RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
PSMD4-211ENST00000476855 ABCC9O60706 1549 aa33.79■■■■□ 3
PSMD4-211ENST00000476855 CCDC180Q9P1Z9 1646 aa33.26■■■□□ 2.91
PSMD4-211ENST00000476855 DNAJC5BQ9UF47 199 aa32.16■■■□□ 2.74
PSMD4-211ENST00000476855 RB1CC1Q8TDY2 1594 aa31.94■■■□□ 2.7
PSMD4-211ENST00000476855 NACADO15069 1562 aa31.6■■■□□ 2.65
PSMD4-211ENST00000476855 ZCCHC6Q5VYS8 1495 aaKnown RBP31.43■■■□□ 2.62
PSMD4-211ENST00000476855 PABPN1Q86U42 306 aaKnown RBP eCLIP31.41■■■□□ 2.62
PSMD4-211ENST00000476855 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
PSMD4-211ENST00000476855 UNC13AQ9UPW8 1703 aa31.13■■■□□ 2.57
PSMD4-211ENST00000476855 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
PSMD4-211ENST00000476855 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.56
PSMD4-211ENST00000476855 MYO15BQ96JP2 1530 aa31■■■□□ 2.55
PSMD4-211ENST00000476855 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
PSMD4-211ENST00000476855 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
PSMD4-211ENST00000476855 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
PSMD4-211ENST00000476855 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
PSMD4-211ENST00000476855 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
PSMD4-211ENST00000476855 DNAJC5Q9H3Z4 198 aa29.91■■■□□ 2.38
PSMD4-211ENST00000476855 CUX2O14529 1486 aa29.34■■■□□ 2.29
PSMD4-211ENST00000476855 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
PSMD4-211ENST00000476855 NCAPD3P42695 1498 aa29.2■■■□□ 2.26
PSMD4-211ENST00000476855 BAZ1AQ9NRL2 1556 aaPredicted RBP29.03■■■□□ 2.24
PSMD4-211ENST00000476855 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
PSMD4-211ENST00000476855 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
PSMD4-211ENST00000476855 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.22
PSMD4-211ENST00000476855 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
PSMD4-211ENST00000476855 HMGXB3Q12766 1538 aa28.91■■■□□ 2.22
PSMD4-211ENST00000476855 NESP48681 1621 aa28.88■■■□□ 2.21
PSMD4-211ENST00000476855 RSF1Q96T23 1441 aaPredicted RBP28.81■■■□□ 2.2
PSMD4-211ENST00000476855 PEG3Q9GZU2 1588 aa28.73■■■□□ 2.19
PSMD4-211ENST00000476855 WIZO95785 1651 aa28.73■■■□□ 2.19
PSMD4-211ENST00000476855 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
PSMD4-211ENST00000476855 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
PSMD4-211ENST00000476855 LAMC3Q9Y6N6 1575 aa28.59■■■□□ 2.17
PSMD4-211ENST00000476855 PDS5BQ9NTI5 1447 aa28.48■■■□□ 2.15
PSMD4-211ENST00000476855 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
PSMD4-211ENST00000476855 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.15
PSMD4-211ENST00000476855 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
PSMD4-211ENST00000476855 TRIM41Q8WV44 630 aa28.4■■■□□ 2.14
PSMD4-211ENST00000476855 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
PSMD4-211ENST00000476855 MRC2Q9UBG0 1479 aa28.25■■■□□ 2.11
PSMD4-211ENST00000476855 WDR62O43379 1518 aa28.18■■■□□ 2.1
PSMD4-211ENST00000476855 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
PSMD4-211ENST00000476855 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
PSMD4-211ENST00000476855 FANCD2Q9BXW9 1451 aa27.96■■■□□ 2.07
PSMD4-211ENST00000476855 OSCARQ8IYS5 282 aa27.94■■■□□ 2.06
PSMD4-211ENST00000476855 CFTRP13569 1480 aa27.86■■■□□ 2.05
PSMD4-211ENST00000476855 PRDM2Q13029 1718 aa27.77■■■□□ 2.04
PSMD4-211ENST00000476855 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
PSMD4-211ENST00000476855 RIMBP3CA6NJZ7 1639 aa27.57■■■□□ 2
PSMD4-211ENST00000476855 RIMBP3BA6NNM3 1639 aa27.57■■■□□ 2
PSMD4-211ENST00000476855 RIMBP3Q9UFD9 1639 aa27.57■■■□□ 2
PSMD4-211ENST00000476855 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
PSMD4-211ENST00000476855 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
PSMD4-211ENST00000476855 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
PSMD4-211ENST00000476855 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
PSMD4-211ENST00000476855 CYB5RLQ6IPT4 315 aa27.33■■□□□ 1.97
PSMD4-211ENST00000476855 EIF4G3O43432 1585 aaKnown RBP27.3■■□□□ 1.96
PSMD4-211ENST00000476855 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
PSMD4-211ENST00000476855 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
PSMD4-211ENST00000476855 AQRO60306 1485 aaKnown RBP eCLIP27.19■■□□□ 1.943e-7■■■■□ 21.2
PSMD4-211ENST00000476855 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
PSMD4-211ENST00000476855 CHD1O14646 1710 aa27.16■■□□□ 1.94
PSMD4-211ENST00000476855 ARAP1Q96P48 1450 aa27.15■■□□□ 1.94
PSMD4-211ENST00000476855 TARBP1Q13395 1621 aaKnown RBP27.15■■□□□ 1.94
PSMD4-211ENST00000476855 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
PSMD4-211ENST00000476855 FBLN2P98095 1184 aa27.14■■□□□ 1.94
PSMD4-211ENST00000476855 SYNJ1O43426 1573 aa27.14■■□□□ 1.93
PSMD4-211ENST00000476855 CUX1P39880 1505 aa27.12■■□□□ 1.93
PSMD4-211ENST00000476855 WRNQ14191 1432 aaPredicted RBP eCLIP27.12■■□□□ 1.93
PSMD4-211ENST00000476855 TOP2BQ02880 1626 aa27.09■■□□□ 1.93
PSMD4-211ENST00000476855 POLA1P09884 1462 aaPredicted RBP27.06■■□□□ 1.92
PSMD4-211ENST00000476855 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
PSMD4-211ENST00000476855 RAD54L2Q9Y4B4 1467 aa26.97■■□□□ 1.91
PSMD4-211ENST00000476855 TDRD9Q8NDG6 1382 aaKnown RBP26.97■■□□□ 1.91
PSMD4-211ENST00000476855 SOGA1O94964 1423 aa26.95■■□□□ 1.9
PSMD4-211ENST00000476855 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
PSMD4-211ENST00000476855 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
PSMD4-211ENST00000476855 CLASP1Q7Z460 1538 aa26.87■■□□□ 1.89
PSMD4-211ENST00000476855 CHMP7Q8WUX9 453 aaPredicted RBP26.86■■□□□ 1.89
PSMD4-211ENST00000476855 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
PSMD4-211ENST00000476855 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
PSMD4-211ENST00000476855 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
PSMD4-211ENST00000476855 GRIN2BQ13224 1484 aa26.76■■□□□ 1.87
PSMD4-211ENST00000476855 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
PSMD4-211ENST00000476855 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
PSMD4-211ENST00000476855 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
PSMD4-211ENST00000476855 ABCA5Q8WWZ7 1642 aa26.58■■□□□ 1.85
PSMD4-211ENST00000476855 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
PSMD4-211ENST00000476855 RUSC2Q8N2Y8 1516 aa26.53■■□□□ 1.84
PSMD4-211ENST00000476855 KIF27Q86VH2 1401 aa26.48■■□□□ 1.83
PSMD4-211ENST00000476855 EEA1Q15075 1411 aa26.45■■□□□ 1.82
PSMD4-211ENST00000476855 ERCC6L2Q5T890 1561 aa26.41■■□□□ 1.82
PSMD4-211ENST00000476855 GRIN2AQ12879 1464 aa26.41■■□□□ 1.82
PSMD4-211ENST00000476855 ERICH3Q5RHP9 1530 aa26.36■■□□□ 1.81
PSMD4-211ENST00000476855 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
PSMD4-211ENST00000476855 NUP160Q12769 1436 aa26.34■■□□□ 1.81
PSMD4-211ENST00000476855 CUL7Q14999 1698 aa26.31■■□□□ 1.8
PSMD4-211ENST00000476855 ADAMTS12P58397 1594 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms