2E9 1410 aaKnown RBP23.56■■□□□ 1.36
SEC13-215ENST00000477547 CCDC141Q6ZP82 1450 aa23.54■■□□□ 1.36
SEC13-215ENST00000477547 HSPA2P54652 639 aa23.53■■□□□ 1.36
SEC13-215ENST00000477547 MBD5Q9P267 1494 aa23.52■■□□□ 1.36
SEC13-215ENST00000477547 TRAPPC8Q9Y2L5 1435 aa23.52■■□□□ 1.36
SEC13-215ENST00000477547 INO80Q9ULG1 1556 aaPredicted RBP23.52■■□□□ 1.36
SEC13-215ENST00000477547 RIMS1Q86UR5 1692 aaKnown RBP23.51■■□□□ 1.35
SEC13-215ENST00000477547 PLPPR3Q6T4P5 718 aa23.51■■□□□ 1.35
SEC13-215ENST00000477547 ADGBQ8N7X0 1667 aa23.5■■□□□ 1.35
SEC13-215ENST00000477547 ZFYVE16Q7Z3T8 1539 aa23.48■■□□□ 1.35
SEC13-215ENST00000477547 ARHGEF40Q8TER5 1519 aa23.48■■□□□ 1.35
SEC13-215ENST00000477547 KIDINS220Q9ULH0 1771 aa23.47■■□□□ 1.35
SEC13-215ENST00000477547 MAST1Q9Y2H9 1570 aa23.47■■□□□ 1.35
SEC13-215ENST00000477547 FAM50AQ14320 339 aaKnown RBP23.47■■□□□ 1.35
SEC13-215ENST00000477547 DAPK1P53355 1430 aa23.46■■□□□ 1.35
SEC13-215ENST00000477547 HNRNPMP52272 730 aaKnown RBP eCLIP23.46■■□□□ 1.35
SEC13-215ENST00000477547 ATP7AQ04656 1500 aa23.46■■□□□ 1.35
SEC13-215ENST00000477547 SHANK2Q9UPX8 1470 aa23.46■■□□□ 1.35
SEC13-215ENST00000477547 ABCA6Q8N139 1617 aa23.45■■□□□ 1.34
SEC13-215ENST00000477547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.44■■□□□ 1.34
SEC13-215ENST00000477547 CERKQ8TCT0 537 aa23.41■■□□□ 1.34
SEC13-215ENST00000477547 ABCC5O15440 1437 aa23.41■■□□□ 1.34
SEC13-215ENST00000477547 PLXNC1O60486 1568 aa23.41■■□□□ 1.34
SEC13-215ENST00000477547 DIP2CQ9Y2E4 1556 aa23.41■■□□□ 1.34
SEC13-215ENST00000477547 MLH3Q9UHC1 1453 aa23.41■■□□□ 1.34
SEC13-215ENST00000477547 C9orf84Q5VXU9 1444 aa23.4■■□□□ 1.34
SEC13-215ENST00000477547 MAGI2Q86UL8 1455 aa23.4■■□□□ 1.34
SEC13-215ENST00000477547 AFAP1Q8N556 730 aa23.39■■□□□ 1.34
SEC13-215ENST00000477547 SIGLEC1Q9BZZ2 1709 aa23.36■■□□□ 1.33
SEC13-215ENST00000477547 RSPH4AQ5TD94 716 aa23.36■■□□□ 1.33
SEC13-215ENST00000477547 SPAG9O60271 1321 aaKnown RBP23.36■■□□□ 1.33
SEC13-215ENST00000477547 YEATS2Q9ULM3 1422 aa23.36■■□□□ 1.33
SEC13-215ENST00000477547 RTEL1-TNFRSF6BF6WH68 1400 aa23.34■■□□□ 1.33
SEC13-215ENST00000477547 MLECQ14165 292 aa23.33■■□□□ 1.32
SEC13-215ENST00000477547 ILDR2Q71H61 639 aa23.33■■□□□ 1.32
SEC13-215ENST00000477547 ADGRL2O95490 1459 aa23.32■■□□□ 1.32
SEC13-215ENST00000477547 MYT1LQ9UL68 1186 aa23.32■■□□□ 1.32
SEC13-215ENST00000477547 GCC2Q8IWJ2 1684 aa23.31■■□□□ 1.32
SEC13-215ENST00000477547 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
SEC13-215ENST00000477547 PTPRKQ15262 1439 aa23.31■■□□□ 1.32
SEC13-215ENST00000477547 TSPY4P0CV99 314 aa23.3■■□□□ 1.32
SEC13-215ENST00000477547 TSPY10P0CW01 314 aa23.3■■□□□ 1.32
SEC13-215ENST00000477547 ITGAEP38570 1179 aa23.29■■□□□ 1.32
SEC13-215ENST00000477547 DISP3Q9P2K9 1392 aa23.28■■□□□ 1.32
SEC13-215ENST00000477547 FER1L4A9Z1Z3 1794 aa23.25■■□□□ 1.31
SEC13-215ENST00000477547 ATP10AO60312 1499 aa23.25■■□□□ 1.31
SEC13-215ENST00000477547 ANKRD30AQ9BXX3 1397 aa23.24■■□□□ 1.31
SEC13-215ENST00000477547 EIF2AK4Q9P2K8 1649 aaKnown RBP23.24■■□□□ 1.31
SEC13-215ENST00000477547 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
SEC13-215ENST00000477547 A2MP01023 1474 aa23.23■■□□□ 1.31
SEC13-215ENST00000477547 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
SEC13-215ENST00000477547 KIF15Q9NS87 1388 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms