RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 MIA2Q96PC5 1412 aa26.7■■□□□ 1.86
PCCB-209ENST00000469217 ARHGAP5Q13017 1502 aa26.69■■□□□ 1.86
PCCB-209ENST00000469217 ARAP3Q8WWN8 1544 aa26.68■■□□□ 1.86
PCCB-209ENST00000469217 ZNF777Q9ULD5 760 aaPredicted RBP26.66■■□□□ 1.86
PCCB-209ENST00000469217 RRBP1Q9P2E9 1410 aaKnown RBP26.65■■□□□ 1.86
PCCB-209ENST00000469217 EFCAB2Q5VUJ9 269 aa26.65■■□□□ 1.86
PCCB-209ENST00000469217 FANCAO15360 1455 aa26.64■■□□□ 1.86
PCCB-209ENST00000469217 ZNF644Q9H582 1327 aaPredicted RBP26.64■■□□□ 1.86
PCCB-209ENST00000469217 TSPOAP1O95153 1857 aa26.64■■□□□ 1.86
PCCB-209ENST00000469217 PTPN23Q9H3S7 1636 aa26.63■■□□□ 1.85
PCCB-209ENST00000469217 PPRC1Q5VV67 1664 aaKnown RBP26.62■■□□□ 1.85
PCCB-209ENST00000469217 SAMD9LQ8IVG5 1584 aa26.6■■□□□ 1.85
PCCB-209ENST00000469217 FAM50AQ14320 339 aaKnown RBP26.59■■□□□ 1.85
PCCB-209ENST00000469217 CAMSAP2Q08AD1 1489 aa26.59■■□□□ 1.85
PCCB-209ENST00000469217 TCOF1Q13428 1488 aaKnown RBP26.59■■□□□ 1.85
PCCB-209ENST00000469217 TEX14Q8IWB6 1497 aa26.56■■□□□ 1.84
PCCB-209ENST00000469217 CFAP74Q9C0B2 1584 aa26.55■■□□□ 1.84
PCCB-209ENST00000469217 AKNAQ7Z591 1439 aa26.55■■□□□ 1.84
PCCB-209ENST00000469217 NEO1Q92859 1461 aa26.55■■□□□ 1.84
PCCB-209ENST00000469217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.53■■□□□ 1.84
PCCB-209ENST00000469217 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
PCCB-209ENST00000469217 ABCC1P33527 1531 aa26.51■■□□□ 1.83
PCCB-209ENST00000469217 ADGRL1O94910 1474 aa26.51■■□□□ 1.83
PCCB-209ENST00000469217 HNRNPMP52272 730 aaKnown RBP eCLIP26.51■■□□□ 1.831e-7■■■□□ 18.3
PCCB-209ENST00000469217 PLEKHH2Q8IVE3 1493 aa26.51■■□□□ 1.83
PCCB-209ENST00000469217 SYCP2Q9BX26 1530 aa26.5■■□□□ 1.83
PCCB-209ENST00000469217 ARHGEF12Q9NZN5 1544 aa26.5■■□□□ 1.83
PCCB-209ENST00000469217 KIAA1107Q9UPP5 1409 aa26.5■■□□□ 1.83
PCCB-209ENST00000469217 MBD5Q9P267 1494 aa26.49■■□□□ 1.83
PCCB-209ENST00000469217 SCAPERQ9BY12 1400 aa26.47■■□□□ 1.83
PCCB-209ENST00000469217 ITGAEP38570 1179 aa26.44■■□□□ 1.82
PCCB-209ENST00000469217 ARHGEF5Q12774 1597 aa26.42■■□□□ 1.82
PCCB-209ENST00000469217 TRAPPC8Q9Y2L5 1435 aa26.42■■□□□ 1.82
PCCB-209ENST00000469217 DNMT1P26358 1616 aaKnown RBP26.42■■□□□ 1.82
PCCB-209ENST00000469217 ABCC5O15440 1437 aa26.42■■□□□ 1.82
PCCB-209ENST00000469217 DAPK1P53355 1430 aa26.42■■□□□ 1.82
PCCB-209ENST00000469217 RSPH4AQ5TD94 716 aa26.4■■□□□ 1.82
PCCB-209ENST00000469217 CCDC141Q6ZP82 1450 aa26.4■■□□□ 1.82
PCCB-209ENST00000469217 AFAP1Q8N556 730 aa26.39■■□□□ 1.82
PCCB-209ENST00000469217 DENND4BO75064 1496 aaPredicted RBP26.38■■□□□ 1.81
PCCB-209ENST00000469217 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
PCCB-209ENST00000469217 RAPGEF3O95398 923 aa26.37■■□□□ 1.81
PCCB-209ENST00000469217 POGZQ7Z3K3 1410 aa26.37■■□□□ 1.81
PCCB-209ENST00000469217 COL17A1Q9UMD9 1497 aaPredicted RBP26.37■■□□□ 1.81
PCCB-209ENST00000469217 ZNF518AQ6AHZ1 1483 aa26.35■■□□□ 1.81
PCCB-209ENST00000469217 CROCC2H7BZ55 1655 aa26.34■■□□□ 1.81
PCCB-209ENST00000469217 TSPY4P0CV99 314 aa26.34■■□□□ 1.81
PCCB-209ENST00000469217 TSPY10P0CW01 314 aa26.34■■□□□ 1.81
PCCB-209ENST00000469217 RICTORQ6R327 1708 aa26.33■■□□□ 1.81
PCCB-209ENST00000469217 CHIC2Q9UKJ5 165 aa26.32■■□□□ 1.8
PCCB-209ENST00000469217 PCGF6Q9BYE7 350 aa26.31■■□□□ 1.8
PCCB-209ENST00000469217 FRMPD1Q5SYB0 1578 aa26.31■■□□□ 1.8
PCCB-209ENST00000469217 SHANK2Q9UPX8 1470 aa26.3■■□□□ 1.8
PCCB-209ENST00000469217 KDM5CP41229 1560 aa26.3■■□□□ 1.8
PCCB-209ENST00000469217 C9orf84Q5VXU9 1444 aa26.3■■□□□ 1.8
PCCB-209ENST00000469217 SPAG9O60271 1321 aaKnown RBP26.29■■□□□ 1.8
PCCB-209ENST00000469217 KDM6BO15054 1643 aa26.26■■□□□ 1.79
PCCB-209ENST00000469217 MAST1Q9Y2H9 1570 aa26.26■■□□□ 1.79
PCCB-209ENST00000469217 ZFYVE16Q7Z3T8 1539 aa26.23■■□□□ 1.79
PCCB-209ENST00000469217 INO80Q9ULG1 1556 aaPredicted RBP26.23■■□□□ 1.79
PCCB-209ENST00000469217 RTEL1-TNFRSF6BF6WH68 1400 aa26.23■■□□□ 1.79
PCCB-209ENST00000469217 MLH3Q9UHC1 1453 aa26.23■■□□□ 1.79
PCCB-209ENST00000469217 MYT1LQ9UL68 1186 aa26.23■■□□□ 1.79
PCCB-209ENST00000469217 ADGRL2O95490 1459 aa26.22■■□□□ 1.79
PCCB-209ENST00000469217 ATP7AQ04656 1500 aa26.22■■□□□ 1.79
PCCB-209ENST00000469217 HECW2Q9P2P5 1572 aa26.22■■□□□ 1.79
PCCB-209ENST00000469217 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
PCCB-209ENST00000469217 ZMYM4Q5VZL5 1548 aa26.21■■□□□ 1.79
PCCB-209ENST00000469217 ADGBQ8N7X0 1667 aa26.21■■□□□ 1.79
PCCB-209ENST00000469217 ROCK1Q13464 1354 aa26.21■■□□□ 1.79
PCCB-209ENST00000469217 KIDINS220Q9ULH0 1771 aa26.21■■□□□ 1.79
PCCB-209ENST00000469217 RRP7BPQ9NSQ0 103 aa26.2■■□□□ 1.78
PCCB-209ENST00000469217 ANKRD30AQ9BXX3 1397 aa26.2■■□□□ 1.78
PCCB-209ENST00000469217 PLXNC1O60486 1568 aa26.16■■□□□ 1.78
PCCB-209ENST00000469217 MAGI2Q86UL8 1455 aa26.15■■□□□ 1.78
PCCB-209ENST00000469217 YEATS2Q9ULM3 1422 aa26.15■■□□□ 1.78
PCCB-209ENST00000469217 HFM1A2PYH4 1435 aa26.14■■□□□ 1.78
PCCB-209ENST00000469217 KIF15Q9NS87 1388 aa26.14■■□□□ 1.78
PCCB-209ENST00000469217 NAIPQ13075 1403 aa26.13■■□□□ 1.77
PCCB-209ENST00000469217 ABCA6Q8N139 1617 aa26.11■■□□□ 1.77
PCCB-209ENST00000469217 DIP2CQ9Y2E4 1556 aa26.09■■□□□ 1.77
PCCB-209ENST00000469217 GCC2Q8IWJ2 1684 aa26.08■■□□□ 1.77
PCCB-209ENST00000469217 SETD5Q9C0A6 1442 aa26.07■■□□□ 1.76
PCCB-209ENST00000469217 DUOX2Q9NRD8 1548 aa26.06■■□□□ 1.76
PCCB-209ENST00000469217 ARHGEF40Q8TER5 1519 aa26.05■■□□□ 1.76
PCCB-209ENST00000469217 ANKRD50Q9ULJ7 1429 aa26.05■■□□□ 1.76
PCCB-209ENST00000469217 A2MP01023 1474 aa26.04■■□□□ 1.76
PCCB-209ENST00000469217 DHX29Q7Z478 1369 aaKnown RBP26.04■■□□□ 1.76
PCCB-209ENST00000469217 ATP10AO60312 1499 aa26.03■■□□□ 1.76
PCCB-209ENST00000469217 RAB3GAP2Q9H2M9 1393 aa26.01■■□□□ 1.75
PCCB-209ENST00000469217 ERBINQ96RT1 1412 aa26■■□□□ 1.75
PCCB-209ENST00000469217 REREQ9P2R6 1566 aa25.96■■□□□ 1.75
PCCB-209ENST00000469217 KIF3BO15066 747 aa25.93■■□□□ 1.74
PCCB-209ENST00000469217 SIGLEC1Q9BZZ2 1709 aa25.93■■□□□ 1.74
PCCB-209ENST00000469217 EIF2AK4Q9P2K8 1649 aaKnown RBP25.92■■□□□ 1.74
PCCB-209ENST00000469217 HRCP23327 699 aa25.91■■□□□ 1.74
PCCB-209ENST00000469217 AGLP35573 1532 aa25.89■■□□□ 1.73
PCCB-209ENST00000469217 BCORL1Q5H9F3 1711 aa25.88■■□□□ 1.73
PCCB-209ENST00000469217 TRIM52Q96A61 297 aa25.84■■□□□ 1.73
PCCB-209ENST00000469217 GGT6Q6P531 493 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms