RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 PLCH2O75038 1416 aa15.4■□□□□ 0.06
PMF1-204ENST00000466489 CDC42BPAQ5VT25 1732 aa15.4■□□□□ 0.06
PMF1-204ENST00000466489 FANCAO15360 1455 aa15.4■□□□□ 0.06
PMF1-204ENST00000466489 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
PMF1-204ENST00000466489 AEBP2Q6ZN18 517 aaPredicted RBP15.39■□□□□ 0.05
PMF1-204ENST00000466489 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
PMF1-204ENST00000466489 CDC42BPBQ9Y5S2 1711 aa15.37■□□□□ 0.05
PMF1-204ENST00000466489 NCOA2Q15596 1464 aa15.36■□□□□ 0.05
PMF1-204ENST00000466489 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
PMF1-204ENST00000466489 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
PMF1-204ENST00000466489 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
PMF1-204ENST00000466489 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
PMF1-204ENST00000466489 CFDP1Q9UEE9 299 aaPredicted RBP15.32■□□□□ 0.04
PMF1-204ENST00000466489 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
PMF1-204ENST00000466489 PLEKHH2Q8IVE3 1493 aa15.31■□□□□ 0.04
PMF1-204ENST00000466489 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
PMF1-204ENST00000466489 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
PMF1-204ENST00000466489 ABCC1P33527 1531 aa15.27■□□□□ 0.03
PMF1-204ENST00000466489 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
PMF1-204ENST00000466489 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
PMF1-204ENST00000466489 RICTORQ6R327 1708 aa15.26■□□□□ 0.03
PMF1-204ENST00000466489 SAMD9LQ8IVG5 1584 aa15.26■□□□□ 0.03
PMF1-204ENST00000466489 ZNF518AQ6AHZ1 1483 aa15.26■□□□□ 0.03
PMF1-204ENST00000466489 POGZQ7Z3K3 1410 aa15.25■□□□□ 0.03
PMF1-204ENST00000466489 MIA2Q96PC5 1412 aa15.25■□□□□ 0.03
PMF1-204ENST00000466489 COL17A1Q9UMD9 1497 aaPredicted RBP15.23■□□□□ 0.03
PMF1-204ENST00000466489 KIAA1107Q9UPP5 1409 aa15.23■□□□□ 0.03
PMF1-204ENST00000466489 SYCP2Q9BX26 1530 aa15.22■□□□□ 0.03
PMF1-204ENST00000466489 FRMPD1Q5SYB0 1578 aa15.22■□□□□ 0.03
PMF1-204ENST00000466489 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
PMF1-204ENST00000466489 CAMSAP2Q08AD1 1489 aa15.21■□□□□ 0.03
PMF1-204ENST00000466489 RAPGEF3O95398 923 aa15.21■□□□□ 0.03
PMF1-204ENST00000466489 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
PMF1-204ENST00000466489 MYT1LQ9UL68 1186 aa15.2■□□□□ 0.02
PMF1-204ENST00000466489 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
PMF1-204ENST00000466489 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
PMF1-204ENST00000466489 KDM5CP41229 1560 aa15.19■□□□□ 0.02
PMF1-204ENST00000466489 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
PMF1-204ENST00000466489 RSPH4AQ5TD94 716 aa15.18■□□□□ 0.02
PMF1-204ENST00000466489 ZFYVE16Q7Z3T8 1539 aa15.17■□□□□ 0.02
PMF1-204ENST00000466489 ARHGEF40Q8TER5 1519 aa15.17■□□□□ 0.02
PMF1-204ENST00000466489 ARHGEF5Q12774 1597 aa15.16■□□□□ 0.02
PMF1-204ENST00000466489 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
PMF1-204ENST00000466489 HNRNPMP52272 730 aaKnown RBP eCLIP15.16■□□□□ 0.02
PMF1-204ENST00000466489 ARHGEF12Q9NZN5 1544 aa15.15■□□□□ 0.02
PMF1-204ENST00000466489 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
PMF1-204ENST00000466489 ZNF644Q9H582 1327 aaPredicted RBP15.15■□□□□ 0.02
PMF1-204ENST00000466489 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
PMF1-204ENST00000466489 AFAP1Q8N556 730 aa15.14■□□□□ 0.01
PMF1-204ENST00000466489 SPAG9O60271 1321 aaKnown RBP15.14■□□□□ 0.01
PMF1-204ENST00000466489 MLH3Q9UHC1 1453 aa15.14■□□□□ 0.01
PMF1-204ENST00000466489 TCOF1Q13428 1488 aaKnown RBP15.13■□□□□ 0.01
PMF1-204ENST00000466489 TSPY4P0CV99 314 aa15.12■□□□□ 0.01
PMF1-204ENST00000466489 TSPY10P0CW01 314 aa15.12■□□□□ 0.01
PMF1-204ENST00000466489 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
PMF1-204ENST00000466489 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
PMF1-204ENST00000466489 FAM50AQ14320 339 aaKnown RBP15.11■□□□□ 0.01
PMF1-204ENST00000466489 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
PMF1-204ENST00000466489 CROCC2H7BZ55 1655 aa15.1■□□□□ 0.01
PMF1-204ENST00000466489 KIDINS220Q9ULH0 1771 aa15.1■□□□□ 0.01
PMF1-204ENST00000466489 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
PMF1-204ENST00000466489 ADGBQ8N7X0 1667 aa15.09■□□□□ 0.01
PMF1-204ENST00000466489 RTEL1-TNFRSF6BF6WH68 1400 aa15.09■□□□□ 0.01
PMF1-204ENST00000466489 C9orf84Q5VXU9 1444 aa15.09■□□□□ 0.01
PMF1-204ENST00000466489 ATP10AO60312 1499 aa15.08■□□□□ 0.01
PMF1-204ENST00000466489 DIP2CQ9Y2E4 1556 aa15.08■□□□□ 0
PMF1-204ENST00000466489 ABCA6Q8N139 1617 aa15.08■□□□□ 0
PMF1-204ENST00000466489 YEATS2Q9ULM3 1422 aa15.08■□□□□ 0
PMF1-204ENST00000466489 SHANK2Q9UPX8 1470 aa15.08■□□□□ 0
PMF1-204ENST00000466489 MAST1Q9Y2H9 1570 aa15.07■□□□□ 0
PMF1-204ENST00000466489 ARID4BQ4LE39 1312 aaPredicted RBP15.06■□□□□ 0
PMF1-204ENST00000466489 REREQ9P2R6 1566 aa15.06■□□□□ 0
PMF1-204ENST00000466489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.05■□□□□ -0
PMF1-204ENST00000466489 DAPK1P53355 1430 aa15.05■□□□□ -0
PMF1-204ENST00000466489 RRBP1Q9P2E9 1410 aaKnown RBP15.04■□□□□ -0
PMF1-204ENST00000466489 PLXNC1O60486 1568 aa15.03■□□□□ -0
PMF1-204ENST00000466489 ABCC5O15440 1437 aa15.02■□□□□ -0
PMF1-204ENST00000466489 A2MP01023 1474 aa15.01□□□□□ -0.01
PMF1-204ENST00000466489 ANKRD30AQ9BXX3 1397 aa15□□□□□ -0.01
PMF1-204ENST00000466489 BCORL1Q5H9F3 1711 aa15□□□□□ -0.01
PMF1-204ENST00000466489 AGLP35573 1532 aa14.99□□□□□ -0.01
PMF1-204ENST00000466489 DUOX2Q9NRD8 1548 aa14.97□□□□□ -0.01
PMF1-204ENST00000466489 EIF2AK4Q9P2K8 1649 aaKnown RBP14.96□□□□□ -0.01
PMF1-204ENST00000466489 ITGAEP38570 1179 aa14.96□□□□□ -0.01
PMF1-204ENST00000466489 ESF1Q9H501 851 aaKnown RBP14.96□□□□□ -0.01
PMF1-204ENST00000466489 DHX29Q7Z478 1369 aaKnown RBP14.96□□□□□ -0.02
PMF1-204ENST00000466489 KIF15Q9NS87 1388 aa14.96□□□□□ -0.02
PMF1-204ENST00000466489 FER1L4A9Z1Z3 1794 aa14.96□□□□□ -0.02
PMF1-204ENST00000466489 ADGRL2O95490 1459 aa14.95□□□□□ -0.02
PMF1-204ENST00000466489 CHIC2Q9UKJ5 165 aa14.95□□□□□ -0.02
PMF1-204ENST00000466489 SIGLEC1Q9BZZ2 1709 aa14.95□□□□□ -0.02
PMF1-204ENST00000466489 ERBINQ96RT1 1412 aa14.93□□□□□ -0.02
PMF1-204ENST00000466489 MLECQ14165 292 aa14.93□□□□□ -0.02
PMF1-204ENST00000466489 ROCK1Q13464 1354 aa14.93□□□□□ -0.02
PMF1-204ENST00000466489 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
PMF1-204ENST00000466489 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
PMF1-204ENST00000466489 RRP7BPQ9NSQ0 103 aa14.92□□□□□ -0.02
PMF1-204ENST00000466489 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
PMF1-204ENST00000466489 RIMS1Q86UR5 1692 aaKnown RBP14.9□□□□□ -0.02
PMF1-204ENST00000466489 KIF3BO15066 747 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms