RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 EIF3AQ14152 1382 aaKnown RBP19.66■□□□□ 0.74
LIMS2-213ENST00000469300 MS4A1P11836 297 aa19.65■□□□□ 0.74
LIMS2-213ENST00000469300 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
LIMS2-213ENST00000469300 EID1Q9Y6B2 187 aa19.64■□□□□ 0.73
LIMS2-213ENST00000469300 HSPA5P11021 654 aaKnown RBP19.64■□□□□ 0.73
LIMS2-213ENST00000469300 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.73
LIMS2-213ENST00000469300 MORC1Q86VD1 984 aa19.63■□□□□ 0.73
LIMS2-213ENST00000469300 ROCK2O75116 1388 aaKnown RBP19.63■□□□□ 0.73
LIMS2-213ENST00000469300 CYB5RLQ6IPT4 315 aa19.63■□□□□ 0.73
LIMS2-213ENST00000469300 U2SURPO15042 1029 aaKnown RBP19.62■□□□□ 0.73
LIMS2-213ENST00000469300 FOXD1Q16676 465 aa19.62■□□□□ 0.73
LIMS2-213ENST00000469300 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
LIMS2-213ENST00000469300 FTSJ3Q8IY81 847 aaKnown RBP19.6■□□□□ 0.73
LIMS2-213ENST00000469300 TNNT2P45379 298 aaPredicted RBP19.6■□□□□ 0.73
LIMS2-213ENST00000469300 NEUROD2Q15784 382 aa19.6■□□□□ 0.73
LIMS2-213ENST00000469300 STK26Q9P289 416 aa19.6■□□□□ 0.73
LIMS2-213ENST00000469300 ANP32BQ92688 251 aaKnown RBP19.58■□□□□ 0.73
LIMS2-213ENST00000469300 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.73
LIMS2-213ENST00000469300 NBR1Q14596 966 aa19.58■□□□□ 0.72
LIMS2-213ENST00000469300 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.72
LIMS2-213ENST00000469300 SAFB2Q14151 953 aaKnown RBP eCLIP19.57■□□□□ 0.72
LIMS2-213ENST00000469300 KTN1Q86UP2 1357 aaKnown RBP19.57■□□□□ 0.72
LIMS2-213ENST00000469300 UACAQ9BZF9 1416 aa19.55■□□□□ 0.72
LIMS2-213ENST00000469300 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
LIMS2-213ENST00000469300 LAS1LQ9Y4W2 734 aaKnown RBP19.54■□□□□ 0.72
LIMS2-213ENST00000469300 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
LIMS2-213ENST00000469300 MYOM3Q5VTT5 1437 aa19.54■□□□□ 0.72
LIMS2-213ENST00000469300 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
LIMS2-213ENST00000469300 RALBP1Q15311 655 aa19.53■□□□□ 0.72
LIMS2-213ENST00000469300 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.71
LIMS2-213ENST00000469300 CCDC144AA2RUR9 1427 aa19.51■□□□□ 0.71
LIMS2-213ENST00000469300 SUPT16HQ9Y5B9 1047 aaKnown RBP19.5■□□□□ 0.71
LIMS2-213ENST00000469300 ARXQ96QS3 562 aa19.5■□□□□ 0.71
LIMS2-213ENST00000469300 VGFO15240 615 aaPredicted RBP19.48■□□□□ 0.71
LIMS2-213ENST00000469300 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
LIMS2-213ENST00000469300 CUX1P39880 1505 aa19.47■□□□□ 0.71
LIMS2-213ENST00000469300 CALD1Q05682 793 aaKnown RBP19.47■□□□□ 0.71
LIMS2-213ENST00000469300 CHMP4AQ9BY43 222 aa19.47■□□□□ 0.71
LIMS2-213ENST00000469300 CASC1Q6TDU7 716 aa19.46■□□□□ 0.71
LIMS2-213ENST00000469300 BECN1Q14457 450 aa19.45■□□□□ 0.7
LIMS2-213ENST00000469300 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
LIMS2-213ENST00000469300 STAC3Q96MF2 364 aa19.45■□□□□ 0.7
LIMS2-213ENST00000469300 CASKIN1Q8WXD9 1431 aa19.44■□□□□ 0.7
LIMS2-213ENST00000469300 TOPBP1Q92547 1522 aa19.44■□□□□ 0.7
LIMS2-213ENST00000469300 DDRGK1Q96HY6 314 aa19.43■□□□□ 0.7
LIMS2-213ENST00000469300 NESP48681 1621 aa19.42■□□□□ 0.7
LIMS2-213ENST00000469300 SOX12O15370 315 aa19.42■□□□□ 0.7
LIMS2-213ENST00000469300 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
LIMS2-213ENST00000469300 FAM69CQ0P6D2 419 aa19.41■□□□□ 0.7
LIMS2-213ENST00000469300 PPP4R2Q9NY27 417 aa19.4■□□□□ 0.7
LIMS2-213ENST00000469300 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
LIMS2-213ENST00000469300 KIF21BO75037 1637 aa19.4■□□□□ 0.7
LIMS2-213ENST00000469300 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
LIMS2-213ENST00000469300 SYNJ2O15056 1496 aa19.39■□□□□ 0.69
LIMS2-213ENST00000469300 U2AF1L5P0DN76 240 aaPredicted RBP19.37■□□□□ 0.69
LIMS2-213ENST00000469300 U2AF1Q01081 240 aaKnown RBP eCLIP19.37■□□□□ 0.69
LIMS2-213ENST00000469300 FYCO1Q9BQS8 1478 aa19.37■□□□□ 0.69
LIMS2-213ENST00000469300 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-213ENST00000469300 PRG4Q92954 1404 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-213ENST00000469300 NGDNQ8NEJ9 315 aaKnown RBP19.36■□□□□ 0.69
LIMS2-213ENST00000469300 DHX57Q6P158 1386 aaKnown RBP19.36■□□□□ 0.69
LIMS2-213ENST00000469300 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
LIMS2-213ENST00000469300 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
LIMS2-213ENST00000469300 NPHP1O15259 732 aa19.35■□□□□ 0.69
LIMS2-213ENST00000469300 IPO8O15397 1037 aaKnown RBP19.35■□□□□ 0.69
LIMS2-213ENST00000469300 KIF15Q9NS87 1388 aa19.34■□□□□ 0.69
LIMS2-213ENST00000469300 DNMBPQ6XZF7 1577 aa19.34■□□□□ 0.69
LIMS2-213ENST00000469300 LRRC9Q6ZRR7 1453 aa19.34■□□□□ 0.69
LIMS2-213ENST00000469300 SYNJ1O43426 1573 aa19.33■□□□□ 0.69
LIMS2-213ENST00000469300 NLRP13Q86W25 1043 aa19.33■□□□□ 0.69
LIMS2-213ENST00000469300 CSB-PGBD3P0DP91 1061 aa19.33■□□□□ 0.68
LIMS2-213ENST00000469300 PHLDB1Q86UU1 1377 aa19.32■□□□□ 0.68
LIMS2-213ENST00000469300 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
LIMS2-213ENST00000469300 TRAK1Q9UPV9 953 aa19.31■□□□□ 0.68
LIMS2-213ENST00000469300 OS9Q13438 667 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-213ENST00000469300 PRXQ9BXM0 1461 aa19.31■□□□□ 0.68
LIMS2-213ENST00000469300 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
LIMS2-213ENST00000469300 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
LIMS2-213ENST00000469300 EVC2Q86UK5 1308 aa19.29■□□□□ 0.68
LIMS2-213ENST00000469300 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
LIMS2-213ENST00000469300 GOLGA6L22H0YM25 854 aa19.27■□□□□ 0.68
LIMS2-213ENST00000469300 NCLP19338 710 aaKnown RBP19.27■□□□□ 0.68
LIMS2-213ENST00000469300 NUTM2DQ5VT03 806 aaPredicted RBP19.27■□□□□ 0.68
LIMS2-213ENST00000469300 NCOA2Q15596 1464 aa19.27■□□□□ 0.68
LIMS2-213ENST00000469300 LMOD3Q0VAK6 560 aa19.27■□□□□ 0.68
LIMS2-213ENST00000469300 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
LIMS2-213ENST00000469300 ANKRD50Q9ULJ7 1429 aa19.26■□□□□ 0.67
LIMS2-213ENST00000469300 ST20-MTHFSA0A0A6YYL1 179 aa19.26■□□□□ 0.67
LIMS2-213ENST00000469300 ERICH6BQ5W0A0 696 aa19.26■□□□□ 0.67
LIMS2-213ENST00000469300 PLEKHH2Q8IVE3 1493 aa19.25■□□□□ 0.67
LIMS2-213ENST00000469300 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
LIMS2-213ENST00000469300 HDAC5Q9UQL6 1122 aa19.24■□□□□ 0.67
LIMS2-213ENST00000469300 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
LIMS2-213ENST00000469300 B4GALNT3Q6L9W6 998 aa19.23■□□□□ 0.67
LIMS2-213ENST00000469300 AMPHP49418 695 aa19.23■□□□□ 0.67
LIMS2-213ENST00000469300 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
LIMS2-213ENST00000469300 ARHGAP5Q13017 1502 aa19.21■□□□□ 0.67
LIMS2-213ENST00000469300 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
LIMS2-213ENST00000469300 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
LIMS2-213ENST00000469300 CGNL1Q0VF96 1302 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms