RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 MAP3K4Q9Y6R4 1608 aa26.72■■□□□ 1.87
RPL39-202ENST00000468844 ARHGAP5Q13017 1502 aa26.71■■□□□ 1.87
RPL39-202ENST00000468844 ARAP3Q8WWN8 1544 aa26.71■■□□□ 1.87
RPL39-202ENST00000468844 CFDP1Q9UEE9 299 aaPredicted RBP26.71■■□□□ 1.87
RPL39-202ENST00000468844 PLCH2O75038 1416 aa26.7■■□□□ 1.87
RPL39-202ENST00000468844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.69■■□□□ 1.86
RPL39-202ENST00000468844 CAMSAP2Q08AD1 1489 aa26.69■■□□□ 1.86
RPL39-202ENST00000468844 SAMD9LQ8IVG5 1584 aa26.69■■□□□ 1.86
RPL39-202ENST00000468844 FAM50AQ14320 339 aaKnown RBP26.67■■□□□ 1.86
RPL39-202ENST00000468844 ZNF644Q9H582 1327 aaPredicted RBP26.65■■□□□ 1.86
RPL39-202ENST00000468844 TSPOAP1O95153 1857 aa26.65■■□□□ 1.86
RPL39-202ENST00000468844 CD109Q6YHK3 1445 aa26.63■■□□□ 1.85
RPL39-202ENST00000468844 ZNF777Q9ULD5 760 aaPredicted RBP26.62■■□□□ 1.85
RPL39-202ENST00000468844 DNMT1P26358 1616 aaKnown RBP26.61■■□□□ 1.85
RPL39-202ENST00000468844 PPRC1Q5VV67 1664 aaKnown RBP26.6■■□□□ 1.85
RPL39-202ENST00000468844 FANCAO15360 1455 aa26.59■■□□□ 1.85
RPL39-202ENST00000468844 FAM69CQ0P6D2 419 aa26.59■■□□□ 1.85
RPL39-202ENST00000468844 CROCC2H7BZ55 1655 aa26.59■■□□□ 1.85
RPL39-202ENST00000468844 CFAP74Q9C0B2 1584 aa26.58■■□□□ 1.85
RPL39-202ENST00000468844 ABCC1P33527 1531 aa26.56■■□□□ 1.84
RPL39-202ENST00000468844 SYCP2Q9BX26 1530 aa26.56■■□□□ 1.84
RPL39-202ENST00000468844 ITGAEP38570 1179 aa26.55■■□□□ 1.84
RPL39-202ENST00000468844 EFCAB2Q5VUJ9 269 aa26.55■■□□□ 1.84
RPL39-202ENST00000468844 ARHGEF5Q12774 1597 aa26.54■■□□□ 1.84
RPL39-202ENST00000468844 PTPRKQ15262 1439 aa26.52■■□□□ 1.84
RPL39-202ENST00000468844 MBD5Q9P267 1494 aa26.52■■□□□ 1.84
RPL39-202ENST00000468844 PLEKHH2Q8IVE3 1493 aa26.51■■□□□ 1.83
RPL39-202ENST00000468844 DAPK1P53355 1430 aa26.51■■□□□ 1.83
RPL39-202ENST00000468844 ARHGEF12Q9NZN5 1544 aa26.51■■□□□ 1.83
RPL39-202ENST00000468844 ABCC5O15440 1437 aa26.5■■□□□ 1.83
RPL39-202ENST00000468844 KIAA1107Q9UPP5 1409 aa26.49■■□□□ 1.83
RPL39-202ENST00000468844 ADGBQ8N7X0 1667 aa26.47■■□□□ 1.83
RPL39-202ENST00000468844 ADGRL1O94910 1474 aa26.47■■□□□ 1.83
RPL39-202ENST00000468844 AKNAQ7Z591 1439 aa26.47■■□□□ 1.83
RPL39-202ENST00000468844 NEO1Q92859 1461 aa26.46■■□□□ 1.83
RPL39-202ENST00000468844 HNRNPMP52272 730 aaKnown RBP eCLIP26.46■■□□□ 1.83
RPL39-202ENST00000468844 CCDC141Q6ZP82 1450 aa26.45■■□□□ 1.82
RPL39-202ENST00000468844 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
RPL39-202ENST00000468844 TEX14Q8IWB6 1497 aa26.41■■□□□ 1.82
RPL39-202ENST00000468844 SCAPERQ9BY12 1400 aa26.4■■□□□ 1.82
RPL39-202ENST00000468844 TRAPPC8Q9Y2L5 1435 aa26.4■■□□□ 1.82
RPL39-202ENST00000468844 GCC2Q8IWJ2 1684 aa26.39■■□□□ 1.81
RPL39-202ENST00000468844 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
RPL39-202ENST00000468844 RICTORQ6R327 1708 aa26.38■■□□□ 1.81
RPL39-202ENST00000468844 RSPH4AQ5TD94 716 aa26.37■■□□□ 1.81
RPL39-202ENST00000468844 CHIC2Q9UKJ5 165 aa26.37■■□□□ 1.81
RPL39-202ENST00000468844 C9orf84Q5VXU9 1444 aa26.37■■□□□ 1.81
RPL39-202ENST00000468844 ADGRL2O95490 1459 aa26.35■■□□□ 1.81
RPL39-202ENST00000468844 TRHP20396 242 aaPredicted RBP26.33■■□□□ 1.81
RPL39-202ENST00000468844 KDM5CP41229 1560 aa26.32■■□□□ 1.8
RPL39-202ENST00000468844 ZNF518AQ6AHZ1 1483 aa26.32■■□□□ 1.8
RPL39-202ENST00000468844 HFM1A2PYH4 1435 aa26.32■■□□□ 1.8
RPL39-202ENST00000468844 POGZQ7Z3K3 1410 aa26.32■■□□□ 1.8
RPL39-202ENST00000468844 ROCK1Q13464 1354 aa26.32■■□□□ 1.8
RPL39-202ENST00000468844 INO80Q9ULG1 1556 aaPredicted RBP26.31■■□□□ 1.8
RPL39-202ENST00000468844 TSPY4P0CV99 314 aa26.31■■□□□ 1.8
RPL39-202ENST00000468844 TSPY10P0CW01 314 aa26.31■■□□□ 1.8
RPL39-202ENST00000468844 AFAP1Q8N556 730 aa26.31■■□□□ 1.8
RPL39-202ENST00000468844 ZFYVE16Q7Z3T8 1539 aa26.3■■□□□ 1.8
RPL39-202ENST00000468844 NCOA1Q15788 1441 aa26.3■■□□□ 1.8
RPL39-202ENST00000468844 NAIPQ13075 1403 aa26.29■■□□□ 1.8
RPL39-202ENST00000468844 PLXNC1O60486 1568 aa26.29■■□□□ 1.8
RPL39-202ENST00000468844 FRMPD1Q5SYB0 1578 aa26.29■■□□□ 1.8
RPL39-202ENST00000468844 KIDINS220Q9ULH0 1771 aa26.29■■□□□ 1.8
RPL39-202ENST00000468844 DENND4BO75064 1496 aaPredicted RBP26.28■■□□□ 1.8
RPL39-202ENST00000468844 RRP7BPQ9NSQ0 103 aa26.27■■□□□ 1.8
RPL39-202ENST00000468844 ATP7AQ04656 1500 aa26.26■■□□□ 1.79
RPL39-202ENST00000468844 SETD5Q9C0A6 1442 aa26.26■■□□□ 1.79
RPL39-202ENST00000468844 HECW2Q9P2P5 1572 aa26.25■■□□□ 1.79
RPL39-202ENST00000468844 ANKRD30AQ9BXX3 1397 aa26.25■■□□□ 1.79
RPL39-202ENST00000468844 KDM6BO15054 1643 aa26.24■■□□□ 1.79
RPL39-202ENST00000468844 RAB3GAP2Q9H2M9 1393 aa26.23■■□□□ 1.79
RPL39-202ENST00000468844 RTEL1-TNFRSF6BF6WH68 1400 aa26.22■■□□□ 1.79
RPL39-202ENST00000468844 SPAG9O60271 1321 aaKnown RBP26.22■■□□□ 1.79
RPL39-202ENST00000468844 RAPGEF3O95398 923 aa26.22■■□□□ 1.79
RPL39-202ENST00000468844 COL17A1Q9UMD9 1497 aaPredicted RBP26.2■■□□□ 1.78
RPL39-202ENST00000468844 KIF15Q9NS87 1388 aa26.19■■□□□ 1.78
RPL39-202ENST00000468844 MLH3Q9UHC1 1453 aa26.19■■□□□ 1.78
RPL39-202ENST00000468844 ZMYM4Q5VZL5 1548 aa26.18■■□□□ 1.78
RPL39-202ENST00000468844 ABCA6Q8N139 1617 aa26.16■■□□□ 1.78
RPL39-202ENST00000468844 DUOX2Q9NRD8 1548 aa26.13■■□□□ 1.77
RPL39-202ENST00000468844 ANKRD50Q9ULJ7 1429 aa26.12■■□□□ 1.77
RPL39-202ENST00000468844 DIP2CQ9Y2E4 1556 aa26.11■■□□□ 1.77
RPL39-202ENST00000468844 MYT1LQ9UL68 1186 aa26.09■■□□□ 1.77
RPL39-202ENST00000468844 HRCP23327 699 aa26.07■■□□□ 1.76
RPL39-202ENST00000468844 ERBINQ96RT1 1412 aa26.06■■□□□ 1.76
RPL39-202ENST00000468844 YEATS2Q9ULM3 1422 aa26.06■■□□□ 1.76
RPL39-202ENST00000468844 MAGI2Q86UL8 1455 aa26.06■■□□□ 1.76
RPL39-202ENST00000468844 EIF2AK4Q9P2K8 1649 aaKnown RBP26.04■■□□□ 1.76
RPL39-202ENST00000468844 A2MP01023 1474 aa26.01■■□□□ 1.75
RPL39-202ENST00000468844 ARHGEF40Q8TER5 1519 aa26.01■■□□□ 1.75
RPL39-202ENST00000468844 UNC13BO14795 1591 aa26■■□□□ 1.75
RPL39-202ENST00000468844 BCORL1Q5H9F3 1711 aa26■■□□□ 1.75
RPL39-202ENST00000468844 DHX29Q7Z478 1369 aaKnown RBP25.99■■□□□ 1.75
RPL39-202ENST00000468844 DEPDC5O75140 1603 aa25.99■■□□□ 1.75
RPL39-202ENST00000468844 DHX57Q6P158 1386 aaKnown RBP25.97■■□□□ 1.75
RPL39-202ENST00000468844 SIGLEC1Q9BZZ2 1709 aa25.96■■□□□ 1.75
RPL39-202ENST00000468844 REREQ9P2R6 1566 aa25.95■■□□□ 1.74
RPL39-202ENST00000468844 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
RPL39-202ENST00000468844 RNF17Q9BXT8 1623 aaKnown RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms