RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 CCNB3Q8WWL7 1395 aa24.85■■□□□ 1.57
PCOLCE-205ENST00000472348 TEX14Q8IWB6 1497 aa24.84■■□□□ 1.57
PCOLCE-205ENST00000472348 MYOM3Q5VTT5 1437 aa24.84■■□□□ 1.57
PCOLCE-205ENST00000472348 PPRC1Q5VV67 1664 aaKnown RBP24.82■■□□□ 1.56
PCOLCE-205ENST00000472348 NEO1Q92859 1461 aa24.81■■□□□ 1.56
PCOLCE-205ENST00000472348 EFCAB2Q5VUJ9 269 aa24.76■■□□□ 1.55
PCOLCE-205ENST00000472348 FANCAO15360 1455 aa24.76■■□□□ 1.55
PCOLCE-205ENST00000472348 ARHGAP5Q13017 1502 aa24.76■■□□□ 1.55
PCOLCE-205ENST00000472348 PLEKHH2Q8IVE3 1493 aa24.75■■□□□ 1.55
PCOLCE-205ENST00000472348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.74■■□□□ 1.55
PCOLCE-205ENST00000472348 FGD6Q6ZV73 1430 aa24.73■■□□□ 1.55
PCOLCE-205ENST00000472348 TCOF1Q13428 1488 aaKnown RBP24.72■■□□□ 1.55
PCOLCE-205ENST00000472348 CFDP1Q9UEE9 299 aaPredicted RBP24.72■■□□□ 1.55
PCOLCE-205ENST00000472348 KIAA1107Q9UPP5 1409 aa24.71■■□□□ 1.55
PCOLCE-205ENST00000472348 RRBP1Q9P2E9 1410 aaKnown RBP24.7■■□□□ 1.55
PCOLCE-205ENST00000472348 PTPN23Q9H3S7 1636 aa24.69■■□□□ 1.54
PCOLCE-205ENST00000472348 SAMD9LQ8IVG5 1584 aa24.68■■□□□ 1.54
PCOLCE-205ENST00000472348 KDM6BO15054 1643 aa24.67■■□□□ 1.54
PCOLCE-205ENST00000472348 AKNAQ7Z591 1439 aa24.67■■□□□ 1.54
PCOLCE-205ENST00000472348 ABCC1P33527 1531 aa24.66■■□□□ 1.54
PCOLCE-205ENST00000472348 RSPH4AQ5TD94 716 aa24.66■■□□□ 1.54
PCOLCE-205ENST00000472348 ARHGEF5Q12774 1597 aa24.64■■□□□ 1.54
PCOLCE-205ENST00000472348 CAMSAP2Q08AD1 1489 aa24.64■■□□□ 1.53
PCOLCE-205ENST00000472348 ADGRL1O94910 1474 aa24.62■■□□□ 1.53
PCOLCE-205ENST00000472348 PPARGC1BQ86YN6 1023 aaKnown RBP24.61■■□□□ 1.53
PCOLCE-205ENST00000472348 MBD5Q9P267 1494 aa24.59■■□□□ 1.53
PCOLCE-205ENST00000472348 DNMT1P26358 1616 aaKnown RBP24.57■■□□□ 1.52
PCOLCE-205ENST00000472348 RICTORQ6R327 1708 aa24.56■■□□□ 1.52
PCOLCE-205ENST00000472348 DENND4BO75064 1496 aaPredicted RBP24.56■■□□□ 1.52
PCOLCE-205ENST00000472348 ZNF518AQ6AHZ1 1483 aa24.56■■□□□ 1.52
PCOLCE-205ENST00000472348 SYCP2Q9BX26 1530 aa24.56■■□□□ 1.52
PCOLCE-205ENST00000472348 SCAPERQ9BY12 1400 aa24.55■■□□□ 1.52
PCOLCE-205ENST00000472348 KDM5CP41229 1560 aa24.54■■□□□ 1.52
PCOLCE-205ENST00000472348 ARHGEF12Q9NZN5 1544 aa24.54■■□□□ 1.52
PCOLCE-205ENST00000472348 COL17A1Q9UMD9 1497 aaPredicted RBP24.53■■□□□ 1.52
PCOLCE-205ENST00000472348 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
PCOLCE-205ENST00000472348 CCDC141Q6ZP82 1450 aa24.52■■□□□ 1.52
PCOLCE-205ENST00000472348 ZNF777Q9ULD5 760 aaPredicted RBP24.52■■□□□ 1.52
PCOLCE-205ENST00000472348 CROCC2H7BZ55 1655 aa24.52■■□□□ 1.52
PCOLCE-205ENST00000472348 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
PCOLCE-205ENST00000472348 ZMYM4Q5VZL5 1548 aa24.51■■□□□ 1.51
PCOLCE-205ENST00000472348 MAST1Q9Y2H9 1570 aa24.51■■□□□ 1.51
PCOLCE-205ENST00000472348 ZNF644Q9H582 1327 aaPredicted RBP24.51■■□□□ 1.51
PCOLCE-205ENST00000472348 MAGI2Q86UL8 1455 aa24.49■■□□□ 1.51
PCOLCE-205ENST00000472348 RTEL1-TNFRSF6BF6WH68 1400 aa24.48■■□□□ 1.51
PCOLCE-205ENST00000472348 FRMPD1Q5SYB0 1578 aa24.47■■□□□ 1.51
PCOLCE-205ENST00000472348 MLH3Q9UHC1 1453 aa24.47■■□□□ 1.51
PCOLCE-205ENST00000472348 DAPK1P53355 1430 aa24.47■■□□□ 1.51
PCOLCE-205ENST00000472348 TRAPPC8Q9Y2L5 1435 aa24.45■■□□□ 1.51
PCOLCE-205ENST00000472348 ABCC5O15440 1437 aa24.44■■□□□ 1.5
PCOLCE-205ENST00000472348 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
PCOLCE-205ENST00000472348 INO80Q9ULG1 1556 aaPredicted RBP24.43■■□□□ 1.5
PCOLCE-205ENST00000472348 HNRNPMP52272 730 aaKnown RBP eCLIP24.43■■□□□ 1.5
PCOLCE-205ENST00000472348 FAM50AQ14320 339 aaKnown RBP24.42■■□□□ 1.5
PCOLCE-205ENST00000472348 ADGBQ8N7X0 1667 aa24.41■■□□□ 1.5
PCOLCE-205ENST00000472348 ADGRL2O95490 1459 aa24.41■■□□□ 1.5
PCOLCE-205ENST00000472348 TSPY4P0CV99 314 aa24.41■■□□□ 1.5
PCOLCE-205ENST00000472348 TSPY10P0CW01 314 aa24.41■■□□□ 1.5
PCOLCE-205ENST00000472348 PLXNC1O60486 1568 aa24.4■■□□□ 1.5
PCOLCE-205ENST00000472348 ZFYVE16Q7Z3T8 1539 aa24.39■■□□□ 1.49
PCOLCE-205ENST00000472348 ROCK1Q13464 1354 aa24.39■■□□□ 1.49
PCOLCE-205ENST00000472348 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.49
PCOLCE-205ENST00000472348 ATP7AQ04656 1500 aa24.38■■□□□ 1.49
PCOLCE-205ENST00000472348 C9orf84Q5VXU9 1444 aa24.37■■□□□ 1.49
PCOLCE-205ENST00000472348 TRIM26Q12899 539 aaPredicted RBP24.37■■□□□ 1.49
PCOLCE-205ENST00000472348 AFAP1Q8N556 730 aa24.37■■□□□ 1.49
PCOLCE-205ENST00000472348 SPAG9O60271 1321 aaKnown RBP24.35■■□□□ 1.49
PCOLCE-205ENST00000472348 RAPGEF3O95398 923 aa24.35■■□□□ 1.49
PCOLCE-205ENST00000472348 REREQ9P2R6 1566 aa24.34■■□□□ 1.49
PCOLCE-205ENST00000472348 ANKRD30AQ9BXX3 1397 aa24.31■■□□□ 1.48
PCOLCE-205ENST00000472348 PTPRKQ15262 1439 aa24.31■■□□□ 1.48
PCOLCE-205ENST00000472348 NCOA1Q15788 1441 aa24.31■■□□□ 1.48
PCOLCE-205ENST00000472348 ARHGEF40Q8TER5 1519 aa24.3■■□□□ 1.48
PCOLCE-205ENST00000472348 DIP2CQ9Y2E4 1556 aa24.28■■□□□ 1.48
PCOLCE-205ENST00000472348 ABCA6Q8N139 1617 aa24.27■■□□□ 1.48
PCOLCE-205ENST00000472348 DUOX2Q9NRD8 1548 aa24.25■■□□□ 1.47
PCOLCE-205ENST00000472348 GCC2Q8IWJ2 1684 aa24.25■■□□□ 1.47
PCOLCE-205ENST00000472348 BCORL1Q5H9F3 1711 aa24.25■■□□□ 1.47
PCOLCE-205ENST00000472348 ATP10AO60312 1499 aa24.25■■□□□ 1.47
PCOLCE-205ENST00000472348 ACIN1Q9UKV3 1341 aaKnown RBP24.24■■□□□ 1.47
PCOLCE-205ENST00000472348 HFM1A2PYH4 1435 aa24.24■■□□□ 1.47
PCOLCE-205ENST00000472348 EIF2AK4Q9P2K8 1649 aaKnown RBP24.23■■□□□ 1.47
PCOLCE-205ENST00000472348 AGLP35573 1532 aa24.21■■□□□ 1.47
PCOLCE-205ENST00000472348 ERBINQ96RT1 1412 aa24.21■■□□□ 1.47
PCOLCE-205ENST00000472348 YEATS2Q9ULM3 1422 aa24.2■■□□□ 1.46
PCOLCE-205ENST00000472348 DHX29Q7Z478 1369 aaKnown RBP24.2■■□□□ 1.46
PCOLCE-205ENST00000472348 KIF15Q9NS87 1388 aa24.2■■□□□ 1.46
PCOLCE-205ENST00000472348 A2MP01023 1474 aa24.19■■□□□ 1.46
PCOLCE-205ENST00000472348 KDM4FA0A1W2PPD8 638 aa24.18■■□□□ 1.46
PCOLCE-205ENST00000472348 NAIPQ13075 1403 aa24.17■■□□□ 1.46
PCOLCE-205ENST00000472348 ITGAEP38570 1179 aa24.15■■□□□ 1.46
PCOLCE-205ENST00000472348 CHIC2Q9UKJ5 165 aa24.15■■□□□ 1.46
PCOLCE-205ENST00000472348 HRCP23327 699 aa24.14■■□□□ 1.45
PCOLCE-205ENST00000472348 MYT1LQ9UL68 1186 aa24.14■■□□□ 1.45
PCOLCE-205ENST00000472348 ANKRD50Q9ULJ7 1429 aa24.13■■□□□ 1.45
PCOLCE-205ENST00000472348 FAM135AQ9P2D6 1515 aa24.11■■□□□ 1.45
PCOLCE-205ENST00000472348 DEPDC5O75140 1603 aa24.1■■□□□ 1.45
PCOLCE-205ENST00000472348 RNF17Q9BXT8 1623 aaKnown RBP24.1■■□□□ 1.45
PCOLCE-205ENST00000472348 RRP7BPQ9NSQ0 103 aa24.1■■□□□ 1.45
PCOLCE-205ENST00000472348 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms