RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 DIP2BQ9P265 1576 aa15.84■□□□□ 0.13
ATG3-203ENST00000465980 GALR2O43603 387 aaPredicted RBP15.83■□□□□ 0.12
ATG3-203ENST00000465980 TNIKQ9UKE5 1360 aa15.83■□□□□ 0.12
ATG3-203ENST00000465980 DISP1Q96F81 1524 aa15.83■□□□□ 0.12
ATG3-203ENST00000465980 ABCC10Q5T3U5 1492 aa15.82■□□□□ 0.12
ATG3-203ENST00000465980 FAM69CQ0P6D2 419 aa15.81■□□□□ 0.12
ATG3-203ENST00000465980 KIAA0556O60303 1618 aa15.8■□□□□ 0.12
ATG3-203ENST00000465980 UGGT2Q9NYU1 1516 aa15.8■□□□□ 0.12
ATG3-203ENST00000465980 PHF12Q96QT6 1004 aa15.79■□□□□ 0.12
ATG3-203ENST00000465980 ABCC2Q92887 1545 aa15.77■□□□□ 0.11
ATG3-203ENST00000465980 PRXQ9BXM0 1461 aa15.74■□□□□ 0.11
ATG3-203ENST00000465980 UACAQ9BZF9 1416 aa15.74■□□□□ 0.11
ATG3-203ENST00000465980 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
ATG3-203ENST00000465980 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.11
ATG3-203ENST00000465980 ASXL2Q76L83 1435 aa15.71■□□□□ 0.11
ATG3-203ENST00000465980 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
ATG3-203ENST00000465980 KDM6BO15054 1643 aa15.68■□□□□ 0.1
ATG3-203ENST00000465980 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
ATG3-203ENST00000465980 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
ATG3-203ENST00000465980 KDM5BQ9UGL1 1544 aa15.67■□□□□ 0.1
ATG3-203ENST00000465980 PPRC1Q5VV67 1664 aaKnown RBP15.67■□□□□ 0.1
ATG3-203ENST00000465980 GLI2P10070 1586 aa15.63■□□□□ 0.09
ATG3-203ENST00000465980 ABCA8O94911 1581 aa15.62■□□□□ 0.09
ATG3-203ENST00000465980 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
ATG3-203ENST00000465980 MIER1Q8N108 512 aa15.62■□□□□ 0.09
ATG3-203ENST00000465980 MS4A3Q96HJ5 214 aa15.61■□□□□ 0.09
ATG3-203ENST00000465980 TSPYL2Q9H2G4 693 aaPredicted RBP15.61■□□□□ 0.09
ATG3-203ENST00000465980 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
ATG3-203ENST00000465980 MAP3K4Q9Y6R4 1608 aa15.61■□□□□ 0.09
ATG3-203ENST00000465980 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
ATG3-203ENST00000465980 CCDC61Q9Y6R9 512 aa15.6■□□□□ 0.09
ATG3-203ENST00000465980 EEA1Q15075 1411 aa15.6■□□□□ 0.09
ATG3-203ENST00000465980 WDR7Q9Y4E6 1490 aa15.59■□□□□ 0.09
ATG3-203ENST00000465980 SAMD9Q5K651 1589 aa15.58■□□□□ 0.08
ATG3-203ENST00000465980 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
ATG3-203ENST00000465980 ASTLQ6HA08 431 aaPredicted RBP15.57■□□□□ 0.08
ATG3-203ENST00000465980 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
ATG3-203ENST00000465980 KIF21BO75037 1637 aa15.54■□□□□ 0.08
ATG3-203ENST00000465980 CFAP43Q8NDM7 1665 aa15.52■□□□□ 0.08
ATG3-203ENST00000465980 RAPGEF6Q8TEU7 1601 aa15.52■□□□□ 0.08
ATG3-203ENST00000465980 KCNH8Q96L42 1107 aa15.51■□□□□ 0.07
ATG3-203ENST00000465980 TEX14Q8IWB6 1497 aa15.51■□□□□ 0.07
ATG3-203ENST00000465980 ATMINO43313 823 aaPredicted RBP15.5■□□□□ 0.07
ATG3-203ENST00000465980 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
ATG3-203ENST00000465980 PLCD3Q8N3E9 789 aa15.5■□□□□ 0.07
ATG3-203ENST00000465980 KIF12Q96FN5 646 aa15.5■□□□□ 0.07
ATG3-203ENST00000465980 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
ATG3-203ENST00000465980 FHOD3Q2V2M9 1422 aa15.49■□□□□ 0.07
ATG3-203ENST00000465980 COL17A1Q9UMD9 1497 aaPredicted RBP15.47■□□□□ 0.07
ATG3-203ENST00000465980 FKBP8Q14318 412 aa15.47■□□□□ 0.07
ATG3-203ENST00000465980 RASEFQ8IZ41 740 aa15.47■□□□□ 0.07
ATG3-203ENST00000465980 SLC39A7Q92504 469 aa15.47■□□□□ 0.07
ATG3-203ENST00000465980 ATP10BO94823 1461 aa15.46■□□□□ 0.07
ATG3-203ENST00000465980 CD109Q6YHK3 1445 aa15.46■□□□□ 0.07
ATG3-203ENST00000465980 POTEB2H3BUK9 544 aa15.45■□□□□ 0.06
ATG3-203ENST00000465980 C7P10643 843 aa15.44■□□□□ 0.06
ATG3-203ENST00000465980 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
ATG3-203ENST00000465980 METRNQ9UJH8 293 aa15.43■□□□□ 0.06
ATG3-203ENST00000465980 EFCAB5A4FU69 1503 aa15.43■□□□□ 0.06
ATG3-203ENST00000465980 NUP153P49790 1475 aaKnown RBP15.42■□□□□ 0.06
ATG3-203ENST00000465980 MAGI3Q5TCQ9 1506 aa15.42■□□□□ 0.06
ATG3-203ENST00000465980 ABCA9Q8IUA7 1624 aa15.41■□□□□ 0.06
ATG3-203ENST00000465980 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
ATG3-203ENST00000465980 UBTFP17480 764 aaKnown RBP15.39■□□□□ 0.05
ATG3-203ENST00000465980 MAP3K13O43283 966 aa15.38■□□□□ 0.05
ATG3-203ENST00000465980 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
ATG3-203ENST00000465980 TIE1P35590 1138 aa15.36■□□□□ 0.05
ATG3-203ENST00000465980 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
ATG3-203ENST00000465980 NUBP1P53384 320 aa15.35■□□□□ 0.05
ATG3-203ENST00000465980 CDK13Q14004 1512 aaKnown RBP15.34■□□□□ 0.05
ATG3-203ENST00000465980 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
ATG3-203ENST00000465980 BMP2KQ9NSY1 1161 aaPredicted RBP15.33■□□□□ 0.04
ATG3-203ENST00000465980 ARHGAP35Q9NRY4 1499 aa15.31■□□□□ 0.04
ATG3-203ENST00000465980 TTC37Q6PGP7 1564 aa15.3■□□□□ 0.04
ATG3-203ENST00000465980 HECW1Q76N89 1606 aa15.29■□□□□ 0.04
ATG3-203ENST00000465980 ARAP3Q8WWN8 1544 aa15.29■□□□□ 0.04
ATG3-203ENST00000465980 ATP1B4Q9UN42 357 aaPredicted RBP15.29■□□□□ 0.04
ATG3-203ENST00000465980 TRPC6Q9Y210 931 aa15.29■□□□□ 0.04
ATG3-203ENST00000465980 PLEKHD1A6NEE1 506 aa15.28■□□□□ 0.04
ATG3-203ENST00000465980 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
ATG3-203ENST00000465980 LRRIQ1Q96JM4 1722 aa15.27■□□□□ 0.04
ATG3-203ENST00000465980 MAMSTRQ6ZN01 415 aa15.27■□□□□ 0.04
ATG3-203ENST00000465980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.035e-6■■■■□ 19.7
ATG3-203ENST00000465980 FAM212AQ96EL1 285 aa15.26■□□□□ 0.03
ATG3-203ENST00000465980 FRMPD1Q5SYB0 1578 aa15.26■□□□□ 0.03
ATG3-203ENST00000465980 NEO1Q92859 1461 aa15.26■□□□□ 0.03
ATG3-203ENST00000465980 FMN1Q68DA7 1419 aa15.26■□□□□ 0.03
ATG3-203ENST00000465980 CFAP74Q9C0B2 1584 aa15.24■□□□□ 0.03
ATG3-203ENST00000465980 RAPGEF3O95398 923 aa15.24■□□□□ 0.03
ATG3-203ENST00000465980 RICTORQ6R327 1708 aa15.23■□□□□ 0.03
ATG3-203ENST00000465980 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
ATG3-203ENST00000465980 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
ATG3-203ENST00000465980 POTEJP0CG39 1038 aa15.22■□□□□ 0.03
ATG3-203ENST00000465980 MYO5CQ9NQX4 1742 aa15.22■□□□□ 0.03
ATG3-203ENST00000465980 FANCAO15360 1455 aa15.21■□□□□ 0.03
ATG3-203ENST00000465980 PCF11O94913 1555 aaKnown RBP15.21■□□□□ 0.03
ATG3-203ENST00000465980 TTLL13PA6NNM8 815 aa15.21■□□□□ 0.03
ATG3-203ENST00000465980 KIF14Q15058 1648 aa15.21■□□□□ 0.02
ATG3-203ENST00000465980 AKNAQ7Z591 1439 aa15.18■□□□□ 0.02
ATG3-203ENST00000465980 ARHGEF40Q8TER5 1519 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms