RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
TRAPPC3-205ENST00000462715 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
TRAPPC3-205ENST00000462715 ABCC9O60706 1549 aa21.95■■□□□ 1.1
TRAPPC3-205ENST00000462715 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
TRAPPC3-205ENST00000462715 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
TRAPPC3-205ENST00000462715 NACADO15069 1562 aa21.29■■□□□ 1
TRAPPC3-205ENST00000462715 RB1CC1Q8TDY2 1594 aa21.26■□□□□ 0.99
TRAPPC3-205ENST00000462715 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
TRAPPC3-205ENST00000462715 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
TRAPPC3-205ENST00000462715 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
TRAPPC3-205ENST00000462715 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
TRAPPC3-205ENST00000462715 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
TRAPPC3-205ENST00000462715 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
TRAPPC3-205ENST00000462715 SHROOM4Q9ULL8 1493 aa20.44■□□□□ 0.86
TRAPPC3-205ENST00000462715 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
TRAPPC3-205ENST00000462715 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
TRAPPC3-205ENST00000462715 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
TRAPPC3-205ENST00000462715 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC3-205ENST00000462715 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
TRAPPC3-205ENST00000462715 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
TRAPPC3-205ENST00000462715 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
TRAPPC3-205ENST00000462715 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
TRAPPC3-205ENST00000462715 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
TRAPPC3-205ENST00000462715 PEG3Q9GZU2 1588 aa19.65■□□□□ 0.74
TRAPPC3-205ENST00000462715 NCAPD3P42695 1498 aa19.62■□□□□ 0.73
TRAPPC3-205ENST00000462715 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC3-205ENST00000462715 HMGXB3Q12766 1538 aa19.57■□□□□ 0.72
TRAPPC3-205ENST00000462715 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
TRAPPC3-205ENST00000462715 WIZO95785 1651 aa19.54■□□□□ 0.72
TRAPPC3-205ENST00000462715 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-205ENST00000462715 TOP2AP11388 1531 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-205ENST00000462715 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-205ENST00000462715 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
TRAPPC3-205ENST00000462715 HRCP23327 699 aa19.12■□□□□ 0.65
TRAPPC3-205ENST00000462715 LAMC3Q9Y6N6 1575 aa19.09■□□□□ 0.65
TRAPPC3-205ENST00000462715 CADPSQ9ULU8 1353 aa19.07■□□□□ 0.64
TRAPPC3-205ENST00000462715 NESP48681 1621 aa19.05■□□□□ 0.64
TRAPPC3-205ENST00000462715 MYT1Q01538 1121 aa19.03■□□□□ 0.64
TRAPPC3-205ENST00000462715 CFTRP13569 1480 aa19.01■□□□□ 0.63
TRAPPC3-205ENST00000462715 PDS5BQ9NTI5 1447 aa18.96■□□□□ 0.63
TRAPPC3-205ENST00000462715 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
TRAPPC3-205ENST00000462715 PRDM2Q13029 1718 aa18.89■□□□□ 0.62
TRAPPC3-205ENST00000462715 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
TRAPPC3-205ENST00000462715 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
TRAPPC3-205ENST00000462715 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
TRAPPC3-205ENST00000462715 MRC2Q9UBG0 1479 aa18.74■□□□□ 0.59
TRAPPC3-205ENST00000462715 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-205ENST00000462715 WDR62O43379 1518 aa18.66■□□□□ 0.58
TRAPPC3-205ENST00000462715 CUX2O14529 1486 aa18.66■□□□□ 0.58
TRAPPC3-205ENST00000462715 URB2Q14146 1524 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-205ENST00000462715 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
TRAPPC3-205ENST00000462715 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
TRAPPC3-205ENST00000462715 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
TRAPPC3-205ENST00000462715 CUX1P39880 1505 aa18.51■□□□□ 0.55
TRAPPC3-205ENST00000462715 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
TRAPPC3-205ENST00000462715 TOP2BQ02880 1626 aa18.44■□□□□ 0.54
TRAPPC3-205ENST00000462715 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC3-205ENST00000462715 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
TRAPPC3-205ENST00000462715 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
TRAPPC3-205ENST00000462715 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
TRAPPC3-205ENST00000462715 IFT140Q96RY7 1462 aa18.42■□□□□ 0.54
TRAPPC3-205ENST00000462715 SOGA1O94964 1423 aa18.37■□□□□ 0.53
TRAPPC3-205ENST00000462715 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-205ENST00000462715 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
TRAPPC3-205ENST00000462715 ZNF608Q9ULD9 1512 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-205ENST00000462715 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
TRAPPC3-205ENST00000462715 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
TRAPPC3-205ENST00000462715 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
TRAPPC3-205ENST00000462715 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-205ENST00000462715 PPARGC1BQ86YN6 1023 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-205ENST00000462715 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-205ENST00000462715 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.51
TRAPPC3-205ENST00000462715 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.515e-8■■■■■ 40.7
TRAPPC3-205ENST00000462715 GAPVD1Q14C86 1478 aa18.17■□□□□ 0.5
TRAPPC3-205ENST00000462715 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
TRAPPC3-205ENST00000462715 GRIN2BQ13224 1484 aa18.14■□□□□ 0.49
TRAPPC3-205ENST00000462715 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
TRAPPC3-205ENST00000462715 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-205ENST00000462715 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-205ENST00000462715 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
TRAPPC3-205ENST00000462715 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
TRAPPC3-205ENST00000462715 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.49
TRAPPC3-205ENST00000462715 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-205ENST00000462715 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
TRAPPC3-205ENST00000462715 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
TRAPPC3-205ENST00000462715 SYNJ2O15056 1496 aa17.99■□□□□ 0.47
TRAPPC3-205ENST00000462715 ADAMTS12P58397 1594 aa17.98■□□□□ 0.47
TRAPPC3-205ENST00000462715 IGF1RP08069 1367 aa17.97■□□□□ 0.47
TRAPPC3-205ENST00000462715 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
TRAPPC3-205ENST00000462715 FBLN2P98095 1184 aa17.97■□□□□ 0.47
TRAPPC3-205ENST00000462715 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-205ENST00000462715 CUL7Q14999 1698 aa17.96■□□□□ 0.47
TRAPPC3-205ENST00000462715 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
TRAPPC3-205ENST00000462715 CHD1O14646 1710 aa17.95■□□□□ 0.46
TRAPPC3-205ENST00000462715 EEA1Q15075 1411 aa17.94■□□□□ 0.46
TRAPPC3-205ENST00000462715 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
TRAPPC3-205ENST00000462715 GRIN2AQ12879 1464 aa17.89■□□□□ 0.45
TRAPPC3-205ENST00000462715 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
TRAPPC3-205ENST00000462715 TRIM26Q12899 539 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC3-205ENST00000462715 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms