RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 PLB1Q6P1J6 1458 aa14.64□□□□□ -0.07
UFD1-206ENST00000466373 BCANQ96GW7 911 aa14.64□□□□□ -0.07
UFD1-206ENST00000466373 RAPGEF6Q8TEU7 1601 aa14.64□□□□□ -0.07
UFD1-206ENST00000466373 ABCC5O15440 1437 aa14.63□□□□□ -0.07
UFD1-206ENST00000466373 AKNAQ7Z591 1439 aa14.63□□□□□ -0.07
UFD1-206ENST00000466373 CFDP1Q9UEE9 299 aaPredicted RBP14.62□□□□□ -0.07
UFD1-206ENST00000466373 CCER2I3L3R5 266 aa14.62□□□□□ -0.07
UFD1-206ENST00000466373 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
UFD1-206ENST00000466373 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
UFD1-206ENST00000466373 WASHC2AQ641Q2 1341 aa14.6□□□□□ -0.07
UFD1-206ENST00000466373 CEP170Q5SW79 1584 aa14.6□□□□□ -0.07
UFD1-206ENST00000466373 EIF4G2P78344 907 aaKnown RBP eCLIP14.59□□□□□ -0.07
UFD1-206ENST00000466373 FKBP8Q14318 412 aa14.59□□□□□ -0.07
UFD1-206ENST00000466373 MAGI1Q96QZ7 1491 aaPredicted RBP14.58□□□□□ -0.08
UFD1-206ENST00000466373 SYNJ2O15056 1496 aa14.58□□□□□ -0.08
UFD1-206ENST00000466373 DNMT1P26358 1616 aaKnown RBP14.57□□□□□ -0.08
UFD1-206ENST00000466373 TROQ12816 1431 aaPredicted RBP14.57□□□□□ -0.08
UFD1-206ENST00000466373 ROCK1Q13464 1354 aa14.57□□□□□ -0.08
UFD1-206ENST00000466373 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
UFD1-206ENST00000466373 ANKRD30BQ9BXX2 1392 aa14.56□□□□□ -0.08
UFD1-206ENST00000466373 KIF14Q15058 1648 aa14.55□□□□□ -0.08
UFD1-206ENST00000466373 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
UFD1-206ENST00000466373 CAMSAP2Q08AD1 1489 aa14.54□□□□□ -0.08
UFD1-206ENST00000466373 CARMIL2Q6F5E8 1435 aa14.54□□□□□ -0.08
UFD1-206ENST00000466373 GPATCH8Q9UKJ3 1502 aaKnown RBP14.53□□□□□ -0.08
UFD1-206ENST00000466373 ZNF326Q5BKZ1 582 aaKnown RBP14.52□□□□□ -0.09
UFD1-206ENST00000466373 HNRNPUQ00839 825 aaKnown RBP eCLIP14.51□□□□□ -0.09
UFD1-206ENST00000466373 RPRD2Q5VT52 1461 aaKnown RBP14.51□□□□□ -0.09
UFD1-206ENST00000466373 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
UFD1-206ENST00000466373 NCOA1Q15788 1441 aa14.51□□□□□ -0.09
UFD1-206ENST00000466373 NUP160Q12769 1436 aa14.49□□□□□ -0.09
UFD1-206ENST00000466373 NEFLP07196 543 aa14.49□□□□□ -0.09
UFD1-206ENST00000466373 CNGB1Q14028 1251 aaPredicted RBP14.48□□□□□ -0.09
UFD1-206ENST00000466373 PKD2Q13563 968 aa14.48□□□□□ -0.09
UFD1-206ENST00000466373 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
UFD1-206ENST00000466373 TEX14Q8IWB6 1497 aa14.48□□□□□ -0.09
UFD1-206ENST00000466373 PZPP20742 1482 aa14.47□□□□□ -0.09
UFD1-206ENST00000466373 ITSN2Q9NZM3 1697 aa14.46□□□□□ -0.09
UFD1-206ENST00000466373 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
UFD1-206ENST00000466373 CCDC7Q96M83 1385 aa14.46□□□□□ -0.1
UFD1-206ENST00000466373 TSHZ2Q9NRE2 1034 aa14.45□□□□□ -0.1
UFD1-206ENST00000466373 ANKRD30AQ9BXX3 1397 aa14.45□□□□□ -0.1
UFD1-206ENST00000466373 ATP10BO94823 1461 aa14.44□□□□□ -0.1
UFD1-206ENST00000466373 CNTLNQ9NXG0 1405 aa14.44□□□□□ -0.1
UFD1-206ENST00000466373 HNRNPMP52272 730 aaKnown RBP eCLIP14.44□□□□□ -0.1
UFD1-206ENST00000466373 ANKRD50Q9ULJ7 1429 aa14.43□□□□□ -0.1
UFD1-206ENST00000466373 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
UFD1-206ENST00000466373 FAM9BQ8IZU0 186 aa14.43□□□□□ -0.1
UFD1-206ENST00000466373 PRKRIP1Q9H875 184 aaPredicted RBP14.42□□□□□ -0.1
UFD1-206ENST00000466373 ADCY10Q96PN6 1610 aa14.42□□□□□ -0.1
UFD1-206ENST00000466373 ADGBQ8N7X0 1667 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 NUP155O75694 1391 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 TSPY4P0CV99 314 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 TSPY10P0CW01 314 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 IRX6P78412 446 aaPredicted RBP14.41□□□□□ -0.1
UFD1-206ENST00000466373 CDC42BPAQ5VT25 1732 aa14.4□□□□□ -0.1
UFD1-206ENST00000466373 ABCA8O94911 1581 aa14.4□□□□□ -0.1
UFD1-206ENST00000466373 MRS2Q9HD23 443 aa14.4□□□□□ -0.1
UFD1-206ENST00000466373 ADGRL2O95490 1459 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 C9orf84Q5VXU9 1444 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 CROCC2H7BZ55 1655 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 PTPRGP23470 1445 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 SPATA31E1Q6ZUB1 1445 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
UFD1-206ENST00000466373 KDM2AQ9Y2K7 1162 aa14.38□□□□□ -0.11
UFD1-206ENST00000466373 USP47Q96K76 1375 aa14.36□□□□□ -0.11
UFD1-206ENST00000466373 KIF15Q9NS87 1388 aa14.35□□□□□ -0.11
UFD1-206ENST00000466373 MBD5Q9P267 1494 aa14.32□□□□□ -0.12
UFD1-206ENST00000466373 SENP3-EIF4A1A0A087X0R7 540 aa14.32□□□□□ -0.12
UFD1-206ENST00000466373 DCAF11Q8TEB1 546 aa14.31□□□□□ -0.12
UFD1-206ENST00000466373 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
UFD1-206ENST00000466373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.121e-6■■□□□ 11.7
UFD1-206ENST00000466373 SHANK2Q9UPX8 1470 aa14.3□□□□□ -0.12
UFD1-206ENST00000466373 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
UFD1-206ENST00000466373 RGL3Q3MIN7 710 aa14.28□□□□□ -0.12
UFD1-206ENST00000466373 CHD1O14646 1710 aa14.27□□□□□ -0.12
UFD1-206ENST00000466373 SAMD9LQ8IVG5 1584 aa14.27□□□□□ -0.13
UFD1-206ENST00000466373 ST20-MTHFSA0A0A6YYL1 179 aa14.27□□□□□ -0.13
UFD1-206ENST00000466373 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.13
UFD1-206ENST00000466373 POLR1AO95602 1720 aaPredicted RBP14.26□□□□□ -0.13
UFD1-206ENST00000466373 CCDC141Q6ZP82 1450 aa14.26□□□□□ -0.13
UFD1-206ENST00000466373 DHX29Q7Z478 1369 aaKnown RBP14.25□□□□□ -0.13
UFD1-206ENST00000466373 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
UFD1-206ENST00000466373 KDM5CP41229 1560 aa14.24□□□□□ -0.13
UFD1-206ENST00000466373 ARHGAP5Q13017 1502 aa14.24□□□□□ -0.13
UFD1-206ENST00000466373 SYCP2Q9BX26 1530 aa14.24□□□□□ -0.13
UFD1-206ENST00000466373 ARHGEF5Q12774 1597 aa14.23□□□□□ -0.13
UFD1-206ENST00000466373 ZBED9Q6R2W3 1325 aa14.23□□□□□ -0.13
UFD1-206ENST00000466373 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
UFD1-206ENST00000466373 PREX2Q70Z35 1606 aa14.22□□□□□ -0.13
UFD1-206ENST00000466373 RALGAPBQ86X10 1494 aa14.22□□□□□ -0.13
UFD1-206ENST00000466373 FAM135AQ9P2D6 1515 aa14.22□□□□□ -0.13
UFD1-206ENST00000466373 UHRF1BP1Q6BDS2 1440 aa14.22□□□□□ -0.13
UFD1-206ENST00000466373 RBM19Q9Y4C8 960 aaKnown RBP14.21□□□□□ -0.13
UFD1-206ENST00000466373 ROCK2O75116 1388 aaKnown RBP14.21□□□□□ -0.14
UFD1-206ENST00000466373 KDM5DQ9BY66 1539 aa14.21□□□□□ -0.14
UFD1-206ENST00000466373 RSPH4AQ5TD94 716 aa14.2□□□□□ -0.14
UFD1-206ENST00000466373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.2□□□□□ -0.14
UFD1-206ENST00000466373 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 345.3 ms