RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 TTC37Q6PGP7 1564 aa16.83■□□□□ 0.28
TRAPPC3-205ENST00000462715 TSPOAP1O95153 1857 aa16.82■□□□□ 0.28
TRAPPC3-205ENST00000462715 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
TRAPPC3-205ENST00000462715 ERICH6Q7L0X2 663 aa16.81■□□□□ 0.28
TRAPPC3-205ENST00000462715 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC3-205ENST00000462715 SUPT6HQ7KZ85 1726 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-205ENST00000462715 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-205ENST00000462715 MYO5CQ9NQX4 1742 aa16.78■□□□□ 0.28
TRAPPC3-205ENST00000462715 KANK4Q5T7N3 995 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC3-205ENST00000462715 PLCH2O75038 1416 aa16.76■□□□□ 0.27
TRAPPC3-205ENST00000462715 ARAP3Q8WWN8 1544 aa16.76■□□□□ 0.27
TRAPPC3-205ENST00000462715 CCNB3Q8WWL7 1395 aa16.75■□□□□ 0.27
TRAPPC3-205ENST00000462715 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
TRAPPC3-205ENST00000462715 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
TRAPPC3-205ENST00000462715 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
TRAPPC3-205ENST00000462715 NEO1Q92859 1461 aa16.73■□□□□ 0.27
TRAPPC3-205ENST00000462715 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
TRAPPC3-205ENST00000462715 FANCAO15360 1455 aa16.72■□□□□ 0.27
TRAPPC3-205ENST00000462715 ARHGAP5Q13017 1502 aa16.72■□□□□ 0.27
TRAPPC3-205ENST00000462715 PRKCSHP14314 528 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC3-205ENST00000462715 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.27
TRAPPC3-205ENST00000462715 GPATCH8Q9UKJ3 1502 aaKnown RBP16.71■□□□□ 0.27
TRAPPC3-205ENST00000462715 EFCAB2Q5VUJ9 269 aa16.71■□□□□ 0.27
TRAPPC3-205ENST00000462715 ITSN2Q9NZM3 1697 aa16.71■□□□□ 0.27
TRAPPC3-205ENST00000462715 CDC42BPBQ9Y5S2 1711 aa16.69■□□□□ 0.26
TRAPPC3-205ENST00000462715 CFDP1Q9UEE9 299 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-205ENST00000462715 AKNAQ7Z591 1439 aa16.67■□□□□ 0.26
TRAPPC3-205ENST00000462715 KDM6BO15054 1643 aa16.67■□□□□ 0.26
TRAPPC3-205ENST00000462715 MYOM3Q5VTT5 1437 aa16.64■□□□□ 0.25
TRAPPC3-205ENST00000462715 ADGRL1O94910 1474 aa16.64■□□□□ 0.25
TRAPPC3-205ENST00000462715 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
TRAPPC3-205ENST00000462715 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-205ENST00000462715 PLEKHH2Q8IVE3 1493 aa16.62■□□□□ 0.25
TRAPPC3-205ENST00000462715 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
TRAPPC3-205ENST00000462715 DENND4BO75064 1496 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-205ENST00000462715 SCAPERQ9BY12 1400 aa16.61■□□□□ 0.25
TRAPPC3-205ENST00000462715 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
TRAPPC3-205ENST00000462715 ABCC1P33527 1531 aa16.6■□□□□ 0.25
TRAPPC3-205ENST00000462715 SUPT16HQ9Y5B9 1047 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-205ENST00000462715 COL17A1Q9UMD9 1497 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-205ENST00000462715 KIAA1107Q9UPP5 1409 aa16.58■□□□□ 0.24
TRAPPC3-205ENST00000462715 CAMSAP2Q08AD1 1489 aa16.57■□□□□ 0.24
TRAPPC3-205ENST00000462715 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
TRAPPC3-205ENST00000462715 POGZQ7Z3K3 1410 aa16.57■□□□□ 0.24
TRAPPC3-205ENST00000462715 ZNF518AQ6AHZ1 1483 aa16.56■□□□□ 0.24
TRAPPC3-205ENST00000462715 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
TRAPPC3-205ENST00000462715 RAPGEF3O95398 923 aa16.56■□□□□ 0.24
TRAPPC3-205ENST00000462715 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
TRAPPC3-205ENST00000462715 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC3-205ENST00000462715 MIER1Q8N108 512 aa16.55■□□□□ 0.24
TRAPPC3-205ENST00000462715 YTHDC1Q96MU7 727 aaKnown RBP16.54■□□□□ 0.24
TRAPPC3-205ENST00000462715 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
TRAPPC3-205ENST00000462715 PTPN23Q9H3S7 1636 aa16.54■□□□□ 0.24
TRAPPC3-205ENST00000462715 ARHGEF12Q9NZN5 1544 aa16.54■□□□□ 0.24
TRAPPC3-205ENST00000462715 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRAPPC3-205ENST00000462715 ZMYM4Q5VZL5 1548 aa16.52■□□□□ 0.24
TRAPPC3-205ENST00000462715 TRAPPC8Q9Y2L5 1435 aa16.51■□□□□ 0.23
TRAPPC3-205ENST00000462715 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-205ENST00000462715 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
TRAPPC3-205ENST00000462715 KDM5CP41229 1560 aa16.51■□□□□ 0.23
TRAPPC3-205ENST00000462715 MBD5Q9P267 1494 aa16.5■□□□□ 0.23
TRAPPC3-205ENST00000462715 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
TRAPPC3-205ENST00000462715 MAGI2Q86UL8 1455 aa16.5■□□□□ 0.23
TRAPPC3-205ENST00000462715 ARHGEF5Q12774 1597 aa16.5■□□□□ 0.23
TRAPPC3-205ENST00000462715 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
TRAPPC3-205ENST00000462715 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
TRAPPC3-205ENST00000462715 HECW2Q9P2P5 1572 aa16.48■□□□□ 0.23
TRAPPC3-205ENST00000462715 FAM50AQ14320 339 aaKnown RBP16.47■□□□□ 0.23
TRAPPC3-205ENST00000462715 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
TRAPPC3-205ENST00000462715 SPAG9O60271 1321 aaKnown RBP16.46■□□□□ 0.23
TRAPPC3-205ENST00000462715 ZFYVE16Q7Z3T8 1539 aa16.46■□□□□ 0.23
TRAPPC3-205ENST00000462715 TSPY4P0CV99 314 aa16.45■□□□□ 0.22
TRAPPC3-205ENST00000462715 TSPY10P0CW01 314 aa16.45■□□□□ 0.22
TRAPPC3-205ENST00000462715 ARHGEF40Q8TER5 1519 aa16.44■□□□□ 0.22
TRAPPC3-205ENST00000462715 RRBP1Q9P2E9 1410 aaKnown RBP16.44■□□□□ 0.22
TRAPPC3-205ENST00000462715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAPPC3-205ENST00000462715 DNMT1P26358 1616 aaKnown RBP16.43■□□□□ 0.22
TRAPPC3-205ENST00000462715 ATP7AQ04656 1500 aa16.43■□□□□ 0.22
TRAPPC3-205ENST00000462715 INO80Q9ULG1 1556 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC3-205ENST00000462715 RTEL1-TNFRSF6BF6WH68 1400 aa16.42■□□□□ 0.22
TRAPPC3-205ENST00000462715 DAPK1P53355 1430 aa16.41■□□□□ 0.22
TRAPPC3-205ENST00000462715 YEATS2Q9ULM3 1422 aa16.41■□□□□ 0.22
TRAPPC3-205ENST00000462715 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
TRAPPC3-205ENST00000462715 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
TRAPPC3-205ENST00000462715 CROCC2H7BZ55 1655 aa16.4■□□□□ 0.22
TRAPPC3-205ENST00000462715 ABCC5O15440 1437 aa16.4■□□□□ 0.22
TRAPPC3-205ENST00000462715 MAST1Q9Y2H9 1570 aa16.4■□□□□ 0.22
TRAPPC3-205ENST00000462715 C9orf84Q5VXU9 1444 aa16.4■□□□□ 0.22
TRAPPC3-205ENST00000462715 ATP10AO60312 1499 aa16.39■□□□□ 0.21
TRAPPC3-205ENST00000462715 DIP2CQ9Y2E4 1556 aa16.39■□□□□ 0.21
TRAPPC3-205ENST00000462715 ABCA6Q8N139 1617 aa16.38■□□□□ 0.21
TRAPPC3-205ENST00000462715 REREQ9P2R6 1566 aa16.35■□□□□ 0.21
TRAPPC3-205ENST00000462715 ADGBQ8N7X0 1667 aa16.34■□□□□ 0.21
TRAPPC3-205ENST00000462715 PLXNC1O60486 1568 aa16.34■□□□□ 0.21
TRAPPC3-205ENST00000462715 ANKRD30AQ9BXX3 1397 aa16.33■□□□□ 0.2
TRAPPC3-205ENST00000462715 A2MP01023 1474 aa16.33■□□□□ 0.2
TRAPPC3-205ENST00000462715 ITGAEP38570 1179 aa16.32■□□□□ 0.2
TRAPPC3-205ENST00000462715 ARID4BQ4LE39 1312 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-205ENST00000462715 ADGRL2O95490 1459 aa16.32■□□□□ 0.2
TRAPPC3-205ENST00000462715 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms