RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-225ENST00000465158 SOGA1O94964 1423 aa10.9□□□□□ -0.66
RBM39-225ENST00000465158 ABCA10Q8WWZ4 1543 aa10.89□□□□□ -0.67
RBM39-225ENST00000465158 PYGBP11216 843 aa10.88□□□□□ -0.67
RBM39-225ENST00000465158 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
RBM39-225ENST00000465158 IRX5P78411 483 aaPredicted RBP10.86□□□□□ -0.67
RBM39-225ENST00000465158 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
RBM39-225ENST00000465158 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
RBM39-225ENST00000465158 CUX2O14529 1486 aa10.83□□□□□ -0.68
RBM39-225ENST00000465158 CDAN1Q8IWY9 1227 aa10.83□□□□□ -0.68
RBM39-225ENST00000465158 IFNLR1Q8IU57 520 aaPredicted RBP10.82□□□□□ -0.68
RBM39-225ENST00000465158 OCEL1Q9H607 264 aa10.82□□□□□ -0.68
RBM39-225ENST00000465158 ST18O60284 1047 aa10.81□□□□□ -0.68
RBM39-225ENST00000465158 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
RBM39-225ENST00000465158 ERICH3Q5RHP9 1530 aa10.8□□□□□ -0.68
RBM39-225ENST00000465158 CUL7Q14999 1698 aa10.8□□□□□ -0.68
RBM39-225ENST00000465158 RAD54L2Q9Y4B4 1467 aa10.8□□□□□ -0.68
RBM39-225ENST00000465158 KIF21BO75037 1637 aa10.8□□□□□ -0.68
RBM39-225ENST00000465158 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
RBM39-225ENST00000465158 GAPVD1Q14C86 1478 aa10.79□□□□□ -0.68
RBM39-225ENST00000465158 FAM9AQ8IZU1 332 aaPredicted RBP10.78□□□□□ -0.68
RBM39-225ENST00000465158 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
RBM39-225ENST00000465158 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
RBM39-225ENST00000465158 GOLGA3Q08378 1498 aa10.75□□□□□ -0.69
RBM39-225ENST00000465158 GRIN2BQ13224 1484 aa10.75□□□□□ -0.69
RBM39-225ENST00000465158 RUSC2Q8N2Y8 1516 aa10.75□□□□□ -0.69
RBM39-225ENST00000465158 GSE1Q14687 1217 aa10.75□□□□□ -0.69
RBM39-225ENST00000465158 IGF1RP08069 1367 aa10.75□□□□□ -0.69
RBM39-225ENST00000465158 PRXQ9BXM0 1461 aa10.74□□□□□ -0.69
RBM39-225ENST00000465158 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
RBM39-225ENST00000465158 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
RBM39-225ENST00000465158 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
RBM39-225ENST00000465158 SNPHO15079 494 aa10.72□□□□□ -0.69
RBM39-225ENST00000465158 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
RBM39-225ENST00000465158 RAPGEF2Q9Y4G8 1499 aa10.72□□□□□ -0.69
RBM39-225ENST00000465158 EIF4G3O43432 1585 aaKnown RBP10.72□□□□□ -0.69
RBM39-225ENST00000465158 GOLGA2Q08379 1002 aa10.71□□□□□ -0.69
RBM39-225ENST00000465158 MAGI1Q96QZ7 1491 aaPredicted RBP10.71□□□□□ -0.69
RBM39-225ENST00000465158 TMEM121BQ9BXQ6 578 aaPredicted RBP10.7□□□□□ -0.7
RBM39-225ENST00000465158 FHAD1B1AJZ9 1412 aa10.69□□□□□ -0.7
RBM39-225ENST00000465158 TNIKQ9UKE5 1360 aa10.69□□□□□ -0.7
RBM39-225ENST00000465158 UBTFP17480 764 aaKnown RBP10.69□□□□□ -0.7
RBM39-225ENST00000465158 MKRN3Q13064 507 aaKnown RBP10.69□□□□□ -0.7
RBM39-225ENST00000465158 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.72e-12■■■■□ 24.4
RBM39-225ENST00000465158 PDCD7Q8N8D1 485 aaKnown RBP10.67□□□□□ -0.7
RBM39-225ENST00000465158 ZNF608Q9ULD9 1512 aaPredicted RBP10.67□□□□□ -0.7
RBM39-225ENST00000465158 ADAMTS12P58397 1594 aa10.65□□□□□ -0.7
RBM39-225ENST00000465158 LOC105371045A0A1W2PR82 267 aa10.65□□□□□ -0.7
RBM39-225ENST00000465158 CHRM1P11229 460 aaPredicted RBP10.65□□□□□ -0.7
RBM39-225ENST00000465158 C3orf67Q6ZVT6 689 aa10.65□□□□□ -0.7
RBM39-225ENST00000465158 CTTNBP2Q8WZ74 1663 aa10.64□□□□□ -0.71
RBM39-225ENST00000465158 L3MBTL3Q96JM7 780 aaPredicted RBP10.64□□□□□ -0.71
RBM39-225ENST00000465158 SYNJ2O15056 1496 aa10.63□□□□□ -0.71
RBM39-225ENST00000465158 PSEN1P49768 467 aa10.63□□□□□ -0.71
RBM39-225ENST00000465158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.714e-38■■■□□ 19.2
RBM39-225ENST00000465158 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
RBM39-225ENST00000465158 CHMP7Q8WUX9 453 aaPredicted RBP10.61□□□□□ -0.71
RBM39-225ENST00000465158 MARVELD3Q96A59 401 aa10.61□□□□□ -0.71
RBM39-225ENST00000465158 CIZ1Q9ULV3 898 aaPredicted RBP10.59□□□□□ -0.71
RBM39-225ENST00000465158 GRIN2AQ12879 1464 aa10.58□□□□□ -0.72
RBM39-225ENST00000465158 PDAP1Q13442 181 aaKnown RBP10.57□□□□□ -0.72
RBM39-225ENST00000465158 CEP162Q5TB80 1403 aa10.57□□□□□ -0.72
RBM39-225ENST00000465158 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
RBM39-225ENST00000465158 EFCAB5A4FU69 1503 aa10.55□□□□□ -0.72
RBM39-225ENST00000465158 KIAA0586Q9BVV6 1533 aa10.55□□□□□ -0.72
RBM39-225ENST00000465158 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
RBM39-225ENST00000465158 CLIP1P30622 1438 aa10.55□□□□□ -0.72
RBM39-225ENST00000465158 EMP3P54852 163 aa10.54□□□□□ -0.72
RBM39-225ENST00000465158 IQGAP2Q13576 1575 aa10.54□□□□□ -0.72
RBM39-225ENST00000465158 CHD1O14646 1710 aa10.53□□□□□ -0.72
RBM39-225ENST00000465158 ILDR1Q86SU0 546 aaPredicted RBP10.52□□□□□ -0.73
RBM39-225ENST00000465158 NUP160Q12769 1436 aa10.51□□□□□ -0.73
RBM39-225ENST00000465158 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
RBM39-225ENST00000465158 G3V3G9 751 aa10.5□□□□□ -0.73
RBM39-225ENST00000465158 DPY19L2Q6NUT2 758 aa10.5□□□□□ -0.73
RBM39-225ENST00000465158 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
RBM39-225ENST00000465158 CARMIL2Q6F5E8 1435 aa10.48□□□□□ -0.73
RBM39-225ENST00000465158 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
RBM39-225ENST00000465158 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
RBM39-225ENST00000465158 SAMD9Q5K651 1589 aa10.47□□□□□ -0.73
RBM39-225ENST00000465158 FAM205CA6NFA0 338 aa10.46□□□□□ -0.73
RBM39-225ENST00000465158 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
RBM39-225ENST00000465158 FMN1Q68DA7 1419 aa10.46□□□□□ -0.74
RBM39-225ENST00000465158 ARHGAP35Q9NRY4 1499 aa10.44□□□□□ -0.74
RBM39-225ENST00000465158 VPS8Q8N3P4 1428 aa10.44□□□□□ -0.74
RBM39-225ENST00000465158 JPH4Q96JJ6 628 aa10.43□□□□□ -0.74
RBM39-225ENST00000465158 POTEB3A0JP26 581 aa10.42□□□□□ -0.74
RBM39-225ENST00000465158 POTEBQ6S5H4 581 aa10.42□□□□□ -0.74
RBM39-225ENST00000465158 SHROOM2Q13796 1616 aa10.42□□□□□ -0.74
RBM39-225ENST00000465158 RANGAP1P46060 587 aaPredicted RBP10.41□□□□□ -0.74
RBM39-225ENST00000465158 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
RBM39-225ENST00000465158 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
RBM39-225ENST00000465158 KIAA0556O60303 1618 aa10.4□□□□□ -0.75
RBM39-225ENST00000465158 CLASP1Q7Z460 1538 aa10.39□□□□□ -0.75
RBM39-225ENST00000465158 ARAP1Q96P48 1450 aa10.39□□□□□ -0.75
RBM39-225ENST00000465158 MAP3K1Q13233 1512 aa10.38□□□□□ -0.75
RBM39-225ENST00000465158 FYCO1Q9BQS8 1478 aa10.38□□□□□ -0.75
RBM39-225ENST00000465158 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
RBM39-225ENST00000465158 ZNF710Q8N1W2 664 aa10.38□□□□□ -0.75
RBM39-225ENST00000465158 DISP1Q96F81 1524 aa10.37□□□□□ -0.75
RBM39-225ENST00000465158 CASKIN1Q8WXD9 1431 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms