RNA–Protein interactions for RNA: ENST00000471166.1

TNPO3-202, Transcript of transportin 3, humanhuman

TSL 5 BASIC

Gene TNPO3, Length 3,019 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-202ENST00000471166 CCNB3Q8WWL7 1395 aa12.14□□□□□ -0.47
TNPO3-202ENST00000471166 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
TNPO3-202ENST00000471166 MYOM3Q5VTT5 1437 aa12.13□□□□□ -0.47
TNPO3-202ENST00000471166 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
TNPO3-202ENST00000471166 BCANQ96GW7 911 aa12.13□□□□□ -0.47
TNPO3-202ENST00000471166 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
TNPO3-202ENST00000471166 WDR7Q9Y4E6 1490 aa12.11□□□□□ -0.47
TNPO3-202ENST00000471166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.11□□□□□ -0.475e-10■■■□□ 14.8
TNPO3-202ENST00000471166 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
TNPO3-202ENST00000471166 CFDP1Q9UEE9 299 aaPredicted RBP12.11□□□□□ -0.47
TNPO3-202ENST00000471166 ABCC10Q5T3U5 1492 aa12.1□□□□□ -0.47
TNPO3-202ENST00000471166 GPATCH8Q9UKJ3 1502 aaKnown RBP12.1□□□□□ -0.47
TNPO3-202ENST00000471166 CDC42BPAQ5VT25 1732 aa12.09□□□□□ -0.47
TNPO3-202ENST00000471166 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
TNPO3-202ENST00000471166 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
TNPO3-202ENST00000471166 CDC42BPBQ9Y5S2 1711 aa12.05□□□□□ -0.48
TNPO3-202ENST00000471166 HNRNPMP52272 730 aaKnown RBP eCLIP12.05□□□□□ -0.481e-6■■■■□ 20.8
TNPO3-202ENST00000471166 FAM69CQ0P6D2 419 aa12.05□□□□□ -0.48
TNPO3-202ENST00000471166 ARHGAP5Q13017 1502 aa12.04□□□□□ -0.48
TNPO3-202ENST00000471166 PTPRKQ15262 1439 aa12.04□□□□□ -0.48
TNPO3-202ENST00000471166 CAMSAP2Q08AD1 1489 aa12.03□□□□□ -0.48
TNPO3-202ENST00000471166 MYO5CQ9NQX4 1742 aa12.03□□□□□ -0.48
TNPO3-202ENST00000471166 ITSN2Q9NZM3 1697 aa12.02□□□□□ -0.48
TNPO3-202ENST00000471166 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
TNPO3-202ENST00000471166 PREX2Q70Z35 1606 aa12.02□□□□□ -0.49
TNPO3-202ENST00000471166 MAPKBP1O60336 1514 aa12.01□□□□□ -0.49
TNPO3-202ENST00000471166 RRP7BPQ9NSQ0 103 aa12.01□□□□□ -0.49
TNPO3-202ENST00000471166 TSPOAP1O95153 1857 aa12.01□□□□□ -0.49
TNPO3-202ENST00000471166 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
TNPO3-202ENST00000471166 ERICH6Q7L0X2 663 aa12□□□□□ -0.49
TNPO3-202ENST00000471166 SAMD9LQ8IVG5 1584 aa12□□□□□ -0.49
TNPO3-202ENST00000471166 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
TNPO3-202ENST00000471166 PLCH2O75038 1416 aa12□□□□□ -0.49
TNPO3-202ENST00000471166 CD109Q6YHK3 1445 aa12□□□□□ -0.49
TNPO3-202ENST00000471166 TCOF1Q13428 1488 aaKnown RBP11.99□□□□□ -0.49
TNPO3-202ENST00000471166 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
TNPO3-202ENST00000471166 EFCAB2Q5VUJ9 269 aa11.98□□□□□ -0.49
TNPO3-202ENST00000471166 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
TNPO3-202ENST00000471166 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
TNPO3-202ENST00000471166 ARHGEF12Q9NZN5 1544 aa11.97□□□□□ -0.49
TNPO3-202ENST00000471166 ABCC5O15440 1437 aa11.97□□□□□ -0.49
TNPO3-202ENST00000471166 FANCAO15360 1455 aa11.97□□□□□ -0.49
TNPO3-202ENST00000471166 DAPK1P53355 1430 aa11.96□□□□□ -0.49
TNPO3-202ENST00000471166 AFAP1Q8N556 730 aa11.96□□□□□ -0.5
TNPO3-202ENST00000471166 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
TNPO3-202ENST00000471166 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
TNPO3-202ENST00000471166 TRAPPC8Q9Y2L5 1435 aa11.94□□□□□ -0.5
TNPO3-202ENST00000471166 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
TNPO3-202ENST00000471166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.93□□□□□ -0.5
TNPO3-202ENST00000471166 MBD5Q9P267 1494 aa11.93□□□□□ -0.5
TNPO3-202ENST00000471166 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
TNPO3-202ENST00000471166 MSH5O43196 834 aa11.92□□□□□ -0.5
TNPO3-202ENST00000471166 RAPGEF3O95398 923 aa11.92□□□□□ -0.5
TNPO3-202ENST00000471166 SCAPERQ9BY12 1400 aa11.92□□□□□ -0.5
TNPO3-202ENST00000471166 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
TNPO3-202ENST00000471166 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
TNPO3-202ENST00000471166 AKNAQ7Z591 1439 aa11.91□□□□□ -0.5
TNPO3-202ENST00000471166 RAB3GAP2Q9H2M9 1393 aa11.91□□□□□ -0.5
TNPO3-202ENST00000471166 ABCC1P33527 1531 aa11.91□□□□□ -0.5
TNPO3-202ENST00000471166 TSPY4P0CV99 314 aa11.9□□□□□ -0.5
TNPO3-202ENST00000471166 TSPY10P0CW01 314 aa11.9□□□□□ -0.5
TNPO3-202ENST00000471166 KDM6BO15054 1643 aa11.9□□□□□ -0.5
TNPO3-202ENST00000471166 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
TNPO3-202ENST00000471166 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
TNPO3-202ENST00000471166 PPRC1Q5VV67 1664 aaKnown RBP11.89□□□□□ -0.51
TNPO3-202ENST00000471166 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
TNPO3-202ENST00000471166 GLI2P10070 1586 aa11.88□□□□□ -0.51
TNPO3-202ENST00000471166 CROCC2H7BZ55 1655 aa11.88□□□□□ -0.51
TNPO3-202ENST00000471166 NAIPQ13075 1403 aa11.88□□□□□ -0.51
TNPO3-202ENST00000471166 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
TNPO3-202ENST00000471166 FKBP8Q14318 412 aa11.88□□□□□ -0.51
TNPO3-202ENST00000471166 ARAP3Q8WWN8 1544 aa11.87□□□□□ -0.51
TNPO3-202ENST00000471166 KIAA1107Q9UPP5 1409 aa11.86□□□□□ -0.51
TNPO3-202ENST00000471166 ARHGEF5Q12774 1597 aa11.86□□□□□ -0.51
TNPO3-202ENST00000471166 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
TNPO3-202ENST00000471166 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
TNPO3-202ENST00000471166 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
TNPO3-202ENST00000471166 PLEKHH2Q8IVE3 1493 aa11.85□□□□□ -0.51
TNPO3-202ENST00000471166 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
TNPO3-202ENST00000471166 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
TNPO3-202ENST00000471166 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
TNPO3-202ENST00000471166 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
TNPO3-202ENST00000471166 ANKRD30AQ9BXX3 1397 aa11.84□□□□□ -0.51
TNPO3-202ENST00000471166 COL17A1Q9UMD9 1497 aaPredicted RBP11.83□□□□□ -0.52
TNPO3-202ENST00000471166 ADGBQ8N7X0 1667 aa11.83□□□□□ -0.52
TNPO3-202ENST00000471166 NEO1Q92859 1461 aa11.82□□□□□ -0.52
TNPO3-202ENST00000471166 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
TNPO3-202ENST00000471166 POGZQ7Z3K3 1410 aa11.82□□□□□ -0.52
TNPO3-202ENST00000471166 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
TNPO3-202ENST00000471166 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
TNPO3-202ENST00000471166 CFAP74Q9C0B2 1584 aa11.81□□□□□ -0.52
TNPO3-202ENST00000471166 SHANK2Q9UPX8 1470 aa11.81□□□□□ -0.52
TNPO3-202ENST00000471166 ROCK1Q13464 1354 aa11.81□□□□□ -0.52
TNPO3-202ENST00000471166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■■■■■ 28.5
TNPO3-202ENST00000471166 ADGRL2O95490 1459 aa11.8□□□□□ -0.52
TNPO3-202ENST00000471166 DEKP35659 375 aaKnown RBP11.8□□□□□ -0.52
TNPO3-202ENST00000471166 FOXD1Q16676 465 aa11.8□□□□□ -0.52
TNPO3-202ENST00000471166 ZFYVE16Q7Z3T8 1539 aa11.8□□□□□ -0.52
TNPO3-202ENST00000471166 ZNF518AQ6AHZ1 1483 aa11.8□□□□□ -0.52
TNPO3-202ENST00000471166 ANKRD50Q9ULJ7 1429 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms