RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PHLDB1Q86UU1 1377 aa8.64□□□□□ -1.03
RNU1-88P-201ENST00000459274 C1QBPQ07021 282 aaKnown RBP8.64□□□□□ -1.03
RNU1-88P-201ENST00000459274 MYT1LQ9UL68 1186 aa8.64□□□□□ -1.03
RNU1-88P-201ENST00000459274 RIMBP3CA6NJZ7 1639 aa8.64□□□□□ -1.03
RNU1-88P-201ENST00000459274 RIMBP3BA6NNM3 1639 aa8.64□□□□□ -1.03
RNU1-88P-201ENST00000459274 PTPN23Q9H3S7 1636 aa8.64□□□□□ -1.03
RNU1-88P-201ENST00000459274 RIMBP3Q9UFD9 1639 aa8.64□□□□□ -1.03
RNU1-88P-201ENST00000459274 EFCAB2Q5VUJ9 269 aa8.63□□□□□ -1.03
RNU1-88P-201ENST00000459274 ARHGAP5Q13017 1502 aa8.61□□□□□ -1.03
RNU1-88P-201ENST00000459274 SP7Q8TDD2 431 aaPredicted RBP8.61□□□□□ -1.03
RNU1-88P-201ENST00000459274 WDR7Q9Y4E6 1490 aa8.61□□□□□ -1.03
RNU1-88P-201ENST00000459274 CDC42BPAQ5VT25 1732 aa8.6□□□□□ -1.03
RNU1-88P-201ENST00000459274 MAGI3Q5TCQ9 1506 aa8.6□□□□□ -1.03
RNU1-88P-201ENST00000459274 PLEKHH2Q8IVE3 1493 aa8.6□□□□□ -1.03
RNU1-88P-201ENST00000459274 ASXL2Q76L83 1435 aa8.6□□□□□ -1.03
RNU1-88P-201ENST00000459274 PREX2Q70Z35 1606 aa8.58□□□□□ -1.04
RNU1-88P-201ENST00000459274 CFAP74Q9C0B2 1584 aa8.57□□□□□ -1.04
RNU1-88P-201ENST00000459274 CHIC2Q9UKJ5 165 aa8.57□□□□□ -1.04
RNU1-88P-201ENST00000459274 GPATCH8Q9UKJ3 1502 aaKnown RBP8.57□□□□□ -1.04
RNU1-88P-201ENST00000459274 CDC42BPBQ9Y5S2 1711 aa8.57□□□□□ -1.04
RNU1-88P-201ENST00000459274 TCOF1Q13428 1488 aaKnown RBP8.57□□□□□ -1.04
RNU1-88P-201ENST00000459274 SETD5Q9C0A6 1442 aa8.56□□□□□ -1.04
RNU1-88P-201ENST00000459274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.56□□□□□ -1.044e-8■■■■■ 66.4
RNU1-88P-201ENST00000459274 HRCP23327 699 aa8.56□□□□□ -1.04
RNU1-88P-201ENST00000459274 TRIM52Q96A61 297 aa8.56□□□□□ -1.04
RNU1-88P-201ENST00000459274 ANKRD30AQ9BXX3 1397 aa8.56□□□□□ -1.04
RNU1-88P-201ENST00000459274 CAMSAP2Q08AD1 1489 aa8.56□□□□□ -1.04
RNU1-88P-201ENST00000459274 PLCH2O75038 1416 aa8.55□□□□□ -1.04
RNU1-88P-201ENST00000459274 DNMT1P26358 1616 aaKnown RBP8.54□□□□□ -1.04
RNU1-88P-201ENST00000459274 ABCA9Q8IUA7 1624 aa8.54□□□□□ -1.04
RNU1-88P-201ENST00000459274 ADGBQ8N7X0 1667 aa8.54□□□□□ -1.04
RNU1-88P-201ENST00000459274 ABCC10Q5T3U5 1492 aa8.54□□□□□ -1.04
RNU1-88P-201ENST00000459274 HNRNPMP52272 730 aaKnown RBP eCLIP8.54□□□□□ -1.04
RNU1-88P-201ENST00000459274 MAPKBP1O60336 1514 aa8.54□□□□□ -1.04
RNU1-88P-201ENST00000459274 DAPK1P53355 1430 aa8.54□□□□□ -1.04
RNU1-88P-201ENST00000459274 CD109Q6YHK3 1445 aa8.54□□□□□ -1.04
RNU1-88P-201ENST00000459274 TTC37Q6PGP7 1564 aa8.53□□□□□ -1.04
RNU1-88P-201ENST00000459274 FAM69CQ0P6D2 419 aa8.53□□□□□ -1.04
RNU1-88P-201ENST00000459274 RRP7BPQ9NSQ0 103 aa8.53□□□□□ -1.04
RNU1-88P-201ENST00000459274 DMRT2Q9Y5R5 561 aa8.53□□□□□ -1.04
RNU1-88P-201ENST00000459274 ARAP3Q8WWN8 1544 aa8.53□□□□□ -1.04
RNU1-88P-201ENST00000459274 FANCAO15360 1455 aa8.52□□□□□ -1.05
RNU1-88P-201ENST00000459274 ZNF644Q9H582 1327 aaPredicted RBP8.52□□□□□ -1.05
RNU1-88P-201ENST00000459274 CLSPNQ9HAW4 1339 aa8.52□□□□□ -1.05
RNU1-88P-201ENST00000459274 ROCK1Q13464 1354 aa8.51□□□□□ -1.05
RNU1-88P-201ENST00000459274 CROCC2H7BZ55 1655 aa8.51□□□□□ -1.05
RNU1-88P-201ENST00000459274 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
RNU1-88P-201ENST00000459274 ARHGEF5Q12774 1597 aa8.51□□□□□ -1.05
RNU1-88P-201ENST00000459274 TSPOAP1O95153 1857 aa8.51□□□□□ -1.05
RNU1-88P-201ENST00000459274 CCDC141Q6ZP82 1450 aa8.51□□□□□ -1.05
RNU1-88P-201ENST00000459274 TEX14Q8IWB6 1497 aa8.51□□□□□ -1.05
RNU1-88P-201ENST00000459274 RAB3GAP2Q9H2M9 1393 aa8.5□□□□□ -1.05
RNU1-88P-201ENST00000459274 HFM1A2PYH4 1435 aa8.5□□□□□ -1.05
RNU1-88P-201ENST00000459274 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
RNU1-88P-201ENST00000459274 SPAG9O60271 1321 aaKnown RBP8.5□□□□□ -1.05
RNU1-88P-201ENST00000459274 GCC2Q8IWJ2 1684 aa8.49□□□□□ -1.05
RNU1-88P-201ENST00000459274 AKNAQ7Z591 1439 aa8.49□□□□□ -1.05
RNU1-88P-201ENST00000459274 ADGRL1O94910 1474 aa8.49□□□□□ -1.05
RNU1-88P-201ENST00000459274 SAMD9LQ8IVG5 1584 aa8.48□□□□□ -1.05
RNU1-88P-201ENST00000459274 C9orf84Q5VXU9 1444 aa8.48□□□□□ -1.05
RNU1-88P-201ENST00000459274 SHANK2Q9UPX8 1470 aa8.48□□□□□ -1.05
RNU1-88P-201ENST00000459274 SYCP2Q9BX26 1530 aa8.48□□□□□ -1.05
RNU1-88P-201ENST00000459274 GLI2P10070 1586 aa8.48□□□□□ -1.05
RNU1-88P-201ENST00000459274 ABCC5O15440 1437 aa8.47□□□□□ -1.05
RNU1-88P-201ENST00000459274 SCAPERQ9BY12 1400 aa8.47□□□□□ -1.05
RNU1-88P-201ENST00000459274 NEO1Q92859 1461 aa8.47□□□□□ -1.05
RNU1-88P-201ENST00000459274 DNAJC5Q9H3Z4 198 aa8.47□□□□□ -1.05
RNU1-88P-201ENST00000459274 PPP6R1Q9UPN7 881 aa8.47□□□□□ -1.05
RNU1-88P-201ENST00000459274 ZNF518AQ6AHZ1 1483 aa8.45□□□□□ -1.06
RNU1-88P-201ENST00000459274 MAP3K4Q9Y6R4 1608 aa8.45□□□□□ -1.06
RNU1-88P-201ENST00000459274 SLC4A1APQ9BWU0 796 aaKnown RBP8.45□□□□□ -1.06
RNU1-88P-201ENST00000459274 KANK1Q14678 1352 aa8.45□□□□□ -1.06
RNU1-88P-201ENST00000459274 RTEL1-TNFRSF6BF6WH68 1400 aa8.45□□□□□ -1.06
RNU1-88P-201ENST00000459274 NAIPQ13075 1403 aa8.45□□□□□ -1.06
RNU1-88P-201ENST00000459274 NCOA1Q15788 1441 aa8.45□□□□□ -1.06
RNU1-88P-201ENST00000459274 ANKRD50Q9ULJ7 1429 aa8.45□□□□□ -1.06
RNU1-88P-201ENST00000459274 ABCC1P33527 1531 aa8.44□□□□□ -1.06
RNU1-88P-201ENST00000459274 KIF15Q9NS87 1388 aa8.44□□□□□ -1.06
RNU1-88P-201ENST00000459274 DENND4BO75064 1496 aaPredicted RBP8.44□□□□□ -1.06
RNU1-88P-201ENST00000459274 ADGRL2O95490 1459 aa8.44□□□□□ -1.06
RNU1-88P-201ENST00000459274 MAST1Q9Y2H9 1570 aa8.44□□□□□ -1.06
RNU1-88P-201ENST00000459274 AFAP1Q8N556 730 aa8.43□□□□□ -1.06
RNU1-88P-201ENST00000459274 DUOX2Q9NRD8 1548 aa8.43□□□□□ -1.06
RNU1-88P-201ENST00000459274 DIP2BQ9P265 1576 aa8.43□□□□□ -1.06
RNU1-88P-201ENST00000459274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.42□□□□□ -1.06
RNU1-88P-201ENST00000459274 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
RNU1-88P-201ENST00000459274 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
RNU1-88P-201ENST00000459274 MBD5Q9P267 1494 aa8.42□□□□□ -1.06
RNU1-88P-201ENST00000459274 PLXNC1O60486 1568 aa8.42□□□□□ -1.06
RNU1-88P-201ENST00000459274 KIF13AQ9H1H9 1805 aa8.41□□□□□ -1.06
RNU1-88P-201ENST00000459274 ATP7AQ04656 1500 aa8.41□□□□□ -1.06
RNU1-88P-201ENST00000459274 PTPRKQ15262 1439 aa8.41□□□□□ -1.06
RNU1-88P-201ENST00000459274 NUP155O75694 1391 aa8.41□□□□□ -1.06
RNU1-88P-201ENST00000459274 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
RNU1-88P-201ENST00000459274 MPHOSPH9Q99550 1183 aa8.41□□□□□ -1.06
RNU1-88P-201ENST00000459274 DHX57Q6P158 1386 aaKnown RBP8.4□□□□□ -1.06
RNU1-88P-201ENST00000459274 ERBINQ96RT1 1412 aa8.39□□□□□ -1.07
RNU1-88P-201ENST00000459274 TRAPPC8Q9Y2L5 1435 aa8.39□□□□□ -1.07
RNU1-88P-201ENST00000459274 KIF3BO15066 747 aa8.39□□□□□ -1.07
RNU1-88P-201ENST00000459274 HECW2Q9P2P5 1572 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms