RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 MYO5CQ9NQX4 1742 aa18.98■□□□□ 0.63
PCCB-211ENST00000473073 PTPRKQ15262 1439 aa18.98■□□□□ 0.63
PCCB-211ENST00000473073 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
PCCB-211ENST00000473073 SAMD9LQ8IVG5 1584 aa18.93■□□□□ 0.62
PCCB-211ENST00000473073 ABCA9Q8IUA7 1624 aa18.92■□□□□ 0.62
PCCB-211ENST00000473073 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
PCCB-211ENST00000473073 DNMT1P26358 1616 aaKnown RBP18.92■□□□□ 0.62
PCCB-211ENST00000473073 MAPKBP1O60336 1514 aa18.91■□□□□ 0.62
PCCB-211ENST00000473073 DAPK1P53355 1430 aa18.91■□□□□ 0.62
PCCB-211ENST00000473073 PLCH2O75038 1416 aa18.91■□□□□ 0.62
PCCB-211ENST00000473073 ABCC5O15440 1437 aa18.89■□□□□ 0.62
PCCB-211ENST00000473073 HNRNPMP52272 730 aaKnown RBP eCLIP18.87■□□□□ 0.611e-7■■■□□ 18.3
PCCB-211ENST00000473073 SYCP2Q9BX26 1530 aa18.86■□□□□ 0.61
PCCB-211ENST00000473073 CROCC2H7BZ55 1655 aa18.85■□□□□ 0.61
PCCB-211ENST00000473073 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
PCCB-211ENST00000473073 RRP7BPQ9NSQ0 103 aa18.84■□□□□ 0.61
PCCB-211ENST00000473073 SETD5Q9C0A6 1442 aa18.84■□□□□ 0.61
PCCB-211ENST00000473073 MBD5Q9P267 1494 aa18.83■□□□□ 0.6
PCCB-211ENST00000473073 EFCAB2Q5VUJ9 269 aa18.82■□□□□ 0.6
PCCB-211ENST00000473073 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
PCCB-211ENST00000473073 FANCAO15360 1455 aa18.82■□□□□ 0.6
PCCB-211ENST00000473073 ARAP3Q8WWN8 1544 aa18.82■□□□□ 0.6
PCCB-211ENST00000473073 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
PCCB-211ENST00000473073 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
PCCB-211ENST00000473073 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
PCCB-211ENST00000473073 NAIPQ13075 1403 aa18.8■□□□□ 0.6
PCCB-211ENST00000473073 ABCC1P33527 1531 aa18.8■□□□□ 0.6
PCCB-211ENST00000473073 ARHGEF5Q12774 1597 aa18.8■□□□□ 0.6
PCCB-211ENST00000473073 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
PCCB-211ENST00000473073 DIP2BQ9P265 1576 aa18.79■□□□□ 0.6
PCCB-211ENST00000473073 CCDC141Q6ZP82 1450 aa18.78■□□□□ 0.6
PCCB-211ENST00000473073 ADGBQ8N7X0 1667 aa18.78■□□□□ 0.6
PCCB-211ENST00000473073 GCC2Q8IWJ2 1684 aa18.77■□□□□ 0.6
PCCB-211ENST00000473073 FAM69CQ0P6D2 419 aa18.77■□□□□ 0.59
PCCB-211ENST00000473073 C9orf84Q5VXU9 1444 aa18.77■□□□□ 0.59
PCCB-211ENST00000473073 PLEKHH2Q8IVE3 1493 aa18.77■□□□□ 0.59
PCCB-211ENST00000473073 KDM6BO15054 1643 aa18.76■□□□□ 0.59
PCCB-211ENST00000473073 MAP3K4Q9Y6R4 1608 aa18.76■□□□□ 0.59
PCCB-211ENST00000473073 KIAA1107Q9UPP5 1409 aa18.76■□□□□ 0.59
PCCB-211ENST00000473073 SHANK2Q9UPX8 1470 aa18.75■□□□□ 0.59
PCCB-211ENST00000473073 ROCK1Q13464 1354 aa18.75■□□□□ 0.59
PCCB-211ENST00000473073 DNAJC5Q9H3Z4 198 aa18.75■□□□□ 0.59
PCCB-211ENST00000473073 TRAPPC8Q9Y2L5 1435 aa18.74■□□□□ 0.59
PCCB-211ENST00000473073 GLI2P10070 1586 aa18.74■□□□□ 0.59
PCCB-211ENST00000473073 ADGRL1O94910 1474 aa18.74■□□□□ 0.59
PCCB-211ENST00000473073 TSPY4P0CV99 314 aa18.73■□□□□ 0.59
PCCB-211ENST00000473073 TSPY10P0CW01 314 aa18.73■□□□□ 0.59
PCCB-211ENST00000473073 HRCP23327 699 aa18.73■□□□□ 0.59
PCCB-211ENST00000473073 NCOA1Q15788 1441 aa18.73■□□□□ 0.59
PCCB-211ENST00000473073 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
PCCB-211ENST00000473073 DHX57Q6P158 1386 aaKnown RBP18.71■□□□□ 0.59
PCCB-211ENST00000473073 TSPOAP1O95153 1857 aa18.71■□□□□ 0.58
PCCB-211ENST00000473073 SCAPERQ9BY12 1400 aa18.7■□□□□ 0.58
PCCB-211ENST00000473073 AFAP1Q8N556 730 aa18.7■□□□□ 0.58
PCCB-211ENST00000473073 ANKRD30AQ9BXX3 1397 aa18.7■□□□□ 0.58
PCCB-211ENST00000473073 KIF13AQ9H1H9 1805 aa18.69■□□□□ 0.58
PCCB-211ENST00000473073 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
PCCB-211ENST00000473073 RSPH4AQ5TD94 716 aa18.69■□□□□ 0.58
PCCB-211ENST00000473073 MAST1Q9Y2H9 1570 aa18.67■□□□□ 0.58
PCCB-211ENST00000473073 KIF15Q9NS87 1388 aa18.66■□□□□ 0.58
PCCB-211ENST00000473073 PPRC1Q5VV67 1664 aaKnown RBP18.65■□□□□ 0.58
PCCB-211ENST00000473073 NEO1Q92859 1461 aa18.63■□□□□ 0.57
PCCB-211ENST00000473073 ZFYVE16Q7Z3T8 1539 aa18.63■□□□□ 0.57
PCCB-211ENST00000473073 SPAG9O60271 1321 aaKnown RBP18.62■□□□□ 0.57
PCCB-211ENST00000473073 PLXNC1O60486 1568 aa18.62■□□□□ 0.57
PCCB-211ENST00000473073 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
PCCB-211ENST00000473073 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
PCCB-211ENST00000473073 POGZQ7Z3K3 1410 aa18.61■□□□□ 0.57
PCCB-211ENST00000473073 INO80Q9ULG1 1556 aaPredicted RBP18.6■□□□□ 0.57
PCCB-211ENST00000473073 ZNF518AQ6AHZ1 1483 aa18.6■□□□□ 0.57
PCCB-211ENST00000473073 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
PCCB-211ENST00000473073 ATP7AQ04656 1500 aa18.59■□□□□ 0.57
PCCB-211ENST00000473073 RAPGEF3O95398 923 aa18.59■□□□□ 0.57
PCCB-211ENST00000473073 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
PCCB-211ENST00000473073 KDM5CP41229 1560 aa18.56■□□□□ 0.56
PCCB-211ENST00000473073 RTEL1-TNFRSF6BF6WH68 1400 aa18.56■□□□□ 0.56
PCCB-211ENST00000473073 TEX14Q8IWB6 1497 aa18.55■□□□□ 0.56
PCCB-211ENST00000473073 KIDINS220Q9ULH0 1771 aa18.55■□□□□ 0.56
PCCB-211ENST00000473073 RICTORQ6R327 1708 aa18.55■□□□□ 0.56
PCCB-211ENST00000473073 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
PCCB-211ENST00000473073 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
PCCB-211ENST00000473073 FRMPD1Q5SYB0 1578 aa18.53■□□□□ 0.56
PCCB-211ENST00000473073 HECW2Q9P2P5 1572 aa18.53■□□□□ 0.56
PCCB-211ENST00000473073 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.56
PCCB-211ENST00000473073 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
PCCB-211ENST00000473073 PZPP20742 1482 aa18.49■□□□□ 0.55
PCCB-211ENST00000473073 ERBINQ96RT1 1412 aa18.49■□□□□ 0.55
PCCB-211ENST00000473073 FOXD1Q16676 465 aa18.49■□□□□ 0.55
PCCB-211ENST00000473073 ABCA6Q8N139 1617 aa18.48■□□□□ 0.55
PCCB-211ENST00000473073 MLH3Q9UHC1 1453 aa18.48■□□□□ 0.55
PCCB-211ENST00000473073 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
PCCB-211ENST00000473073 NUP155O75694 1391 aa18.47■□□□□ 0.55
PCCB-211ENST00000473073 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
PCCB-211ENST00000473073 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
PCCB-211ENST00000473073 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
PCCB-211ENST00000473073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
PCCB-211ENST00000473073 UNC13BO14795 1591 aa18.45■□□□□ 0.54
PCCB-211ENST00000473073 YEATS2Q9ULM3 1422 aa18.45■□□□□ 0.54
PCCB-211ENST00000473073 DIP2CQ9Y2E4 1556 aa18.43■□□□□ 0.54
PCCB-211ENST00000473073 DHX29Q7Z478 1369 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms