RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 KIF21BO75037 1637 aa13.62□□□□□ -0.23
KPNA1-206ENST00000476916 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
KPNA1-206ENST00000476916 GLI2P10070 1586 aa13.58□□□□□ -0.24
KPNA1-206ENST00000476916 SOGA1O94964 1423 aa13.57□□□□□ -0.24
KPNA1-206ENST00000476916 IFFO2Q5TF58 517 aa13.57□□□□□ -0.24
KPNA1-206ENST00000476916 IQSEC2Q5JU85 1478 aa13.56□□□□□ -0.24
KPNA1-206ENST00000476916 NUP160Q12769 1436 aa13.54□□□□□ -0.24
KPNA1-206ENST00000476916 PRG4Q92954 1404 aaPredicted RBP13.53□□□□□ -0.24
KPNA1-206ENST00000476916 GSE1Q14687 1217 aa13.52□□□□□ -0.25
KPNA1-206ENST00000476916 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.25
KPNA1-206ENST00000476916 WIZO95785 1651 aa13.52□□□□□ -0.25
KPNA1-206ENST00000476916 GRIN2AQ12879 1464 aa13.5□□□□□ -0.25
KPNA1-206ENST00000476916 TEX14Q8IWB6 1497 aa13.5□□□□□ -0.25
KPNA1-206ENST00000476916 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
KPNA1-206ENST00000476916 PBRM1Q86U86 1689 aa13.49□□□□□ -0.25
KPNA1-206ENST00000476916 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
KPNA1-206ENST00000476916 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
KPNA1-206ENST00000476916 NUBP1P53384 320 aa13.47□□□□□ -0.25
KPNA1-206ENST00000476916 MADDQ8WXG6 1647 aa13.46□□□□□ -0.25
KPNA1-206ENST00000476916 MAP3K4Q9Y6R4 1608 aa13.45□□□□□ -0.26
KPNA1-206ENST00000476916 YEATS2Q9ULM3 1422 aa13.41□□□□□ -0.26
KPNA1-206ENST00000476916 STRCQ7RTU9 1775 aa13.41□□□□□ -0.26
KPNA1-206ENST00000476916 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
KPNA1-206ENST00000476916 HOMEZQ8IX15 550 aa13.41□□□□□ -0.26
KPNA1-206ENST00000476916 BCORL1Q5H9F3 1711 aa13.4□□□□□ -0.26
KPNA1-206ENST00000476916 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
KPNA1-206ENST00000476916 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
KPNA1-206ENST00000476916 HSPA1LP34931 641 aa13.39□□□□□ -0.27
KPNA1-206ENST00000476916 PLB1Q6P1J6 1458 aa13.39□□□□□ -0.27
KPNA1-206ENST00000476916 PTPRTO14522 1441 aa13.39□□□□□ -0.27
KPNA1-206ENST00000476916 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
KPNA1-206ENST00000476916 GTPBP6O43824 516 aaPredicted RBP13.37□□□□□ -0.27
KPNA1-206ENST00000476916 KIAA0586Q9BVV6 1533 aa13.37□□□□□ -0.27
KPNA1-206ENST00000476916 DCAF8Q5TAQ9 597 aa13.36□□□□□ -0.27
KPNA1-206ENST00000476916 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
KPNA1-206ENST00000476916 RIMS1Q86UR5 1692 aaKnown RBP13.36□□□□□ -0.27
KPNA1-206ENST00000476916 RGS17Q9UGC6 210 aaPredicted RBP13.34□□□□□ -0.27
KPNA1-206ENST00000476916 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
KPNA1-206ENST00000476916 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
KPNA1-206ENST00000476916 C14orf37Q86TY3 774 aa13.31□□□□□ -0.28
KPNA1-206ENST00000476916 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
KPNA1-206ENST00000476916 EPRSP07814 1512 aaKnown RBP13.3□□□□□ -0.28
KPNA1-206ENST00000476916 VGFO15240 615 aaPredicted RBP13.3□□□□□ -0.28
KPNA1-206ENST00000476916 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
KPNA1-206ENST00000476916 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
KPNA1-206ENST00000476916 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
KPNA1-206ENST00000476916 STK25O00506 426 aa13.27□□□□□ -0.29
KPNA1-206ENST00000476916 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
KPNA1-206ENST00000476916 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
KPNA1-206ENST00000476916 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
KPNA1-206ENST00000476916 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
KPNA1-206ENST00000476916 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
KPNA1-206ENST00000476916 SETD1AO15047 1707 aaKnown RBP13.23□□□□□ -0.29
KPNA1-206ENST00000476916 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
KPNA1-206ENST00000476916 TOP2AP11388 1531 aaKnown RBP13.22□□□□□ -0.29
KPNA1-206ENST00000476916 PREX1Q8TCU6 1659 aa13.21□□□□□ -0.3
KPNA1-206ENST00000476916 ARID4BQ4LE39 1312 aaPredicted RBP13.19□□□□□ -0.3
KPNA1-206ENST00000476916 CUL7Q14999 1698 aa13.19□□□□□ -0.3
KPNA1-206ENST00000476916 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
KPNA1-206ENST00000476916 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
KPNA1-206ENST00000476916 RYDENQ9NUL5 291 aaKnown RBP13.19□□□□□ -0.3
KPNA1-206ENST00000476916 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
KPNA1-206ENST00000476916 POTEAQ6S8J7 498 aa13.17□□□□□ -0.3
KPNA1-206ENST00000476916 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
KPNA1-206ENST00000476916 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
KPNA1-206ENST00000476916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
KPNA1-206ENST00000476916 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
KPNA1-206ENST00000476916 BCL11BQ9C0K0 894 aaPredicted RBP13.16□□□□□ -0.3
KPNA1-206ENST00000476916 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
KPNA1-206ENST00000476916 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
KPNA1-206ENST00000476916 STK24Q9Y6E0 443 aa13.15□□□□□ -0.3
KPNA1-206ENST00000476916 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
KPNA1-206ENST00000476916 PIP4K2BP78356 416 aa13.13□□□□□ -0.31
KPNA1-206ENST00000476916 RUSC2Q8N2Y8 1516 aa13.13□□□□□ -0.31
KPNA1-206ENST00000476916 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
KPNA1-206ENST00000476916 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
KPNA1-206ENST00000476916 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
KPNA1-206ENST00000476916 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
KPNA1-206ENST00000476916 PTPRGP23470 1445 aa13.07□□□□□ -0.32
KPNA1-206ENST00000476916 PYGBP11216 843 aa13.07□□□□□ -0.32
KPNA1-206ENST00000476916 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
KPNA1-206ENST00000476916 CD109Q6YHK3 1445 aa13.06□□□□□ -0.32
KPNA1-206ENST00000476916 ZNF335Q9H4Z2 1342 aaPredicted RBP13.06□□□□□ -0.32
KPNA1-206ENST00000476916 CUX1P39880 1505 aa13.05□□□□□ -0.32
KPNA1-206ENST00000476916 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
KPNA1-206ENST00000476916 P3H3Q8IVL6 736 aa13.03□□□□□ -0.32
KPNA1-206ENST00000476916 TOM1O60784 492 aa13.02□□□□□ -0.33
KPNA1-206ENST00000476916 UHRF1BP1Q6BDS2 1440 aa13.02□□□□□ -0.33
KPNA1-206ENST00000476916 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
KPNA1-206ENST00000476916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.99□□□□□ -0.33
KPNA1-206ENST00000476916 FER1L4A9Z1Z3 1794 aa12.99□□□□□ -0.33
KPNA1-206ENST00000476916 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
KPNA1-206ENST00000476916 BRPF1P55201 1214 aaPredicted RBP12.97□□□□□ -0.33
KPNA1-206ENST00000476916 WDR7Q9Y4E6 1490 aa12.97□□□□□ -0.33
KPNA1-206ENST00000476916 NCOA1Q15788 1441 aa12.96□□□□□ -0.33
KPNA1-206ENST00000476916 POGZQ7Z3K3 1410 aa12.96□□□□□ -0.33
KPNA1-206ENST00000476916 TTBK1Q5TCY1 1321 aaPredicted RBP12.96□□□□□ -0.33
KPNA1-206ENST00000476916 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
KPNA1-206ENST00000476916 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
KPNA1-206ENST00000476916 RAPGEF3O95398 923 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms