RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-225ENST00000465158 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
RBM39-225ENST00000465158 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
RBM39-225ENST00000465158 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
RBM39-225ENST00000465158 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
RBM39-225ENST00000465158 FOXD1Q16676 465 aa18.68■□□□□ 0.58
RBM39-225ENST00000465158 MSH5O43196 834 aa17.6■□□□□ 0.41
RBM39-225ENST00000465158 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
RBM39-225ENST00000465158 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
RBM39-225ENST00000465158 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
RBM39-225ENST00000465158 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
RBM39-225ENST00000465158 ADRA2BP18089 450 aa17.24■□□□□ 0.35
RBM39-225ENST00000465158 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
RBM39-225ENST00000465158 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
RBM39-225ENST00000465158 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
RBM39-225ENST00000465158 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
RBM39-225ENST00000465158 NISCHQ9Y2I1 1504 aa15.31■□□□□ 0.04
RBM39-225ENST00000465158 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
RBM39-225ENST00000465158 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
RBM39-225ENST00000465158 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
RBM39-225ENST00000465158 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
RBM39-225ENST00000465158 RNF216Q9NWF9 866 aaPredicted RBP15.02■□□□□ -0
RBM39-225ENST00000465158 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
RBM39-225ENST00000465158 C1QBPQ07021 282 aaKnown RBP14.76□□□□□ -0.05
RBM39-225ENST00000465158 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.05
RBM39-225ENST00000465158 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
RBM39-225ENST00000465158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.093e-12■□□□□ 9.6
RBM39-225ENST00000465158 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
RBM39-225ENST00000465158 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
RBM39-225ENST00000465158 KCNA4P22459 653 aa14.1□□□□□ -0.15
RBM39-225ENST00000465158 CAPN15O75808 1086 aa14.01□□□□□ -0.17
RBM39-225ENST00000465158 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
RBM39-225ENST00000465158 DSG3P32926 999 aa13.95□□□□□ -0.18
RBM39-225ENST00000465158 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
RBM39-225ENST00000465158 APLP2Q06481 763 aa13.77□□□□□ -0.21
RBM39-225ENST00000465158 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
RBM39-225ENST00000465158 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
RBM39-225ENST00000465158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
RBM39-225ENST00000465158 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
RBM39-225ENST00000465158 POTEHQ6S545 545 aa13.69□□□□□ -0.22
RBM39-225ENST00000465158 ABCB7O75027 752 aa13.66□□□□□ -0.22
RBM39-225ENST00000465158 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
RBM39-225ENST00000465158 CCDC180Q9P1Z9 1646 aa13.55□□□□□ -0.24
RBM39-225ENST00000465158 MYCNP04198 464 aaPredicted RBP13.41□□□□□ -0.26
RBM39-225ENST00000465158 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
RBM39-225ENST00000465158 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
RBM39-225ENST00000465158 POLA2Q14181 598 aa13.31□□□□□ -0.28
RBM39-225ENST00000465158 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
RBM39-225ENST00000465158 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
RBM39-225ENST00000465158 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
RBM39-225ENST00000465158 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
RBM39-225ENST00000465158 ZBTB22O15209 634 aa12.98□□□□□ -0.33
RBM39-225ENST00000465158 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
RBM39-225ENST00000465158 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
RBM39-225ENST00000465158 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
RBM39-225ENST00000465158 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
RBM39-225ENST00000465158 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
RBM39-225ENST00000465158 DCAF1Q9Y4B6 1507 aa12.77□□□□□ -0.37
RBM39-225ENST00000465158 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
RBM39-225ENST00000465158 SP7Q8TDD2 431 aaPredicted RBP12.74□□□□□ -0.37
RBM39-225ENST00000465158 ABCC9O60706 1549 aa12.72□□□□□ -0.37
RBM39-225ENST00000465158 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
RBM39-225ENST00000465158 MYO15BQ96JP2 1530 aa12.71□□□□□ -0.38
RBM39-225ENST00000465158 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
RBM39-225ENST00000465158 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
RBM39-225ENST00000465158 NACADO15069 1562 aa12.64□□□□□ -0.39
RBM39-225ENST00000465158 FBLN2P98095 1184 aa12.63□□□□□ -0.39
RBM39-225ENST00000465158 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
RBM39-225ENST00000465158 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
RBM39-225ENST00000465158 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
RBM39-225ENST00000465158 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
RBM39-225ENST00000465158 HAX1O00165 279 aa12.6□□□□□ -0.39
RBM39-225ENST00000465158 DCAF8L2P0C7V8 631 aa12.6□□□□□ -0.39
RBM39-225ENST00000465158 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
RBM39-225ENST00000465158 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
RBM39-225ENST00000465158 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
RBM39-225ENST00000465158 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
RBM39-225ENST00000465158 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
RBM39-225ENST00000465158 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
RBM39-225ENST00000465158 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
RBM39-225ENST00000465158 EVX2Q03828 476 aa12.39□□□□□ -0.43
RBM39-225ENST00000465158 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
RBM39-225ENST00000465158 SCRIBQ14160 1630 aa12.25□□□□□ -0.45
RBM39-225ENST00000465158 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.452e-8■□□□□ 10.4
RBM39-225ENST00000465158 CHADLQ6NUI6 762 aa12.22□□□□□ -0.45
RBM39-225ENST00000465158 UNC13AQ9UPW8 1703 aa12.22□□□□□ -0.45
RBM39-225ENST00000465158 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
RBM39-225ENST00000465158 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
RBM39-225ENST00000465158 GABBR2O75899 941 aa12.13□□□□□ -0.47
RBM39-225ENST00000465158 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
RBM39-225ENST00000465158 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
RBM39-225ENST00000465158 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
RBM39-225ENST00000465158 LHX8Q68G74 356 aa11.95□□□□□ -0.5
RBM39-225ENST00000465158 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
RBM39-225ENST00000465158 CLCN6P51797 869 aa11.88□□□□□ -0.51
RBM39-225ENST00000465158 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
RBM39-225ENST00000465158 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
RBM39-225ENST00000465158 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
RBM39-225ENST00000465158 SMARCA4P51532 1647 aa11.8□□□□□ -0.52
RBM39-225ENST00000465158 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
RBM39-225ENST00000465158 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms