RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 VPS8Q8N3P4 1428 aa25.44■■□□□ 1.66
ITGB1-210ENST00000474568 RICTORQ6R327 1708 aa25.41■■□□□ 1.66
ITGB1-210ENST00000474568 POGZQ7Z3K3 1410 aa25.41■■□□□ 1.66
ITGB1-210ENST00000474568 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
ITGB1-210ENST00000474568 PREX2Q70Z35 1606 aa25.38■■□□□ 1.65
ITGB1-210ENST00000474568 ARID4BQ4LE39 1312 aaPredicted RBP25.37■■□□□ 1.65
ITGB1-210ENST00000474568 CDC42BPBQ9Y5S2 1711 aa25.37■■□□□ 1.65
ITGB1-210ENST00000474568 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
ITGB1-210ENST00000474568 YEATS2Q9ULM3 1422 aa25.37■■□□□ 1.65
ITGB1-210ENST00000474568 AFAP1Q8N556 730 aa25.36■■□□□ 1.65
ITGB1-210ENST00000474568 GPATCH8Q9UKJ3 1502 aaKnown RBP25.36■■□□□ 1.65
ITGB1-210ENST00000474568 EHBP1L1Q8N3D4 1523 aa25.35■■□□□ 1.65
ITGB1-210ENST00000474568 MYT1LQ9UL68 1186 aa25.34■■□□□ 1.65
ITGB1-210ENST00000474568 ZMYM4Q5VZL5 1548 aa25.33■■□□□ 1.65
ITGB1-210ENST00000474568 ARHGEF40Q8TER5 1519 aa25.33■■□□□ 1.65
ITGB1-210ENST00000474568 CDC42BPAQ5VT25 1732 aa25.33■■□□□ 1.65
ITGB1-210ENST00000474568 ZFYVE16Q7Z3T8 1539 aa25.32■■□□□ 1.64
ITGB1-210ENST00000474568 CFDP1Q9UEE9 299 aaPredicted RBP25.32■■□□□ 1.64
ITGB1-210ENST00000474568 TIAM1Q13009 1591 aa25.31■■□□□ 1.64
ITGB1-210ENST00000474568 ARHGEF12Q9NZN5 1544 aa25.3■■□□□ 1.64
ITGB1-210ENST00000474568 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
ITGB1-210ENST00000474568 ZNF518AQ6AHZ1 1483 aa25.29■■□□□ 1.64
ITGB1-210ENST00000474568 ABCC1P33527 1531 aa25.29■■□□□ 1.64
ITGB1-210ENST00000474568 MAGI2Q86UL8 1455 aa25.28■■□□□ 1.64
ITGB1-210ENST00000474568 HNRNPMP52272 730 aaKnown RBP eCLIP25.26■■□□□ 1.632e-7■■■□□ 17
ITGB1-210ENST00000474568 KANK4Q5T7N3 995 aaPredicted RBP25.25■■□□□ 1.63
ITGB1-210ENST00000474568 SAMD9LQ8IVG5 1584 aa25.25■■□□□ 1.63
ITGB1-210ENST00000474568 NCOA2Q15596 1464 aa25.24■■□□□ 1.63
ITGB1-210ENST00000474568 ZNF644Q9H582 1327 aaPredicted RBP25.23■■□□□ 1.63
ITGB1-210ENST00000474568 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
ITGB1-210ENST00000474568 LRRC9Q6ZRR7 1453 aa25.22■■□□□ 1.63
ITGB1-210ENST00000474568 MLECQ14165 292 aa25.22■■□□□ 1.63
ITGB1-210ENST00000474568 ITSN2Q9NZM3 1697 aa25.22■■□□□ 1.63
ITGB1-210ENST00000474568 KDM5CP41229 1560 aa25.22■■□□□ 1.63
ITGB1-210ENST00000474568 APLP2Q06481 763 aa25.2■■□□□ 1.62
ITGB1-210ENST00000474568 ATP10AO60312 1499 aa25.2■■□□□ 1.62
ITGB1-210ENST00000474568 SUPT6HQ7KZ85 1726 aaKnown RBP25.19■■□□□ 1.62
ITGB1-210ENST00000474568 HECW2Q9P2P5 1572 aa25.18■■□□□ 1.62
ITGB1-210ENST00000474568 C9orf84Q5VXU9 1444 aa25.17■■□□□ 1.62
ITGB1-210ENST00000474568 SIGLEC1Q9BZZ2 1709 aa25.16■■□□□ 1.62
ITGB1-210ENST00000474568 PLEKHH2Q8IVE3 1493 aa25.15■■□□□ 1.62
ITGB1-210ENST00000474568 MLH3Q9UHC1 1453 aa25.15■■□□□ 1.62
ITGB1-210ENST00000474568 BCORL1Q5H9F3 1711 aa25.15■■□□□ 1.62
ITGB1-210ENST00000474568 MAP3K1Q13233 1512 aa25.15■■□□□ 1.62
ITGB1-210ENST00000474568 SPAG9O60271 1321 aaKnown RBP25.14■■□□□ 1.62
ITGB1-210ENST00000474568 KIAA1107Q9UPP5 1409 aa25.14■■□□□ 1.62
ITGB1-210ENST00000474568 ADAMTSL3P82987 1691 aa25.13■■□□□ 1.61
ITGB1-210ENST00000474568 DIP2CQ9Y2E4 1556 aa25.13■■□□□ 1.61
ITGB1-210ENST00000474568 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
ITGB1-210ENST00000474568 MADDQ8WXG6 1647 aa25.12■■□□□ 1.61
ITGB1-210ENST00000474568 ABCA6Q8N139 1617 aa25.11■■□□□ 1.61
ITGB1-210ENST00000474568 PTPRMP28827 1452 aa25.09■■□□□ 1.61
ITGB1-210ENST00000474568 CAMSAP2Q08AD1 1489 aa25.07■■□□□ 1.6
ITGB1-210ENST00000474568 KIDINS220Q9ULH0 1771 aa25.06■■□□□ 1.6
ITGB1-210ENST00000474568 MBD5Q9P267 1494 aa25.06■■□□□ 1.6
ITGB1-210ENST00000474568 RIMS1Q86UR5 1692 aaKnown RBP25.03■■□□□ 1.6
ITGB1-210ENST00000474568 ATP7AQ04656 1500 aa25.02■■□□□ 1.6
ITGB1-210ENST00000474568 MYOM3Q5VTT5 1437 aa25.01■■□□□ 1.59
ITGB1-210ENST00000474568 REREQ9P2R6 1566 aa24.99■■□□□ 1.59
ITGB1-210ENST00000474568 INO80Q9ULG1 1556 aaPredicted RBP24.98■■□□□ 1.59
ITGB1-210ENST00000474568 CCDC141Q6ZP82 1450 aa24.98■■□□□ 1.59
ITGB1-210ENST00000474568 AGLP35573 1532 aa24.94■■□□□ 1.58
ITGB1-210ENST00000474568 A2MP01023 1474 aa24.94■■□□□ 1.58
ITGB1-210ENST00000474568 FER1L4A9Z1Z3 1794 aa24.93■■□□□ 1.58
ITGB1-210ENST00000474568 CEBPAP49715 358 aaPredicted RBP24.93■■□□□ 1.58
ITGB1-210ENST00000474568 MIA2Q96PC5 1412 aa24.93■■□□□ 1.58
ITGB1-210ENST00000474568 RSPH4AQ5TD94 716 aa24.92■■□□□ 1.58
ITGB1-210ENST00000474568 TSPY4P0CV99 314 aa24.91■■□□□ 1.58
ITGB1-210ENST00000474568 TSPY10P0CW01 314 aa24.91■■□□□ 1.58
ITGB1-210ENST00000474568 RTEL1-TNFRSF6BF6WH68 1400 aa24.91■■□□□ 1.58
ITGB1-210ENST00000474568 ESF1Q9H501 851 aaKnown RBP24.9■■□□□ 1.58
ITGB1-210ENST00000474568 ARHGEF5Q12774 1597 aa24.88■■□□□ 1.57
ITGB1-210ENST00000474568 GGT6Q6P531 493 aa24.87■■□□□ 1.57
ITGB1-210ENST00000474568 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
ITGB1-210ENST00000474568 PLXNC1O60486 1568 aa24.85■■□□□ 1.57
ITGB1-210ENST00000474568 FGD6Q6ZV73 1430 aa24.85■■□□□ 1.57
ITGB1-210ENST00000474568 DHX29Q7Z478 1369 aaKnown RBP24.83■■□□□ 1.57
ITGB1-210ENST00000474568 PTPN23Q9H3S7 1636 aa24.83■■□□□ 1.56
ITGB1-210ENST00000474568 ADGBQ8N7X0 1667 aa24.81■■□□□ 1.56
ITGB1-210ENST00000474568 KIF3BO15066 747 aa24.8■■□□□ 1.56
ITGB1-210ENST00000474568 FAM50AQ14320 339 aaKnown RBP24.78■■□□□ 1.56
ITGB1-210ENST00000474568 HSPA2P54652 639 aa24.77■■□□□ 1.56
ITGB1-210ENST00000474568 ABCC5O15440 1437 aa24.77■■□□□ 1.56
ITGB1-210ENST00000474568 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
ITGB1-210ENST00000474568 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
ITGB1-210ENST00000474568 CNTLNQ9NXG0 1405 aa24.76■■□□□ 1.55
ITGB1-210ENST00000474568 MAST1Q9Y2H9 1570 aa24.75■■□□□ 1.55
ITGB1-210ENST00000474568 CHIC2Q9UKJ5 165 aa24.74■■□□□ 1.55
ITGB1-210ENST00000474568 DAPK1P53355 1430 aa24.73■■□□□ 1.55
ITGB1-210ENST00000474568 ZMYM3Q14202 1370 aa24.72■■□□□ 1.55
ITGB1-210ENST00000474568 RRP7BPQ9NSQ0 103 aa24.71■■□□□ 1.55
ITGB1-210ENST00000474568 C3P01024 1663 aa24.71■■□□□ 1.55
ITGB1-210ENST00000474568 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
ITGB1-210ENST00000474568 SHANK2Q9UPX8 1470 aa24.68■■□□□ 1.54
ITGB1-210ENST00000474568 DNMT1P26358 1616 aaKnown RBP24.68■■□□□ 1.54
ITGB1-210ENST00000474568 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
ITGB1-210ENST00000474568 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
ITGB1-210ENST00000474568 UHRF1BP1Q6BDS2 1440 aa24.65■■□□□ 1.54
ITGB1-210ENST00000474568 CROCC2H7BZ55 1655 aa24.65■■□□□ 1.54
ITGB1-210ENST00000474568 WASHC2CQ9Y4E1 1318 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms