RNA–Protein interactions for RNA: ENST00000475969.5

DFFB-208, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,731 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-208ENST00000475969 NBPF8Q3BBV2 869 aa22.17■■□□□ 1.14
DFFB-208ENST00000475969 ZNF326Q5BKZ1 582 aaKnown RBP22.15■■□□□ 1.14
DFFB-208ENST00000475969 POLR3GLQ9BT43 218 aa22.14■■□□□ 1.13
DFFB-208ENST00000475969 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
DFFB-208ENST00000475969 GCC2Q8IWJ2 1684 aa22.12■■□□□ 1.13
DFFB-208ENST00000475969 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
DFFB-208ENST00000475969 DAPK1P53355 1430 aa22.12■■□□□ 1.13
DFFB-208ENST00000475969 MIA2Q96PC5 1412 aa22.12■■□□□ 1.13
DFFB-208ENST00000475969 DISP1Q96F81 1524 aa22.12■■□□□ 1.13
DFFB-208ENST00000475969 ABCC5O15440 1437 aa22.11■■□□□ 1.13
DFFB-208ENST00000475969 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
DFFB-208ENST00000475969 NUP153P49790 1475 aaKnown RBP22.11■■□□□ 1.13
DFFB-208ENST00000475969 CFDP1Q9UEE9 299 aaPredicted RBP22.1■■□□□ 1.13
DFFB-208ENST00000475969 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
DFFB-208ENST00000475969 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
DFFB-208ENST00000475969 KIAA0586Q9BVV6 1533 aa22.06■■□□□ 1.12
DFFB-208ENST00000475969 PLB1Q6P1J6 1458 aa22.06■■□□□ 1.12
DFFB-208ENST00000475969 KIAA0556O60303 1618 aa22.06■■□□□ 1.12
DFFB-208ENST00000475969 ANKRD30BQ9BXX2 1392 aa22.05■■□□□ 1.12
DFFB-208ENST00000475969 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
DFFB-208ENST00000475969 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
DFFB-208ENST00000475969 AKNAQ7Z591 1439 aa22.02■■□□□ 1.12
DFFB-208ENST00000475969 MRS2Q9HD23 443 aa22■■□□□ 1.11
DFFB-208ENST00000475969 CCDC7Q96M83 1385 aa22■■□□□ 1.11
DFFB-208ENST00000475969 ERCC6Q03468 1493 aa22■■□□□ 1.11
DFFB-208ENST00000475969 PRKRIP1Q9H875 184 aaPredicted RBP21.99■■□□□ 1.11
DFFB-208ENST00000475969 RAPGEF6Q8TEU7 1601 aa21.99■■□□□ 1.11
DFFB-208ENST00000475969 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
DFFB-208ENST00000475969 CNTLNQ9NXG0 1405 aa21.98■■□□□ 1.11
DFFB-208ENST00000475969 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
DFFB-208ENST00000475969 KIF7Q2M1P5 1343 aa21.97■■□□□ 1.11
DFFB-208ENST00000475969 PKD2Q13563 968 aa21.97■■□□□ 1.11
DFFB-208ENST00000475969 JPH4Q96JJ6 628 aa21.96■■□□□ 1.11
DFFB-208ENST00000475969 ROCK1Q13464 1354 aa21.96■■□□□ 1.11
DFFB-208ENST00000475969 DNMT1P26358 1616 aaKnown RBP21.96■■□□□ 1.11
DFFB-208ENST00000475969 BCL11AQ9H165 835 aa21.94■■□□□ 1.1
DFFB-208ENST00000475969 CAMSAP2Q08AD1 1489 aa21.94■■□□□ 1.1
DFFB-208ENST00000475969 TEX14Q8IWB6 1497 aa21.94■■□□□ 1.1
DFFB-208ENST00000475969 RBM19Q9Y4C8 960 aaKnown RBP21.93■■□□□ 1.1
DFFB-208ENST00000475969 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
DFFB-208ENST00000475969 TROQ12816 1431 aaPredicted RBP21.93■■□□□ 1.1
DFFB-208ENST00000475969 KIF14Q15058 1648 aa21.93■■□□□ 1.1
DFFB-208ENST00000475969 KDM2AQ9Y2K7 1162 aa21.91■■□□□ 1.1
DFFB-208ENST00000475969 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
DFFB-208ENST00000475969 PZPP20742 1482 aa21.9■■□□□ 1.1
DFFB-208ENST00000475969 CEP170Q5SW79 1584 aa21.89■■□□□ 1.1
DFFB-208ENST00000475969 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
DFFB-208ENST00000475969 HNRNPMP52272 730 aaKnown RBP eCLIP21.86■■□□□ 1.093e-6■■■■□ 21.2
DFFB-208ENST00000475969 SPATA31E1Q6ZUB1 1445 aa21.83■■□□□ 1.08
DFFB-208ENST00000475969 NUP155O75694 1391 aa21.83■■□□□ 1.08
DFFB-208ENST00000475969 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
DFFB-208ENST00000475969 USP47Q96K76 1375 aa21.81■■□□□ 1.08
DFFB-208ENST00000475969 ANKRD50Q9ULJ7 1429 aa21.8■■□□□ 1.08
DFFB-208ENST00000475969 ANKRD30AQ9BXX3 1397 aa21.8■■□□□ 1.08
DFFB-208ENST00000475969 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
DFFB-208ENST00000475969 KIAA1107Q9UPP5 1409 aa21.79■■□□□ 1.08
DFFB-208ENST00000475969 ANP32EQ9BTT0 268 aa21.79■■□□□ 1.08
DFFB-208ENST00000475969 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
DFFB-208ENST00000475969 MAGI1Q96QZ7 1491 aaPredicted RBP21.78■■□□□ 1.08
DFFB-208ENST00000475969 TSPY4P0CV99 314 aa21.77■■□□□ 1.08
DFFB-208ENST00000475969 TSPY10P0CW01 314 aa21.77■■□□□ 1.08
DFFB-208ENST00000475969 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
DFFB-208ENST00000475969 DCAF11Q8TEB1 546 aa21.75■■□□□ 1.07
DFFB-208ENST00000475969 ATP10BO94823 1461 aa21.73■■□□□ 1.07
DFFB-208ENST00000475969 RGL3Q3MIN7 710 aa21.72■■□□□ 1.07
DFFB-208ENST00000475969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.72■■□□□ 1.07
DFFB-208ENST00000475969 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
DFFB-208ENST00000475969 ITSN2Q9NZM3 1697 aa21.72■■□□□ 1.07
DFFB-208ENST00000475969 BCORL1Q5H9F3 1711 aa21.71■■□□□ 1.07
DFFB-208ENST00000475969 ZBED9Q6R2W3 1325 aa21.71■■□□□ 1.07
DFFB-208ENST00000475969 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
DFFB-208ENST00000475969 DHX29Q7Z478 1369 aaKnown RBP21.69■■□□□ 1.06
DFFB-208ENST00000475969 ADGBQ8N7X0 1667 aa21.68■■□□□ 1.06
DFFB-208ENST00000475969 NUP160Q12769 1436 aa21.68■■□□□ 1.06
DFFB-208ENST00000475969 KIF15Q9NS87 1388 aa21.68■■□□□ 1.06
DFFB-208ENST00000475969 ADGRL2O95490 1459 aa21.67■■□□□ 1.06
DFFB-208ENST00000475969 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
DFFB-208ENST00000475969 CDC42BPAQ5VT25 1732 aa21.66■■□□□ 1.06
DFFB-208ENST00000475969 MBD5Q9P267 1494 aa21.66■■□□□ 1.06
DFFB-208ENST00000475969 PPP4R2Q9NY27 417 aa21.65■■□□□ 1.06
DFFB-208ENST00000475969 MSH5O43196 834 aa21.65■■□□□ 1.06
DFFB-208ENST00000475969 CROCC2H7BZ55 1655 aa21.63■■□□□ 1.05
DFFB-208ENST00000475969 TMC1Q8TDI8 760 aa21.63■■□□□ 1.05
DFFB-208ENST00000475969 ABCC10Q5T3U5 1492 aa21.63■■□□□ 1.05
DFFB-208ENST00000475969 ADCY10Q96PN6 1610 aa21.62■■□□□ 1.05
DFFB-208ENST00000475969 PTPRGP23470 1445 aa21.61■■□□□ 1.05
DFFB-208ENST00000475969 ABCA8O94911 1581 aa21.59■■□□□ 1.05
DFFB-208ENST00000475969 NBPF1Q3BBV0 1214 aa21.58■■□□□ 1.05
DFFB-208ENST00000475969 KDM5CP41229 1560 aa21.58■■□□□ 1.04
DFFB-208ENST00000475969 ROCK2O75116 1388 aaKnown RBP21.56■■□□□ 1.04
DFFB-208ENST00000475969 PRKCSHP14314 528 aaPredicted RBP21.56■■□□□ 1.04
DFFB-208ENST00000475969 POLR1AO95602 1720 aaPredicted RBP21.56■■□□□ 1.04
DFFB-208ENST00000475969 PNISRQ8TF01 805 aaKnown RBP21.55■■□□□ 1.04
DFFB-208ENST00000475969 RALGAPBQ86X10 1494 aa21.52■■□□□ 1.04
DFFB-208ENST00000475969 NUDCQ9Y266 331 aa21.51■■□□□ 1.03
DFFB-208ENST00000475969 UHRF1BP1Q6BDS2 1440 aa21.48■■□□□ 1.03
DFFB-208ENST00000475969 SHANK2Q9UPX8 1470 aa21.48■■□□□ 1.03
DFFB-208ENST00000475969 SAMD9LQ8IVG5 1584 aa21.48■■□□□ 1.03
DFFB-208ENST00000475969 CC2D1BQ5T0F9 858 aaKnown RBP21.47■■□□□ 1.03
DFFB-208ENST00000475969 CCDC141Q6ZP82 1450 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms