RNA–Protein interactions for RNA: ENST00000471166.1

TNPO3-202, Transcript of transportin 3, humanhuman

TSL 5 BASIC

Gene TNPO3, Length 3,019 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-202ENST00000471166 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
TNPO3-202ENST00000471166 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
TNPO3-202ENST00000471166 ABCC9O60706 1549 aa15.59■□□□□ 0.09
TNPO3-202ENST00000471166 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
TNPO3-202ENST00000471166 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
TNPO3-202ENST00000471166 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
TNPO3-202ENST00000471166 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0
TNPO3-202ENST00000471166 NACADO15069 1562 aa15.01□□□□□ -0.01
TNPO3-202ENST00000471166 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
TNPO3-202ENST00000471166 MYO15BQ96JP2 1530 aa14.94□□□□□ -0.02
TNPO3-202ENST00000471166 SCRIBQ14160 1630 aa14.93□□□□□ -0.02
TNPO3-202ENST00000471166 UNC13AQ9UPW8 1703 aa14.74□□□□□ -0.05
TNPO3-202ENST00000471166 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
TNPO3-202ENST00000471166 BICRAQ9NZM4 1560 aa14.58□□□□□ -0.08
TNPO3-202ENST00000471166 CECR2Q9BXF3 1484 aa14.43□□□□□ -0.1
TNPO3-202ENST00000471166 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
TNPO3-202ENST00000471166 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
TNPO3-202ENST00000471166 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
TNPO3-202ENST00000471166 SMARCA4P51532 1647 aa14.2□□□□□ -0.14
TNPO3-202ENST00000471166 BAZ1AQ9NRL2 1556 aaPredicted RBP14.19□□□□□ -0.14
TNPO3-202ENST00000471166 WIZO95785 1651 aa14.17□□□□□ -0.14
TNPO3-202ENST00000471166 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
TNPO3-202ENST00000471166 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
TNPO3-202ENST00000471166 ATAD2BQ9ULI0 1458 aa14.02□□□□□ -0.16
TNPO3-202ENST00000471166 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
TNPO3-202ENST00000471166 HRCP23327 699 aa13.96□□□□□ -0.18
TNPO3-202ENST00000471166 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
TNPO3-202ENST00000471166 SMARCA2P51531 1590 aa13.95□□□□□ -0.18
TNPO3-202ENST00000471166 PEG3Q9GZU2 1588 aa13.94□□□□□ -0.18
TNPO3-202ENST00000471166 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
TNPO3-202ENST00000471166 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
TNPO3-202ENST00000471166 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
TNPO3-202ENST00000471166 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
TNPO3-202ENST00000471166 PELP1Q8IZL8 1130 aaKnown RBP13.84□□□□□ -0.19
TNPO3-202ENST00000471166 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
TNPO3-202ENST00000471166 PCGF6Q9BYE7 350 aa13.67□□□□□ -0.22
TNPO3-202ENST00000471166 NESP48681 1621 aa13.64□□□□□ -0.23
TNPO3-202ENST00000471166 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
TNPO3-202ENST00000471166 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
TNPO3-202ENST00000471166 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
TNPO3-202ENST00000471166 CFTRP13569 1480 aa13.54□□□□□ -0.24
TNPO3-202ENST00000471166 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
TNPO3-202ENST00000471166 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
TNPO3-202ENST00000471166 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
TNPO3-202ENST00000471166 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
TNPO3-202ENST00000471166 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
TNPO3-202ENST00000471166 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.266e-7■■■■■ 33.4
TNPO3-202ENST00000471166 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
TNPO3-202ENST00000471166 SYNJ1O43426 1573 aa13.39□□□□□ -0.27
TNPO3-202ENST00000471166 FAM9AQ8IZU1 332 aaPredicted RBP13.38□□□□□ -0.27
TNPO3-202ENST00000471166 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
TNPO3-202ENST00000471166 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
TNPO3-202ENST00000471166 CUX1P39880 1505 aa13.35□□□□□ -0.27
TNPO3-202ENST00000471166 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
TNPO3-202ENST00000471166 MYT1Q01538 1121 aa13.32□□□□□ -0.28
TNPO3-202ENST00000471166 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
TNPO3-202ENST00000471166 URB2Q14146 1524 aaKnown RBP13.3□□□□□ -0.28
TNPO3-202ENST00000471166 TOP2BQ02880 1626 aa13.27□□□□□ -0.28
TNPO3-202ENST00000471166 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
TNPO3-202ENST00000471166 SOGA1O94964 1423 aa13.25□□□□□ -0.29
TNPO3-202ENST00000471166 RUSC2Q8N2Y8 1516 aa13.25□□□□□ -0.29
TNPO3-202ENST00000471166 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
TNPO3-202ENST00000471166 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
TNPO3-202ENST00000471166 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
TNPO3-202ENST00000471166 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
TNPO3-202ENST00000471166 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
TNPO3-202ENST00000471166 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
TNPO3-202ENST00000471166 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
TNPO3-202ENST00000471166 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
TNPO3-202ENST00000471166 WDR62O43379 1518 aa13.14□□□□□ -0.31
TNPO3-202ENST00000471166 CUX2O14529 1486 aa13.13□□□□□ -0.31
TNPO3-202ENST00000471166 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
TNPO3-202ENST00000471166 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
TNPO3-202ENST00000471166 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
TNPO3-202ENST00000471166 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.325e-7■■■■□ 24.6
TNPO3-202ENST00000471166 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
TNPO3-202ENST00000471166 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
TNPO3-202ENST00000471166 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
TNPO3-202ENST00000471166 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
TNPO3-202ENST00000471166 WDR97A6NE52 1622 aa13.03□□□□□ -0.32
TNPO3-202ENST00000471166 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
TNPO3-202ENST00000471166 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
TNPO3-202ENST00000471166 IGF1RP08069 1367 aa13□□□□□ -0.33
TNPO3-202ENST00000471166 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
TNPO3-202ENST00000471166 RANGAP1P46060 587 aaPredicted RBP12.99□□□□□ -0.33
TNPO3-202ENST00000471166 EEA1Q15075 1411 aa12.98□□□□□ -0.33
TNPO3-202ENST00000471166 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
TNPO3-202ENST00000471166 ABCA5Q8WWZ7 1642 aa12.97□□□□□ -0.33
TNPO3-202ENST00000471166 UBTFP17480 764 aaKnown RBP12.97□□□□□ -0.33
TNPO3-202ENST00000471166 RAPGEF2Q9Y4G8 1499 aa12.97□□□□□ -0.33
TNPO3-202ENST00000471166 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
TNPO3-202ENST00000471166 CARMIL1Q5VZK9 1371 aa12.93□□□□□ -0.34
TNPO3-202ENST00000471166 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
TNPO3-202ENST00000471166 FBLN2P98095 1184 aa12.91□□□□□ -0.34
TNPO3-202ENST00000471166 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
TNPO3-202ENST00000471166 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
TNPO3-202ENST00000471166 SNAPC4Q5SXM2 1469 aa12.89□□□□□ -0.35
TNPO3-202ENST00000471166 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
TNPO3-202ENST00000471166 GRIN2BQ13224 1484 aa12.89□□□□□ -0.35
TNPO3-202ENST00000471166 KIF21BO75037 1637 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms