RNA–Protein interactions for RNA: ENST00000475969.5

DFFB-208, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,731 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-208ENST00000475969 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
DFFB-208ENST00000475969 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
DFFB-208ENST00000475969 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
DFFB-208ENST00000475969 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
DFFB-208ENST00000475969 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
DFFB-208ENST00000475969 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.98
DFFB-208ENST00000475969 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
DFFB-208ENST00000475969 MYO15BQ96JP2 1530 aa26.81■■□□□ 1.88
DFFB-208ENST00000475969 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
DFFB-208ENST00000475969 LOC105371045A0A1W2PR82 267 aa26.31■■□□□ 1.8
DFFB-208ENST00000475969 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
DFFB-208ENST00000475969 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
DFFB-208ENST00000475969 HRCP23327 699 aa26.06■■□□□ 1.76
DFFB-208ENST00000475969 ABCC9O60706 1549 aa25.98■■□□□ 1.75
DFFB-208ENST00000475969 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
DFFB-208ENST00000475969 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
DFFB-208ENST00000475969 PPARGC1BQ86YN6 1023 aaKnown RBP25.87■■□□□ 1.73
DFFB-208ENST00000475969 FAM9AQ8IZU1 332 aaPredicted RBP25.86■■□□□ 1.73
DFFB-208ENST00000475969 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
DFFB-208ENST00000475969 RB1CC1Q8TDY2 1594 aa25.72■■□□□ 1.71
DFFB-208ENST00000475969 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
DFFB-208ENST00000475969 TRIM26Q12899 539 aaPredicted RBP25.5■■□□□ 1.67
DFFB-208ENST00000475969 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
DFFB-208ENST00000475969 NACADO15069 1562 aa25.47■■□□□ 1.67
DFFB-208ENST00000475969 WIZO95785 1651 aa25.37■■□□□ 1.65
DFFB-208ENST00000475969 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.6
DFFB-208ENST00000475969 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
DFFB-208ENST00000475969 TTBK1Q5TCY1 1321 aaPredicted RBP24.99■■□□□ 1.59
DFFB-208ENST00000475969 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
DFFB-208ENST00000475969 CCDC88BA6NC98 1476 aa24.85■■□□□ 1.57
DFFB-208ENST00000475969 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
DFFB-208ENST00000475969 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
DFFB-208ENST00000475969 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
DFFB-208ENST00000475969 ZEB1P37275 1124 aaPredicted RBP24.79■■□□□ 1.56
DFFB-208ENST00000475969 TOP2AP11388 1531 aaKnown RBP24.78■■□□□ 1.56
DFFB-208ENST00000475969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.76■■□□□ 1.55
DFFB-208ENST00000475969 SMARCA2P51531 1590 aa24.72■■□□□ 1.55
DFFB-208ENST00000475969 SOGA1O94964 1423 aa24.72■■□□□ 1.55
DFFB-208ENST00000475969 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
DFFB-208ENST00000475969 UBTFP17480 764 aaKnown RBP24.63■■□□□ 1.53
DFFB-208ENST00000475969 CCER1Q8TC90 406 aaPredicted RBP24.6■■□□□ 1.53
DFFB-208ENST00000475969 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
DFFB-208ENST00000475969 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
DFFB-208ENST00000475969 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
DFFB-208ENST00000475969 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
DFFB-208ENST00000475969 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
DFFB-208ENST00000475969 TNIKQ9UKE5 1360 aa24.37■■□□□ 1.49
DFFB-208ENST00000475969 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
DFFB-208ENST00000475969 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
DFFB-208ENST00000475969 GOLGA3Q08378 1498 aa24.23■■□□□ 1.47
DFFB-208ENST00000475969 EEA1Q15075 1411 aa24.22■■□□□ 1.47
DFFB-208ENST00000475969 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
DFFB-208ENST00000475969 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
DFFB-208ENST00000475969 PELP1Q8IZL8 1130 aaKnown RBP24.19■■□□□ 1.46
DFFB-208ENST00000475969 SCAF1Q9H7N4 1312 aaKnown RBP24.16■■□□□ 1.46
DFFB-208ENST00000475969 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
DFFB-208ENST00000475969 DIEXFQ68CQ4 756 aaKnown RBP24.07■■□□□ 1.44
DFFB-208ENST00000475969 CLIP1P30622 1438 aa24.07■■□□□ 1.44
DFFB-208ENST00000475969 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
DFFB-208ENST00000475969 RAPGEF2Q9Y4G8 1499 aa24.05■■□□□ 1.44
DFFB-208ENST00000475969 APLP2Q06481 763 aa23.98■■□□□ 1.43
DFFB-208ENST00000475969 NEUROD1Q13562 356 aa23.92■■□□□ 1.42
DFFB-208ENST00000475969 KIF21BO75037 1637 aa23.92■■□□□ 1.42
DFFB-208ENST00000475969 VPS8Q8N3P4 1428 aa23.87■■□□□ 1.41
DFFB-208ENST00000475969 ACIN1Q9UKV3 1341 aaKnown RBP23.82■■□□□ 1.4
DFFB-208ENST00000475969 TOP2BQ02880 1626 aa23.8■■□□□ 1.4
DFFB-208ENST00000475969 ZNF316A6NFI3 1004 aaPredicted RBP23.8■■□□□ 1.4
DFFB-208ENST00000475969 YTHDC1Q96MU7 727 aaKnown RBP23.78■■□□□ 1.4
DFFB-208ENST00000475969 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
DFFB-208ENST00000475969 CUX1P39880 1505 aa23.69■■□□□ 1.38
DFFB-208ENST00000475969 GTF3C3Q9Y5Q9 886 aa23.68■■□□□ 1.38
DFFB-208ENST00000475969 NCAPD3P42695 1498 aa23.65■■□□□ 1.38
DFFB-208ENST00000475969 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.38
DFFB-208ENST00000475969 ITGAEP38570 1179 aa23.64■■□□□ 1.37
DFFB-208ENST00000475969 CENPBP07199 599 aaPredicted RBP23.63■■□□□ 1.37
DFFB-208ENST00000475969 PRXQ9BXM0 1461 aa23.63■■□□□ 1.37
DFFB-208ENST00000475969 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
DFFB-208ENST00000475969 MIER1Q8N108 512 aa23.61■■□□□ 1.37
DFFB-208ENST00000475969 KIF27Q86VH2 1401 aa23.58■■□□□ 1.36
DFFB-208ENST00000475969 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
DFFB-208ENST00000475969 CFTRP13569 1480 aa23.53■■□□□ 1.36
DFFB-208ENST00000475969 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
DFFB-208ENST00000475969 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
DFFB-208ENST00000475969 CUX2O14529 1486 aa23.45■■□□□ 1.35
DFFB-208ENST00000475969 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
DFFB-208ENST00000475969 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
DFFB-208ENST00000475969 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
DFFB-208ENST00000475969 MYT1Q01538 1121 aa23.41■■□□□ 1.34
DFFB-208ENST00000475969 IGF1RP08069 1367 aa23.38■■□□□ 1.33
DFFB-208ENST00000475969 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
DFFB-208ENST00000475969 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
DFFB-208ENST00000475969 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
DFFB-208ENST00000475969 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
DFFB-208ENST00000475969 RRBP1Q9P2E9 1410 aaKnown RBP23.26■■□□□ 1.31
DFFB-208ENST00000475969 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
DFFB-208ENST00000475969 RAD54L2Q9Y4B4 1467 aa23.19■■□□□ 1.3
DFFB-208ENST00000475969 CC2D2AQ9P2K1 1620 aa23.18■■□□□ 1.3
DFFB-208ENST00000475969 RAB3GAP2Q9H2M9 1393 aa23.16■■□□□ 1.3
DFFB-208ENST00000475969 CLSPNQ9HAW4 1339 aa23.16■■□□□ 1.3
DFFB-208ENST00000475969 NESP48681 1621 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms