RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 BCORL1Q5H9F3 1711 aa24.71■■□□□ 1.55
PSMD4-211ENST00000476855 CDK11AQ9UQ88 783 aaPredicted RBP24.7■■□□□ 1.54
PSMD4-211ENST00000476855 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
PSMD4-211ENST00000476855 MADDQ8WXG6 1647 aa24.68■■□□□ 1.54
PSMD4-211ENST00000476855 LMTK3Q96Q04 1460 aa24.68■■□□□ 1.54
PSMD4-211ENST00000476855 FRMPD1Q5SYB0 1578 aa24.67■■□□□ 1.54
PSMD4-211ENST00000476855 PLEKHD1A6NEE1 506 aa24.66■■□□□ 1.54
PSMD4-211ENST00000476855 NCOA2Q15596 1464 aa24.65■■□□□ 1.54
PSMD4-211ENST00000476855 CDC42BPAQ5VT25 1732 aa24.65■■□□□ 1.54
PSMD4-211ENST00000476855 TTC37Q6PGP7 1564 aa24.63■■□□□ 1.53
PSMD4-211ENST00000476855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.61■■□□□ 1.53
PSMD4-211ENST00000476855 ITSN2Q9NZM3 1697 aa24.61■■□□□ 1.53
PSMD4-211ENST00000476855 MYO5CQ9NQX4 1742 aa24.6■■□□□ 1.53
PSMD4-211ENST00000476855 ARHGEF40Q8TER5 1519 aa24.59■■□□□ 1.53
PSMD4-211ENST00000476855 CDC42BPBQ9Y5S2 1711 aa24.58■■□□□ 1.52
PSMD4-211ENST00000476855 DENND4BO75064 1496 aaPredicted RBP24.58■■□□□ 1.52
PSMD4-211ENST00000476855 RIMS1Q86UR5 1692 aaKnown RBP24.57■■□□□ 1.52
PSMD4-211ENST00000476855 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
PSMD4-211ENST00000476855 HSPA2P54652 639 aa24.55■■□□□ 1.52
PSMD4-211ENST00000476855 AKNAQ7Z591 1439 aa24.53■■□□□ 1.52
PSMD4-211ENST00000476855 RICTORQ6R327 1708 aa24.53■■□□□ 1.52
PSMD4-211ENST00000476855 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
PSMD4-211ENST00000476855 FANCAO15360 1455 aa24.51■■□□□ 1.51
PSMD4-211ENST00000476855 PLPPR3Q6T4P5 718 aa24.51■■□□□ 1.51
PSMD4-211ENST00000476855 MYOM3Q5VTT5 1437 aa24.5■■□□□ 1.51
PSMD4-211ENST00000476855 GPATCH8Q9UKJ3 1502 aaKnown RBP24.5■■□□□ 1.51
PSMD4-211ENST00000476855 CFAP74Q9C0B2 1584 aa24.49■■□□□ 1.51
PSMD4-211ENST00000476855 ZMYM4Q5VZL5 1548 aa24.46■■□□□ 1.51
PSMD4-211ENST00000476855 CCNB3Q8WWL7 1395 aa24.46■■□□□ 1.51
PSMD4-211ENST00000476855 RRBP1Q9P2E9 1410 aaKnown RBP24.45■■□□□ 1.51
PSMD4-211ENST00000476855 CERKQ8TCT0 537 aa24.45■■□□□ 1.5
PSMD4-211ENST00000476855 PTPN23Q9H3S7 1636 aa24.45■■□□□ 1.5
PSMD4-211ENST00000476855 ZFYVE16Q7Z3T8 1539 aa24.45■■□□□ 1.5
PSMD4-211ENST00000476855 FGD6Q6ZV73 1430 aa24.44■■□□□ 1.5
PSMD4-211ENST00000476855 YEATS2Q9ULM3 1422 aa24.44■■□□□ 1.5
PSMD4-211ENST00000476855 MAGI2Q86UL8 1455 aa24.43■■□□□ 1.5
PSMD4-211ENST00000476855 MIA2Q96PC5 1412 aa24.42■■□□□ 1.5
PSMD4-211ENST00000476855 MLECQ14165 292 aa24.41■■□□□ 1.5
PSMD4-211ENST00000476855 PLCH2O75038 1416 aa24.4■■□□□ 1.5
PSMD4-211ENST00000476855 SIGLEC1Q9BZZ2 1709 aa24.4■■□□□ 1.5
PSMD4-211ENST00000476855 TCOF1Q13428 1488 aaKnown RBP24.39■■□□□ 1.5
PSMD4-211ENST00000476855 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
PSMD4-211ENST00000476855 ARHGAP5Q13017 1502 aa24.37■■□□□ 1.49
PSMD4-211ENST00000476855 SCAPERQ9BY12 1400 aa24.35■■□□□ 1.49
PSMD4-211ENST00000476855 FER1L4A9Z1Z3 1794 aa24.34■■□□□ 1.49
PSMD4-211ENST00000476855 CAMSAP2Q08AD1 1489 aa24.33■■□□□ 1.49
PSMD4-211ENST00000476855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.31■■□□□ 1.48
PSMD4-211ENST00000476855 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
PSMD4-211ENST00000476855 ATP10AO60312 1499 aa24.3■■□□□ 1.48
PSMD4-211ENST00000476855 ABCC1P33527 1531 aa24.3■■□□□ 1.48
PSMD4-211ENST00000476855 ARHGEF12Q9NZN5 1544 aa24.3■■□□□ 1.48
PSMD4-211ENST00000476855 CROCC2H7BZ55 1655 aa24.29■■□□□ 1.48
PSMD4-211ENST00000476855 DNMT1P26358 1616 aaKnown RBP24.28■■□□□ 1.48
PSMD4-211ENST00000476855 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
PSMD4-211ENST00000476855 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
PSMD4-211ENST00000476855 ARHGEF5Q12774 1597 aa24.25■■□□□ 1.47
PSMD4-211ENST00000476855 PREX1Q8TCU6 1659 aa24.25■■□□□ 1.47
PSMD4-211ENST00000476855 ZNF644Q9H582 1327 aaPredicted RBP24.25■■□□□ 1.47
PSMD4-211ENST00000476855 SYCP2Q9BX26 1530 aa24.25■■□□□ 1.47
PSMD4-211ENST00000476855 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
PSMD4-211ENST00000476855 EFCAB2Q5VUJ9 269 aa24.24■■□□□ 1.47
PSMD4-211ENST00000476855 DMRT2Q9Y5R5 561 aa24.24■■□□□ 1.47
PSMD4-211ENST00000476855 PLEKHH2Q8IVE3 1493 aa24.23■■□□□ 1.47
PSMD4-211ENST00000476855 DISP3Q9P2K9 1392 aa24.21■■□□□ 1.47
PSMD4-211ENST00000476855 MBD5Q9P267 1494 aa24.2■■□□□ 1.47
PSMD4-211ENST00000476855 KIAA1107Q9UPP5 1409 aa24.2■■□□□ 1.46
PSMD4-211ENST00000476855 FAM50AQ14320 339 aaKnown RBP24.19■■□□□ 1.46
PSMD4-211ENST00000476855 ZNF777Q9ULD5 760 aaPredicted RBP24.19■■□□□ 1.46
PSMD4-211ENST00000476855 ADGBQ8N7X0 1667 aa24.18■■□□□ 1.46
PSMD4-211ENST00000476855 ILDR2Q71H61 639 aa24.17■■□□□ 1.46
PSMD4-211ENST00000476855 ZNF518AQ6AHZ1 1483 aa24.17■■□□□ 1.46
PSMD4-211ENST00000476855 UHRF1BP1Q6BDS2 1440 aa24.17■■□□□ 1.46
PSMD4-211ENST00000476855 DAPK1P53355 1430 aa24.16■■□□□ 1.46
PSMD4-211ENST00000476855 STRCQ7RTU9 1775 aa24.15■■□□□ 1.46
PSMD4-211ENST00000476855 ABCC5O15440 1437 aa24.15■■□□□ 1.46
PSMD4-211ENST00000476855 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
PSMD4-211ENST00000476855 MAST1Q9Y2H9 1570 aa24.13■■□□□ 1.45
PSMD4-211ENST00000476855 PTPRKQ15262 1439 aa24.13■■□□□ 1.45
PSMD4-211ENST00000476855 AFAP1Q8N556 730 aa24.13■■□□□ 1.45
PSMD4-211ENST00000476855 SOCS7O14512 581 aa24.12■■□□□ 1.45
PSMD4-211ENST00000476855 MYT1LQ9UL68 1186 aa24.12■■□□□ 1.45
PSMD4-211ENST00000476855 SHANK2Q9UPX8 1470 aa24.12■■□□□ 1.45
PSMD4-211ENST00000476855 TRAPPC8Q9Y2L5 1435 aa24.1■■□□□ 1.45
PSMD4-211ENST00000476855 HNRNPMP52272 730 aaKnown RBP eCLIP24.1■■□□□ 1.45
PSMD4-211ENST00000476855 KDM5CP41229 1560 aa24.1■■□□□ 1.45
PSMD4-211ENST00000476855 INO80Q9ULG1 1556 aaPredicted RBP24.08■■□□□ 1.44
PSMD4-211ENST00000476855 PTPRTO14522 1441 aa24.07■■□□□ 1.44
PSMD4-211ENST00000476855 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
PSMD4-211ENST00000476855 GCC2Q8IWJ2 1684 aa24.06■■□□□ 1.44
PSMD4-211ENST00000476855 DIP2CQ9Y2E4 1556 aa24.06■■□□□ 1.44
PSMD4-211ENST00000476855 REREQ9P2R6 1566 aa24.05■■□□□ 1.44
PSMD4-211ENST00000476855 ADGRL2O95490 1459 aa24.05■■□□□ 1.44
PSMD4-211ENST00000476855 KIDINS220Q9ULH0 1771 aa24.04■■□□□ 1.44
PSMD4-211ENST00000476855 RSPH4AQ5TD94 716 aa24.04■■□□□ 1.44
PSMD4-211ENST00000476855 PCGF6Q9BYE7 350 aa24.04■■□□□ 1.44
PSMD4-211ENST00000476855 ESF1Q9H501 851 aaKnown RBP24.04■■□□□ 1.44
PSMD4-211ENST00000476855 PLXNC1O60486 1568 aa24.03■■□□□ 1.44
PSMD4-211ENST00000476855 ITGAEP38570 1179 aa24.03■■□□□ 1.44
PSMD4-211ENST00000476855 MLH3Q9UHC1 1453 aa24.02■■□□□ 1.44
PSMD4-211ENST00000476855 C3P01024 1663 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms