RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
LSM2-210ENST00000470086 HECW1Q76N89 1606 aa14.68□□□□□ -0.06
LSM2-210ENST00000470086 ZFYVE16Q7Z3T8 1539 aa14.67□□□□□ -0.06
LSM2-210ENST00000470086 CFAP74Q9C0B2 1584 aa14.67□□□□□ -0.06
LSM2-210ENST00000470086 ARHGEF12Q9NZN5 1544 aa14.66□□□□□ -0.06
LSM2-210ENST00000470086 LTBP4Q8N2S1 1624 aa14.65□□□□□ -0.06
LSM2-210ENST00000470086 FANCAO15360 1455 aa14.64□□□□□ -0.07
LSM2-210ENST00000470086 C3P01024 1663 aa14.64□□□□□ -0.07
LSM2-210ENST00000470086 EFCAB5A4FU69 1503 aa14.63□□□□□ -0.07
LSM2-210ENST00000470086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.63□□□□□ -0.073e-6■□□□□ 9.2
LSM2-210ENST00000470086 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
LSM2-210ENST00000470086 NUP153P49790 1475 aaKnown RBP14.63□□□□□ -0.07
LSM2-210ENST00000470086 FHOD3Q2V2M9 1422 aa14.61□□□□□ -0.07
LSM2-210ENST00000470086 DENND4BO75064 1496 aaPredicted RBP14.6□□□□□ -0.07
LSM2-210ENST00000470086 PHLDB1Q86UU1 1377 aa14.59□□□□□ -0.07
LSM2-210ENST00000470086 PRXQ9BXM0 1461 aa14.58□□□□□ -0.08
LSM2-210ENST00000470086 AKNAQ7Z591 1439 aa14.57□□□□□ -0.08
LSM2-210ENST00000470086 ABCA6Q8N139 1617 aa14.54□□□□□ -0.08
LSM2-210ENST00000470086 MYO5CQ9NQX4 1742 aa14.54□□□□□ -0.08
LSM2-210ENST00000470086 P3H3Q8IVL6 736 aa14.53□□□□□ -0.08
LSM2-210ENST00000470086 DIP2CQ9Y2E4 1556 aa14.52□□□□□ -0.08
LSM2-210ENST00000470086 POGZQ7Z3K3 1410 aa14.52□□□□□ -0.08
LSM2-210ENST00000470086 MLECQ14165 292 aa14.51□□□□□ -0.09
LSM2-210ENST00000470086 LRRIQ1Q96JM4 1722 aa14.51□□□□□ -0.09
LSM2-210ENST00000470086 CDK13Q14004 1512 aaKnown RBP14.51□□□□□ -0.09
LSM2-210ENST00000470086 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
LSM2-210ENST00000470086 MED1Q15648 1581 aaPredicted RBP14.5□□□□□ -0.09
LSM2-210ENST00000470086 KIF14Q15058 1648 aa14.49□□□□□ -0.09
LSM2-210ENST00000470086 CEBPAP49715 358 aaPredicted RBP14.49□□□□□ -0.09
LSM2-210ENST00000470086 KDM5CP41229 1560 aa14.47□□□□□ -0.09
LSM2-210ENST00000470086 SETD1BQ9UPS6 1966 aaKnown RBP14.47□□□□□ -0.09
LSM2-210ENST00000470086 SUPT6HQ7KZ85 1726 aaKnown RBP14.47□□□□□ -0.09
LSM2-210ENST00000470086 MAGI2Q86UL8 1455 aa14.47□□□□□ -0.09
LSM2-210ENST00000470086 C9orf84Q5VXU9 1444 aa14.47□□□□□ -0.09
LSM2-210ENST00000470086 UHRF1BP1Q6BDS2 1440 aa14.46□□□□□ -0.09
LSM2-210ENST00000470086 IQSEC2Q5JU85 1478 aa14.45□□□□□ -0.1
LSM2-210ENST00000470086 PTPRTO14522 1441 aa14.45□□□□□ -0.1
LSM2-210ENST00000470086 ZNF142P52746 1687 aaPredicted RBP14.44□□□□□ -0.1
LSM2-210ENST00000470086 CDC42BPBQ9Y5S2 1711 aa14.43□□□□□ -0.1
LSM2-210ENST00000470086 ATP10AO60312 1499 aa14.43□□□□□ -0.1
LSM2-210ENST00000470086 REREQ9P2R6 1566 aa14.43□□□□□ -0.1
LSM2-210ENST00000470086 NCOA1Q15788 1441 aa14.42□□□□□ -0.1
LSM2-210ENST00000470086 CAMSAP1Q5T5Y3 1602 aa14.42□□□□□ -0.1
LSM2-210ENST00000470086 MYO3AQ8NEV4 1616 aa14.42□□□□□ -0.1
LSM2-210ENST00000470086 ITSN2Q9NZM3 1697 aa14.41□□□□□ -0.1
LSM2-210ENST00000470086 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
LSM2-210ENST00000470086 KIDINS220Q9ULH0 1771 aa14.39□□□□□ -0.11
LSM2-210ENST00000470086 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
LSM2-210ENST00000470086 ALKQ9UM73 1620 aa14.37□□□□□ -0.11
LSM2-210ENST00000470086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
LSM2-210ENST00000470086 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
LSM2-210ENST00000470086 CLTCQ00610 1675 aaKnown RBP14.36□□□□□ -0.11
LSM2-210ENST00000470086 POLR1AO95602 1720 aaPredicted RBP14.35□□□□□ -0.11
LSM2-210ENST00000470086 PLCH2O75038 1416 aa14.34□□□□□ -0.11
LSM2-210ENST00000470086 PREX2Q70Z35 1606 aa14.33□□□□□ -0.11
LSM2-210ENST00000470086 ZNF518AQ6AHZ1 1483 aa14.32□□□□□ -0.12
LSM2-210ENST00000470086 ABCC1P33527 1531 aa14.32□□□□□ -0.12
LSM2-210ENST00000470086 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
LSM2-210ENST00000470086 CDC42BPAQ5VT25 1732 aa14.31□□□□□ -0.12
LSM2-210ENST00000470086 AGLP35573 1532 aa14.31□□□□□ -0.12
LSM2-210ENST00000470086 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
LSM2-210ENST00000470086 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
LSM2-210ENST00000470086 ARHGAP5Q13017 1502 aa14.29□□□□□ -0.12
LSM2-210ENST00000470086 STRCP1A6NGW2 1772 aa14.28□□□□□ -0.12
LSM2-210ENST00000470086 TCOF1Q13428 1488 aaKnown RBP14.26□□□□□ -0.13
LSM2-210ENST00000470086 RANGAP1P46060 587 aaPredicted RBP14.26□□□□□ -0.13
LSM2-210ENST00000470086 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
LSM2-210ENST00000470086 TRAPPC8Q9Y2L5 1435 aa14.25□□□□□ -0.13
LSM2-210ENST00000470086 MLH3Q9UHC1 1453 aa14.24□□□□□ -0.13
LSM2-210ENST00000470086 PLXNC1O60486 1568 aa14.23□□□□□ -0.13
LSM2-210ENST00000470086 PLEKHD1A6NEE1 506 aa14.23□□□□□ -0.13
LSM2-210ENST00000470086 NCKAP5LQ9HCH0 1330 aa14.22□□□□□ -0.13
LSM2-210ENST00000470086 UBAP1LF5GYI3 381 aa14.22□□□□□ -0.13
LSM2-210ENST00000470086 AFAP1Q8N556 730 aa14.22□□□□□ -0.13
LSM2-210ENST00000470086 DNMT1P26358 1616 aaKnown RBP14.22□□□□□ -0.13
LSM2-210ENST00000470086 SAMD9LQ8IVG5 1584 aa14.22□□□□□ -0.13
LSM2-210ENST00000470086 PLA2R1Q13018 1463 aa14.21□□□□□ -0.13
LSM2-210ENST00000470086 HSPA1LP34931 641 aa14.21□□□□□ -0.13
LSM2-210ENST00000470086 INO80Q9ULG1 1556 aaPredicted RBP14.21□□□□□ -0.14
LSM2-210ENST00000470086 VWDEQ8N2E2 1590 aa14.19□□□□□ -0.14
LSM2-210ENST00000470086 NPATQ14207 1427 aa14.18□□□□□ -0.14
LSM2-210ENST00000470086 XIRP1Q702N8 1843 aaKnown RBP14.18□□□□□ -0.14
LSM2-210ENST00000470086 SYCP2Q9BX26 1530 aa14.16□□□□□ -0.14
LSM2-210ENST00000470086 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
LSM2-210ENST00000470086 ADGBQ8N7X0 1667 aa14.15□□□□□ -0.14
LSM2-210ENST00000470086 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
LSM2-210ENST00000470086 CNTLNQ9NXG0 1405 aa14.15□□□□□ -0.14
LSM2-210ENST00000470086 PTPRKQ15262 1439 aa14.14□□□□□ -0.15
LSM2-210ENST00000470086 ARHGAP35Q9NRY4 1499 aa14.13□□□□□ -0.15
LSM2-210ENST00000470086 RNF17Q9BXT8 1623 aaKnown RBP14.12□□□□□ -0.15
LSM2-210ENST00000470086 ATP7AQ04656 1500 aa14.12□□□□□ -0.15
LSM2-210ENST00000470086 CPS1P31327 1500 aa14.11□□□□□ -0.15
LSM2-210ENST00000470086 EFCAB2Q5VUJ9 269 aa14.11□□□□□ -0.15
LSM2-210ENST00000470086 PIP4K2BP78356 416 aa14.1□□□□□ -0.15
LSM2-210ENST00000470086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.15
LSM2-210ENST00000470086 ZC3H13Q5T200 1668 aaKnown RBP14.1□□□□□ -0.15
LSM2-210ENST00000470086 ZMYM3Q14202 1370 aa14.09□□□□□ -0.15
LSM2-210ENST00000470086 IQGAP1P46940 1657 aa14.09□□□□□ -0.15
LSM2-210ENST00000470086 SYNMO15061 1565 aa14.08□□□□□ -0.16
LSM2-210ENST00000470086 A2ML1A8K2U0 1454 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms