RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 MYO5CQ9NQX4 1742 aa25.87■■□□□ 1.73
EXOSC3-203ENST00000465229 ZNF777Q9ULD5 760 aaPredicted RBP25.86■■□□□ 1.73
EXOSC3-203ENST00000465229 PREX2Q70Z35 1606 aa25.86■■□□□ 1.73
EXOSC3-203ENST00000465229 ARAP3Q8WWN8 1544 aa25.85■■□□□ 1.73
EXOSC3-203ENST00000465229 ZNF644Q9H582 1327 aaPredicted RBP25.85■■□□□ 1.73
EXOSC3-203ENST00000465229 CDC42BPBQ9Y5S2 1711 aa25.85■■□□□ 1.73
EXOSC3-203ENST00000465229 ARHGAP5Q13017 1502 aa25.85■■□□□ 1.73
EXOSC3-203ENST00000465229 ITSN2Q9NZM3 1697 aa25.84■■□□□ 1.73
EXOSC3-203ENST00000465229 RRBP1Q9P2E9 1410 aaKnown RBP25.83■■□□□ 1.73
EXOSC3-203ENST00000465229 FANCAO15360 1455 aa25.81■■□□□ 1.72
EXOSC3-203ENST00000465229 FAM50AQ14320 339 aaKnown RBP25.79■■□□□ 1.72
EXOSC3-203ENST00000465229 TSPOAP1O95153 1857 aa25.76■■□□□ 1.71
EXOSC3-203ENST00000465229 TCOF1Q13428 1488 aaKnown RBP25.76■■□□□ 1.71
EXOSC3-203ENST00000465229 PTPN23Q9H3S7 1636 aa25.76■■□□□ 1.71
EXOSC3-203ENST00000465229 PPRC1Q5VV67 1664 aaKnown RBP25.75■■□□□ 1.71
EXOSC3-203ENST00000465229 AKNAQ7Z591 1439 aa25.75■■□□□ 1.71
EXOSC3-203ENST00000465229 CAMSAP2Q08AD1 1489 aa25.75■■□□□ 1.71
EXOSC3-203ENST00000465229 TEX14Q8IWB6 1497 aa25.74■■□□□ 1.71
EXOSC3-203ENST00000465229 NEO1Q92859 1461 aa25.74■■□□□ 1.71
EXOSC3-203ENST00000465229 SAMD9LQ8IVG5 1584 aa25.74■■□□□ 1.71
EXOSC3-203ENST00000465229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.73■■□□□ 1.71
EXOSC3-203ENST00000465229 HNRNPMP52272 730 aaKnown RBP eCLIP25.73■■□□□ 1.712e-9■□□□□ 10.1
EXOSC3-203ENST00000465229 KIAA1107Q9UPP5 1409 aa25.71■■□□□ 1.71
EXOSC3-203ENST00000465229 PLEKHH2Q8IVE3 1493 aa25.7■■□□□ 1.7
EXOSC3-203ENST00000465229 ARHGEF12Q9NZN5 1544 aa25.69■■□□□ 1.7
EXOSC3-203ENST00000465229 HRCP23327 699 aa25.69■■□□□ 1.7
EXOSC3-203ENST00000465229 ADGRL1O94910 1474 aa25.68■■□□□ 1.7
EXOSC3-203ENST00000465229 SCAPERQ9BY12 1400 aa25.68■■□□□ 1.7
EXOSC3-203ENST00000465229 MBD5Q9P267 1494 aa25.68■■□□□ 1.7
EXOSC3-203ENST00000465229 CFAP74Q9C0B2 1584 aa25.67■■□□□ 1.7
EXOSC3-203ENST00000465229 ABCC1P33527 1531 aa25.66■■□□□ 1.7
EXOSC3-203ENST00000465229 SYCP2Q9BX26 1530 aa25.65■■□□□ 1.7
EXOSC3-203ENST00000465229 RSPH4AQ5TD94 716 aa25.64■■□□□ 1.7
EXOSC3-203ENST00000465229 ITGAEP38570 1179 aa25.63■■□□□ 1.69
EXOSC3-203ENST00000465229 TRAPPC8Q9Y2L5 1435 aa25.62■■□□□ 1.69
EXOSC3-203ENST00000465229 AFAP1Q8N556 730 aa25.62■■□□□ 1.69
EXOSC3-203ENST00000465229 ABCC5O15440 1437 aa25.62■■□□□ 1.69
EXOSC3-203ENST00000465229 RAPGEF3O95398 923 aa25.59■■□□□ 1.69
EXOSC3-203ENST00000465229 DENND4BO75064 1496 aaPredicted RBP25.59■■□□□ 1.69
EXOSC3-203ENST00000465229 DAPK1P53355 1430 aa25.59■■□□□ 1.69
EXOSC3-203ENST00000465229 COL17A1Q9UMD9 1497 aaPredicted RBP25.58■■□□□ 1.69
EXOSC3-203ENST00000465229 ARHGEF5Q12774 1597 aa25.58■■□□□ 1.69
EXOSC3-203ENST00000465229 PTPRKQ15262 1439 aa25.57■■□□□ 1.68
EXOSC3-203ENST00000465229 CCDC141Q6ZP82 1450 aa25.57■■□□□ 1.68
EXOSC3-203ENST00000465229 TSPY4P0CV99 314 aa25.56■■□□□ 1.68
EXOSC3-203ENST00000465229 TSPY10P0CW01 314 aa25.56■■□□□ 1.68
EXOSC3-203ENST00000465229 DNMT1P26358 1616 aaKnown RBP25.56■■□□□ 1.68
EXOSC3-203ENST00000465229 POGZQ7Z3K3 1410 aa25.55■■□□□ 1.68
EXOSC3-203ENST00000465229 CHIC2Q9UKJ5 165 aa25.54■■□□□ 1.68
EXOSC3-203ENST00000465229 ZNF518AQ6AHZ1 1483 aa25.53■■□□□ 1.68
EXOSC3-203ENST00000465229 SPAG9O60271 1321 aaKnown RBP25.5■■□□□ 1.67
EXOSC3-203ENST00000465229 C9orf84Q5VXU9 1444 aa25.48■■□□□ 1.67
EXOSC3-203ENST00000465229 SHANK2Q9UPX8 1470 aa25.47■■□□□ 1.67
EXOSC3-203ENST00000465229 RICTORQ6R327 1708 aa25.46■■□□□ 1.67
EXOSC3-203ENST00000465229 KDM5CP41229 1560 aa25.46■■□□□ 1.67
EXOSC3-203ENST00000465229 FRMPD1Q5SYB0 1578 aa25.46■■□□□ 1.67
EXOSC3-203ENST00000465229 RTEL1-TNFRSF6BF6WH68 1400 aa25.44■■□□□ 1.66
EXOSC3-203ENST00000465229 CROCC2H7BZ55 1655 aa25.44■■□□□ 1.66
EXOSC3-203ENST00000465229 MYT1LQ9UL68 1186 aa25.43■■□□□ 1.66
EXOSC3-203ENST00000465229 MLH3Q9UHC1 1453 aa25.43■■□□□ 1.66
EXOSC3-203ENST00000465229 RRP7BPQ9NSQ0 103 aa25.42■■□□□ 1.66
EXOSC3-203ENST00000465229 ROCK1Q13464 1354 aa25.42■■□□□ 1.66
EXOSC3-203ENST00000465229 NCOA1Q15788 1441 aa25.42■■□□□ 1.66
EXOSC3-203ENST00000465229 MAST1Q9Y2H9 1570 aa25.42■■□□□ 1.66
EXOSC3-203ENST00000465229 KDM6BO15054 1643 aa25.42■■□□□ 1.66
EXOSC3-203ENST00000465229 ADGRL2O95490 1459 aa25.41■■□□□ 1.66
EXOSC3-203ENST00000465229 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
EXOSC3-203ENST00000465229 ZMYM4Q5VZL5 1548 aa25.39■■□□□ 1.65
EXOSC3-203ENST00000465229 ZFYVE16Q7Z3T8 1539 aa25.39■■□□□ 1.65
EXOSC3-203ENST00000465229 ATP7AQ04656 1500 aa25.38■■□□□ 1.65
EXOSC3-203ENST00000465229 INO80Q9ULG1 1556 aaPredicted RBP25.37■■□□□ 1.65
EXOSC3-203ENST00000465229 MAGI2Q86UL8 1455 aa25.36■■□□□ 1.65
EXOSC3-203ENST00000465229 KIDINS220Q9ULH0 1771 aa25.36■■□□□ 1.65
EXOSC3-203ENST00000465229 HECW2Q9P2P5 1572 aa25.36■■□□□ 1.65
EXOSC3-203ENST00000465229 YEATS2Q9ULM3 1422 aa25.35■■□□□ 1.65
EXOSC3-203ENST00000465229 KIF15Q9NS87 1388 aa25.34■■□□□ 1.65
EXOSC3-203ENST00000465229 HFM1A2PYH4 1435 aa25.33■■□□□ 1.65
EXOSC3-203ENST00000465229 NAIPQ13075 1403 aa25.32■■□□□ 1.64
EXOSC3-203ENST00000465229 ADGBQ8N7X0 1667 aa25.32■■□□□ 1.64
EXOSC3-203ENST00000465229 PLXNC1O60486 1568 aa25.31■■□□□ 1.64
EXOSC3-203ENST00000465229 SETD5Q9C0A6 1442 aa25.27■■□□□ 1.64
EXOSC3-203ENST00000465229 DHX29Q7Z478 1369 aaKnown RBP25.27■■□□□ 1.64
EXOSC3-203ENST00000465229 ABCA6Q8N139 1617 aa25.27■■□□□ 1.64
EXOSC3-203ENST00000465229 ZEB1P37275 1124 aaPredicted RBP25.26■■□□□ 1.63
EXOSC3-203ENST00000465229 DIP2CQ9Y2E4 1556 aa25.26■■□□□ 1.63
EXOSC3-203ENST00000465229 ATP10AO60312 1499 aa25.26■■□□□ 1.63
EXOSC3-203ENST00000465229 ANKRD50Q9ULJ7 1429 aa25.25■■□□□ 1.63
EXOSC3-203ENST00000465229 DUOX2Q9NRD8 1548 aa25.25■■□□□ 1.63
EXOSC3-203ENST00000465229 A2MP01023 1474 aa25.24■■□□□ 1.63
EXOSC3-203ENST00000465229 ARHGEF40Q8TER5 1519 aa25.22■■□□□ 1.63
EXOSC3-203ENST00000465229 RAB3GAP2Q9H2M9 1393 aa25.21■■□□□ 1.63
EXOSC3-203ENST00000465229 ERBINQ96RT1 1412 aa25.2■■□□□ 1.62
EXOSC3-203ENST00000465229 GCC2Q8IWJ2 1684 aa25.19■■□□□ 1.62
EXOSC3-203ENST00000465229 KIF3BO15066 747 aa25.16■■□□□ 1.62
EXOSC3-203ENST00000465229 REREQ9P2R6 1566 aa25.14■■□□□ 1.62
EXOSC3-203ENST00000465229 AGLP35573 1532 aa25.09■■□□□ 1.61
EXOSC3-203ENST00000465229 ARID4BQ4LE39 1312 aaPredicted RBP25.07■■□□□ 1.6
EXOSC3-203ENST00000465229 SIGLEC1Q9BZZ2 1709 aa25.07■■□□□ 1.6
EXOSC3-203ENST00000465229 GGT6Q6P531 493 aa25.07■■□□□ 1.6
EXOSC3-203ENST00000465229 TRIM52Q96A61 297 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms