RNA–Protein interactions for RNA: ENST00000470322.5

ACTR1A-202, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

TSL 2

Gene ACTR1A, Length 3,519 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-202ENST00000470322 NBR1Q14596 966 aa12.7□□□□□ -0.38
ACTR1A-202ENST00000470322 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
ACTR1A-202ENST00000470322 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
ACTR1A-202ENST00000470322 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
ACTR1A-202ENST00000470322 HFM1A2PYH4 1435 aa12.66□□□□□ -0.38
ACTR1A-202ENST00000470322 KIF7Q2M1P5 1343 aa12.66□□□□□ -0.38
ACTR1A-202ENST00000470322 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
ACTR1A-202ENST00000470322 ZNF608Q9ULD9 1512 aaPredicted RBP12.63□□□□□ -0.39
ACTR1A-202ENST00000470322 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
ACTR1A-202ENST00000470322 PPP4R2Q9NY27 417 aa12.61□□□□□ -0.39
ACTR1A-202ENST00000470322 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
ACTR1A-202ENST00000470322 CCDC7Q96M83 1385 aa12.59□□□□□ -0.39
ACTR1A-202ENST00000470322 EFCAB5A4FU69 1503 aa12.59□□□□□ -0.39
ACTR1A-202ENST00000470322 USP47Q96K76 1375 aa12.58□□□□□ -0.4
ACTR1A-202ENST00000470322 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
ACTR1A-202ENST00000470322 EPRSP07814 1512 aaKnown RBP12.58□□□□□ -0.4
ACTR1A-202ENST00000470322 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
ACTR1A-202ENST00000470322 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
ACTR1A-202ENST00000470322 PLB1Q6P1J6 1458 aa12.55□□□□□ -0.4
ACTR1A-202ENST00000470322 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
ACTR1A-202ENST00000470322 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
ACTR1A-202ENST00000470322 CARMIL2Q6F5E8 1435 aa12.55□□□□□ -0.4
ACTR1A-202ENST00000470322 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
ACTR1A-202ENST00000470322 MAP3K1Q13233 1512 aa12.55□□□□□ -0.4
ACTR1A-202ENST00000470322 SNAPC4Q5SXM2 1469 aa12.54□□□□□ -0.4
ACTR1A-202ENST00000470322 PLIN1O60240 522 aa12.54□□□□□ -0.4
ACTR1A-202ENST00000470322 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
ACTR1A-202ENST00000470322 DAXXQ9UER7 740 aaPredicted RBP12.53□□□□□ -0.4
ACTR1A-202ENST00000470322 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.41
ACTR1A-202ENST00000470322 PTPN23Q9H3S7 1636 aa12.52□□□□□ -0.41
ACTR1A-202ENST00000470322 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.41
ACTR1A-202ENST00000470322 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
ACTR1A-202ENST00000470322 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
ACTR1A-202ENST00000470322 DAPK1P53355 1430 aa12.51□□□□□ -0.41
ACTR1A-202ENST00000470322 EHBP1L1Q8N3D4 1523 aa12.51□□□□□ -0.41
ACTR1A-202ENST00000470322 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
ACTR1A-202ENST00000470322 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
ACTR1A-202ENST00000470322 ABCC5O15440 1437 aa12.5□□□□□ -0.41
ACTR1A-202ENST00000470322 ANKRD50Q9ULJ7 1429 aa12.5□□□□□ -0.41
ACTR1A-202ENST00000470322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.5□□□□□ -0.41
ACTR1A-202ENST00000470322 SAFB2Q14151 953 aaKnown RBP eCLIP12.5□□□□□ -0.41
ACTR1A-202ENST00000470322 SUPT6HQ7KZ85 1726 aaKnown RBP12.49□□□□□ -0.41
ACTR1A-202ENST00000470322 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
ACTR1A-202ENST00000470322 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
ACTR1A-202ENST00000470322 PTPRGP23470 1445 aa12.49□□□□□ -0.41
ACTR1A-202ENST00000470322 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
ACTR1A-202ENST00000470322 PANK3Q9H999 370 aa12.48□□□□□ -0.41
ACTR1A-202ENST00000470322 KIF15Q9NS87 1388 aa12.48□□□□□ -0.41
ACTR1A-202ENST00000470322 AKNAQ7Z591 1439 aa12.48□□□□□ -0.41
ACTR1A-202ENST00000470322 IQGAP2Q13576 1575 aa12.47□□□□□ -0.41
ACTR1A-202ENST00000470322 CUL7Q14999 1698 aa12.47□□□□□ -0.41
ACTR1A-202ENST00000470322 MRC2Q9UBG0 1479 aa12.47□□□□□ -0.41
ACTR1A-202ENST00000470322 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
ACTR1A-202ENST00000470322 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
ACTR1A-202ENST00000470322 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
ACTR1A-202ENST00000470322 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
ACTR1A-202ENST00000470322 CDCA7LQ96GN5 454 aa12.47□□□□□ -0.41
ACTR1A-202ENST00000470322 ZBED9Q6R2W3 1325 aa12.46□□□□□ -0.41
ACTR1A-202ENST00000470322 AFAP1Q8N556 730 aa12.46□□□□□ -0.41
ACTR1A-202ENST00000470322 GGT6Q6P531 493 aa12.45□□□□□ -0.42
ACTR1A-202ENST00000470322 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
ACTR1A-202ENST00000470322 KIF3BO15066 747 aa12.45□□□□□ -0.42
ACTR1A-202ENST00000470322 EXOC6Q8TAG9 804 aa12.45□□□□□ -0.42
ACTR1A-202ENST00000470322 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
ACTR1A-202ENST00000470322 SKAP1Q86WV1 359 aa12.45□□□□□ -0.42
ACTR1A-202ENST00000470322 TMF1P82094 1093 aa12.44□□□□□ -0.42
ACTR1A-202ENST00000470322 RCAN3Q9UKA8 241 aa12.44□□□□□ -0.42
ACTR1A-202ENST00000470322 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
ACTR1A-202ENST00000470322 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
ACTR1A-202ENST00000470322 RGS3P49796 1198 aa12.43□□□□□ -0.42
ACTR1A-202ENST00000470322 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
ACTR1A-202ENST00000470322 ARHGEF11O15085 1522 aa12.43□□□□□ -0.42
ACTR1A-202ENST00000470322 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
ACTR1A-202ENST00000470322 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
ACTR1A-202ENST00000470322 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
ACTR1A-202ENST00000470322 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
ACTR1A-202ENST00000470322 MSH5O43196 834 aa12.41□□□□□ -0.42
ACTR1A-202ENST00000470322 CCDC144AA2RUR9 1427 aa12.41□□□□□ -0.42
ACTR1A-202ENST00000470322 UGGT2Q9NYU1 1516 aa12.41□□□□□ -0.42
ACTR1A-202ENST00000470322 KTN1Q86UP2 1357 aaKnown RBP12.41□□□□□ -0.42
ACTR1A-202ENST00000470322 KDM6BO15054 1643 aa12.4□□□□□ -0.42
ACTR1A-202ENST00000470322 KIAA0586Q9BVV6 1533 aa12.4□□□□□ -0.42
ACTR1A-202ENST00000470322 EFCAB2Q5VUJ9 269 aa12.4□□□□□ -0.42
ACTR1A-202ENST00000470322 NCOA1Q15788 1441 aa12.4□□□□□ -0.43
ACTR1A-202ENST00000470322 KIF21AQ7Z4S6 1674 aa12.39□□□□□ -0.43
ACTR1A-202ENST00000470322 CTTNBP2Q8WZ74 1663 aa12.39□□□□□ -0.43
ACTR1A-202ENST00000470322 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
ACTR1A-202ENST00000470322 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
ACTR1A-202ENST00000470322 NUP153P49790 1475 aaKnown RBP12.39□□□□□ -0.43
ACTR1A-202ENST00000470322 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
ACTR1A-202ENST00000470322 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
ACTR1A-202ENST00000470322 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
ACTR1A-202ENST00000470322 FRAT1Q92837 279 aaPredicted RBP12.38□□□□□ -0.43
ACTR1A-202ENST00000470322 MYBBP1AQ9BQG0 1328 aaKnown RBP12.38□□□□□ -0.43
ACTR1A-202ENST00000470322 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
ACTR1A-202ENST00000470322 CAMSAP2Q08AD1 1489 aa12.38□□□□□ -0.43
ACTR1A-202ENST00000470322 GRIN2AQ12879 1464 aa12.38□□□□□ -0.43
ACTR1A-202ENST00000470322 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
ACTR1A-202ENST00000470322 RALBP1Q15311 655 aa12.37□□□□□ -0.43
ACTR1A-202ENST00000470322 STK26Q9P289 416 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms