RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 PREX2Q70Z35 1606 aa18.26■□□□□ 0.51
TRAF3IP1-204ENST00000462122 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
TRAF3IP1-204ENST00000462122 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
TRAF3IP1-204ENST00000462122 AKNAQ7Z591 1439 aa18.24■□□□□ 0.51
TRAF3IP1-204ENST00000462122 GPATCH8Q9UKJ3 1502 aaKnown RBP18.24■□□□□ 0.51
TRAF3IP1-204ENST00000462122 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
TRAF3IP1-204ENST00000462122 NCOA2Q15596 1464 aa18.24■□□□□ 0.51
TRAF3IP1-204ENST00000462122 COL17A1Q9UMD9 1497 aaPredicted RBP18.23■□□□□ 0.51
TRAF3IP1-204ENST00000462122 CDC42BPAQ5VT25 1732 aa18.22■□□□□ 0.51
TRAF3IP1-204ENST00000462122 CDC42BPBQ9Y5S2 1711 aa18.21■□□□□ 0.51
TRAF3IP1-204ENST00000462122 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
TRAF3IP1-204ENST00000462122 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
TRAF3IP1-204ENST00000462122 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
TRAF3IP1-204ENST00000462122 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
TRAF3IP1-204ENST00000462122 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
TRAF3IP1-204ENST00000462122 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.5
TRAF3IP1-204ENST00000462122 ABCC1P33527 1531 aa18.14■□□□□ 0.49
TRAF3IP1-204ENST00000462122 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
TRAF3IP1-204ENST00000462122 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
TRAF3IP1-204ENST00000462122 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
TRAF3IP1-204ENST00000462122 MYOM3Q5VTT5 1437 aa18.13■□□□□ 0.49
TRAF3IP1-204ENST00000462122 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
TRAF3IP1-204ENST00000462122 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
TRAF3IP1-204ENST00000462122 ZNF518AQ6AHZ1 1483 aa18.12■□□□□ 0.49
TRAF3IP1-204ENST00000462122 RICTORQ6R327 1708 aa18.12■□□□□ 0.49
TRAF3IP1-204ENST00000462122 MIA2Q96PC5 1412 aa18.11■□□□□ 0.49
TRAF3IP1-204ENST00000462122 KIAA1107Q9UPP5 1409 aa18.11■□□□□ 0.49
TRAF3IP1-204ENST00000462122 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
TRAF3IP1-204ENST00000462122 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.48
TRAF3IP1-204ENST00000462122 ARHGEF12Q9NZN5 1544 aa18.08■□□□□ 0.48
TRAF3IP1-204ENST00000462122 MAGI2Q86UL8 1455 aa18.07■□□□□ 0.48
TRAF3IP1-204ENST00000462122 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
TRAF3IP1-204ENST00000462122 KDM5CP41229 1560 aa18.06■□□□□ 0.48
TRAF3IP1-204ENST00000462122 TRAPPC8Q9Y2L5 1435 aa18.06■□□□□ 0.48
TRAF3IP1-204ENST00000462122 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
TRAF3IP1-204ENST00000462122 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
TRAF3IP1-204ENST00000462122 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRAF3IP1-204ENST00000462122 FGD6Q6ZV73 1430 aa18.03■□□□□ 0.48
TRAF3IP1-204ENST00000462122 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
TRAF3IP1-204ENST00000462122 ZFYVE16Q7Z3T8 1539 aa18.02■□□□□ 0.47
TRAF3IP1-204ENST00000462122 ARHGEF40Q8TER5 1519 aa18.02■□□□□ 0.47
TRAF3IP1-204ENST00000462122 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
TRAF3IP1-204ENST00000462122 HECW2Q9P2P5 1572 aa18.01■□□□□ 0.47
TRAF3IP1-204ENST00000462122 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
TRAF3IP1-204ENST00000462122 CCDC141Q6ZP82 1450 aa18■□□□□ 0.47
TRAF3IP1-204ENST00000462122 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
TRAF3IP1-204ENST00000462122 TCOF1Q13428 1488 aaKnown RBP17.99■□□□□ 0.47
TRAF3IP1-204ENST00000462122 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
TRAF3IP1-204ENST00000462122 YEATS2Q9ULM3 1422 aa17.98■□□□□ 0.47
TRAF3IP1-204ENST00000462122 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
TRAF3IP1-204ENST00000462122 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
TRAF3IP1-204ENST00000462122 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.47
TRAF3IP1-204ENST00000462122 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
TRAF3IP1-204ENST00000462122 ATP10AO60312 1499 aa17.95■□□□□ 0.46
TRAF3IP1-204ENST00000462122 ATP7AQ04656 1500 aa17.94■□□□□ 0.46
TRAF3IP1-204ENST00000462122 RTEL1-TNFRSF6BF6WH68 1400 aa17.94■□□□□ 0.46
TRAF3IP1-204ENST00000462122 DIP2CQ9Y2E4 1556 aa17.93■□□□□ 0.46
TRAF3IP1-204ENST00000462122 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
TRAF3IP1-204ENST00000462122 KIDINS220Q9ULH0 1771 aa17.93■□□□□ 0.46
TRAF3IP1-204ENST00000462122 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
TRAF3IP1-204ENST00000462122 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
TRAF3IP1-204ENST00000462122 ABCA6Q8N139 1617 aa17.91■□□□□ 0.46
TRAF3IP1-204ENST00000462122 REREQ9P2R6 1566 aa17.91■□□□□ 0.46
TRAF3IP1-204ENST00000462122 SHANK2Q9UPX8 1470 aa17.89■□□□□ 0.45
TRAF3IP1-204ENST00000462122 MAST1Q9Y2H9 1570 aa17.89■□□□□ 0.45
TRAF3IP1-204ENST00000462122 FAM50AQ14320 339 aaKnown RBP17.89■□□□□ 0.45
TRAF3IP1-204ENST00000462122 DNMT1P26358 1616 aaKnown RBP17.89■□□□□ 0.45
TRAF3IP1-204ENST00000462122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
TRAF3IP1-204ENST00000462122 ABCC5O15440 1437 aa17.88■□□□□ 0.45
TRAF3IP1-204ENST00000462122 DAPK1P53355 1430 aa17.88■□□□□ 0.45
TRAF3IP1-204ENST00000462122 ARID4BQ4LE39 1312 aaPredicted RBP17.87■□□□□ 0.45
TRAF3IP1-204ENST00000462122 RRBP1Q9P2E9 1410 aaKnown RBP17.86■□□□□ 0.45
TRAF3IP1-204ENST00000462122 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
TRAF3IP1-204ENST00000462122 AGLP35573 1532 aa17.84■□□□□ 0.45
TRAF3IP1-204ENST00000462122 A2MP01023 1474 aa17.84■□□□□ 0.45
TRAF3IP1-204ENST00000462122 ADGBQ8N7X0 1667 aa17.83■□□□□ 0.45
TRAF3IP1-204ENST00000462122 PLXNC1O60486 1568 aa17.83■□□□□ 0.44
TRAF3IP1-204ENST00000462122 SIGLEC1Q9BZZ2 1709 aa17.81■□□□□ 0.44
TRAF3IP1-204ENST00000462122 BCORL1Q5H9F3 1711 aa17.81■□□□□ 0.44
TRAF3IP1-204ENST00000462122 DHX29Q7Z478 1369 aaKnown RBP17.8■□□□□ 0.44
TRAF3IP1-204ENST00000462122 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
TRAF3IP1-204ENST00000462122 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
TRAF3IP1-204ENST00000462122 ADGRL2O95490 1459 aa17.78■□□□□ 0.44
TRAF3IP1-204ENST00000462122 KIF15Q9NS87 1388 aa17.77■□□□□ 0.43
TRAF3IP1-204ENST00000462122 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.43
TRAF3IP1-204ENST00000462122 ADAMTSL3P82987 1691 aa17.76■□□□□ 0.43
TRAF3IP1-204ENST00000462122 NCOA1Q15788 1441 aa17.75■□□□□ 0.43
TRAF3IP1-204ENST00000462122 MLECQ14165 292 aa17.75■□□□□ 0.43
TRAF3IP1-204ENST00000462122 CHIC2Q9UKJ5 165 aa17.75■□□□□ 0.43
TRAF3IP1-204ENST00000462122 PTPRKQ15262 1439 aa17.74■□□□□ 0.43
TRAF3IP1-204ENST00000462122 ROCK1Q13464 1354 aa17.74■□□□□ 0.43
TRAF3IP1-204ENST00000462122 ERBINQ96RT1 1412 aa17.73■□□□□ 0.43
TRAF3IP1-204ENST00000462122 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
TRAF3IP1-204ENST00000462122 MADDQ8WXG6 1647 aa17.72■□□□□ 0.43
TRAF3IP1-204ENST00000462122 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
TRAF3IP1-204ENST00000462122 ITGAEP38570 1179 aa17.71■□□□□ 0.43
TRAF3IP1-204ENST00000462122 FOXD1Q16676 465 aa17.7■□□□□ 0.42
TRAF3IP1-204ENST00000462122 KIF3BO15066 747 aa17.69■□□□□ 0.42
TRAF3IP1-204ENST00000462122 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
TRAF3IP1-204ENST00000462122 FER1L4A9Z1Z3 1794 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms