RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 CD109Q6YHK3 1445 aa20.67■□□□□ 0.9
PBRM1-219ENST00000462207 CFDP1Q9UEE9 299 aaPredicted RBP20.66■□□□□ 0.9
PBRM1-219ENST00000462207 MIA2Q96PC5 1412 aa20.66■□□□□ 0.9
PBRM1-219ENST00000462207 ZNF644Q9H582 1327 aaPredicted RBP20.65■□□□□ 0.9
PBRM1-219ENST00000462207 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
PBRM1-219ENST00000462207 CAMSAP2Q08AD1 1489 aa20.63■□□□□ 0.89
PBRM1-219ENST00000462207 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
PBRM1-219ENST00000462207 ARAP3Q8WWN8 1544 aa20.63■□□□□ 0.89
PBRM1-219ENST00000462207 SAMD9LQ8IVG5 1584 aa20.63■□□□□ 0.89
PBRM1-219ENST00000462207 FAM50AQ14320 339 aaKnown RBP20.63■□□□□ 0.89
PBRM1-219ENST00000462207 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
PBRM1-219ENST00000462207 FANCAO15360 1455 aa20.61■□□□□ 0.89
PBRM1-219ENST00000462207 TSPOAP1O95153 1857 aa20.6■□□□□ 0.89
PBRM1-219ENST00000462207 PPRC1Q5VV67 1664 aaKnown RBP20.6■□□□□ 0.89
PBRM1-219ENST00000462207 EFCAB2Q5VUJ9 269 aa20.57■□□□□ 0.88
PBRM1-219ENST00000462207 SYCP2Q9BX26 1530 aa20.56■□□□□ 0.88
PBRM1-219ENST00000462207 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
PBRM1-219ENST00000462207 ABCC1P33527 1531 aa20.56■□□□□ 0.88
PBRM1-219ENST00000462207 CFAP74Q9C0B2 1584 aa20.55■□□□□ 0.88
PBRM1-219ENST00000462207 ARHGEF12Q9NZN5 1544 aa20.54■□□□□ 0.88
PBRM1-219ENST00000462207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
PBRM1-219ENST00000462207 ITGAEP38570 1179 aa20.53■□□□□ 0.88
PBRM1-219ENST00000462207 AKNAQ7Z591 1439 aa20.52■□□□□ 0.88
PBRM1-219ENST00000462207 ADGRL1O94910 1474 aa20.51■□□□□ 0.87
PBRM1-219ENST00000462207 NEO1Q92859 1461 aa20.51■□□□□ 0.87
PBRM1-219ENST00000462207 MBD5Q9P267 1494 aa20.51■□□□□ 0.87
PBRM1-219ENST00000462207 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
PBRM1-219ENST00000462207 HNRNPMP52272 730 aaKnown RBP eCLIP20.51■□□□□ 0.87
PBRM1-219ENST00000462207 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
PBRM1-219ENST00000462207 PLEKHH2Q8IVE3 1493 aa20.5■□□□□ 0.87
PBRM1-219ENST00000462207 TEX14Q8IWB6 1497 aa20.49■□□□□ 0.87
PBRM1-219ENST00000462207 ABCC5O15440 1437 aa20.49■□□□□ 0.87
PBRM1-219ENST00000462207 DAPK1P53355 1430 aa20.49■□□□□ 0.87
PBRM1-219ENST00000462207 PTPRKQ15262 1439 aa20.49■□□□□ 0.87
PBRM1-219ENST00000462207 KIAA1107Q9UPP5 1409 aa20.48■□□□□ 0.87
PBRM1-219ENST00000462207 ARHGEF5Q12774 1597 aa20.48■□□□□ 0.87
PBRM1-219ENST00000462207 SCAPERQ9BY12 1400 aa20.47■□□□□ 0.87
PBRM1-219ENST00000462207 CROCC2H7BZ55 1655 aa20.47■□□□□ 0.87
PBRM1-219ENST00000462207 TRAPPC8Q9Y2L5 1435 aa20.47■□□□□ 0.87
PBRM1-219ENST00000462207 CCDC141Q6ZP82 1450 aa20.46■□□□□ 0.87
PBRM1-219ENST00000462207 POGZQ7Z3K3 1410 aa20.41■□□□□ 0.86
PBRM1-219ENST00000462207 CHIC2Q9UKJ5 165 aa20.41■□□□□ 0.86
PBRM1-219ENST00000462207 AFAP1Q8N556 730 aa20.4■□□□□ 0.86
PBRM1-219ENST00000462207 SHANK2Q9UPX8 1470 aa20.39■□□□□ 0.86
PBRM1-219ENST00000462207 C9orf84Q5VXU9 1444 aa20.39■□□□□ 0.85
PBRM1-219ENST00000462207 FRMPD1Q5SYB0 1578 aa20.39■□□□□ 0.85
PBRM1-219ENST00000462207 DENND4BO75064 1496 aaPredicted RBP20.39■□□□□ 0.85
PBRM1-219ENST00000462207 COL17A1Q9UMD9 1497 aaPredicted RBP20.38■□□□□ 0.85
PBRM1-219ENST00000462207 RICTORQ6R327 1708 aa20.38■□□□□ 0.85
PBRM1-219ENST00000462207 RAPGEF3O95398 923 aa20.37■□□□□ 0.85
PBRM1-219ENST00000462207 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
PBRM1-219ENST00000462207 KDM5CP41229 1560 aa20.36■□□□□ 0.85
PBRM1-219ENST00000462207 MAST1Q9Y2H9 1570 aa20.36■□□□□ 0.85
PBRM1-219ENST00000462207 ADGBQ8N7X0 1667 aa20.36■□□□□ 0.85
PBRM1-219ENST00000462207 RSPH4AQ5TD94 716 aa20.35■□□□□ 0.85
PBRM1-219ENST00000462207 ZFYVE16Q7Z3T8 1539 aa20.35■□□□□ 0.85
PBRM1-219ENST00000462207 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
PBRM1-219ENST00000462207 TSPY4P0CV99 314 aa20.33■□□□□ 0.85
PBRM1-219ENST00000462207 TSPY10P0CW01 314 aa20.33■□□□□ 0.85
PBRM1-219ENST00000462207 ADGRL2O95490 1459 aa20.33■□□□□ 0.85
PBRM1-219ENST00000462207 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
PBRM1-219ENST00000462207 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
PBRM1-219ENST00000462207 ATP7AQ04656 1500 aa20.32■□□□□ 0.84
PBRM1-219ENST00000462207 HECW2Q9P2P5 1572 aa20.31■□□□□ 0.84
PBRM1-219ENST00000462207 ROCK1Q13464 1354 aa20.3■□□□□ 0.84
PBRM1-219ENST00000462207 NCOA1Q15788 1441 aa20.3■□□□□ 0.84
PBRM1-219ENST00000462207 KIDINS220Q9ULH0 1771 aa20.3■□□□□ 0.84
PBRM1-219ENST00000462207 ANKRD30AQ9BXX3 1397 aa20.29■□□□□ 0.84
PBRM1-219ENST00000462207 ZMYM4Q5VZL5 1548 aa20.28■□□□□ 0.84
PBRM1-219ENST00000462207 PLXNC1O60486 1568 aa20.28■□□□□ 0.84
PBRM1-219ENST00000462207 KDM6BO15054 1643 aa20.28■□□□□ 0.84
PBRM1-219ENST00000462207 GCC2Q8IWJ2 1684 aa20.28■□□□□ 0.84
PBRM1-219ENST00000462207 HFM1A2PYH4 1435 aa20.28■□□□□ 0.84
PBRM1-219ENST00000462207 NAIPQ13075 1403 aa20.28■□□□□ 0.84
PBRM1-219ENST00000462207 RTEL1-TNFRSF6BF6WH68 1400 aa20.27■□□□□ 0.84
PBRM1-219ENST00000462207 MLH3Q9UHC1 1453 aa20.27■□□□□ 0.84
PBRM1-219ENST00000462207 MYT1LQ9UL68 1186 aa20.27■□□□□ 0.84
PBRM1-219ENST00000462207 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
PBRM1-219ENST00000462207 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
PBRM1-219ENST00000462207 YEATS2Q9ULM3 1422 aa20.24■□□□□ 0.83
PBRM1-219ENST00000462207 SETD5Q9C0A6 1442 aa20.23■□□□□ 0.83
PBRM1-219ENST00000462207 DIP2CQ9Y2E4 1556 aa20.22■□□□□ 0.83
PBRM1-219ENST00000462207 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
PBRM1-219ENST00000462207 DUOX2Q9NRD8 1548 aa20.19■□□□□ 0.82
PBRM1-219ENST00000462207 MAGI2Q86UL8 1455 aa20.18■□□□□ 0.82
PBRM1-219ENST00000462207 ARHGEF40Q8TER5 1519 aa20.18■□□□□ 0.82
PBRM1-219ENST00000462207 ANKRD50Q9ULJ7 1429 aa20.18■□□□□ 0.82
PBRM1-219ENST00000462207 A2MP01023 1474 aa20.15■□□□□ 0.82
PBRM1-219ENST00000462207 ERBINQ96RT1 1412 aa20.13■□□□□ 0.81
PBRM1-219ENST00000462207 DHX29Q7Z478 1369 aaKnown RBP20.12■□□□□ 0.81
PBRM1-219ENST00000462207 SIGLEC1Q9BZZ2 1709 aa20.11■□□□□ 0.81
PBRM1-219ENST00000462207 ATP10AO60312 1499 aa20.11■□□□□ 0.81
PBRM1-219ENST00000462207 EIF2AK4Q9P2K8 1649 aaKnown RBP20.09■□□□□ 0.81
PBRM1-219ENST00000462207 REREQ9P2R6 1566 aa20.07■□□□□ 0.8
PBRM1-219ENST00000462207 UNC13BO14795 1591 aa20.06■□□□□ 0.8
PBRM1-219ENST00000462207 KIF3BO15066 747 aa20.04■□□□□ 0.8
PBRM1-219ENST00000462207 MROH1Q8NDA8 1641 aa20.04■□□□□ 0.8
PBRM1-219ENST00000462207 DEPDC5O75140 1603 aa20.03■□□□□ 0.8
PBRM1-219ENST00000462207 BCORL1Q5H9F3 1711 aa20.03■□□□□ 0.8
PBRM1-219ENST00000462207 HRCP23327 699 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms