RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
TRAPPC12-212ENST00000457845 FANCAO15360 1455 aa18.35■□□□□ 0.53
TRAPPC12-212ENST00000457845 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
TRAPPC12-212ENST00000457845 ARHGAP5Q13017 1502 aa18.33■□□□□ 0.53
TRAPPC12-212ENST00000457845 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
TRAPPC12-212ENST00000457845 AKNAQ7Z591 1439 aa18.31■□□□□ 0.52
TRAPPC12-212ENST00000457845 MYOM3Q5VTT5 1437 aa18.3■□□□□ 0.52
TRAPPC12-212ENST00000457845 KDM6BO15054 1643 aa18.3■□□□□ 0.52
TRAPPC12-212ENST00000457845 SAMD9LQ8IVG5 1584 aa18.3■□□□□ 0.52
TRAPPC12-212ENST00000457845 COL17A1Q9UMD9 1497 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC12-212ENST00000457845 RICTORQ6R327 1708 aa18.27■□□□□ 0.52
TRAPPC12-212ENST00000457845 MIA2Q96PC5 1412 aa18.27■□□□□ 0.52
TRAPPC12-212ENST00000457845 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC12-212ENST00000457845 ABCC1P33527 1531 aa18.27■□□□□ 0.51
TRAPPC12-212ENST00000457845 ADGRL1O94910 1474 aa18.26■□□□□ 0.51
TRAPPC12-212ENST00000457845 KIAA1107Q9UPP5 1409 aa18.23■□□□□ 0.51
TRAPPC12-212ENST00000457845 FRMPD1Q5SYB0 1578 aa18.23■□□□□ 0.51
TRAPPC12-212ENST00000457845 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
TRAPPC12-212ENST00000457845 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
TRAPPC12-212ENST00000457845 SCAPERQ9BY12 1400 aa18.23■□□□□ 0.51
TRAPPC12-212ENST00000457845 PPARGC1BQ86YN6 1023 aaKnown RBP18.22■□□□□ 0.51
TRAPPC12-212ENST00000457845 FGD6Q6ZV73 1430 aa18.22■□□□□ 0.51
TRAPPC12-212ENST00000457845 DENND4BO75064 1496 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC12-212ENST00000457845 PTPN23Q9H3S7 1636 aa18.21■□□□□ 0.51
TRAPPC12-212ENST00000457845 CAMSAP2Q08AD1 1489 aa18.2■□□□□ 0.5
TRAPPC12-212ENST00000457845 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC12-212ENST00000457845 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC12-212ENST00000457845 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
TRAPPC12-212ENST00000457845 SYCP2Q9BX26 1530 aa18.19■□□□□ 0.5
TRAPPC12-212ENST00000457845 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
TRAPPC12-212ENST00000457845 MBD5Q9P267 1494 aa18.19■□□□□ 0.5
TRAPPC12-212ENST00000457845 KDM5CP41229 1560 aa18.18■□□□□ 0.5
TRAPPC12-212ENST00000457845 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
TRAPPC12-212ENST00000457845 ARHGEF5Q12774 1597 aa18.17■□□□□ 0.5
TRAPPC12-212ENST00000457845 ZNF518AQ6AHZ1 1483 aa18.17■□□□□ 0.5
TRAPPC12-212ENST00000457845 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
TRAPPC12-212ENST00000457845 RAPGEF3O95398 923 aa18.16■□□□□ 0.5
TRAPPC12-212ENST00000457845 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.491e-6■■■■□ 24.3
TRAPPC12-212ENST00000457845 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
TRAPPC12-212ENST00000457845 RRBP1Q9P2E9 1410 aaKnown RBP18.13■□□□□ 0.49
TRAPPC12-212ENST00000457845 AFAP1Q8N556 730 aa18.12■□□□□ 0.49
TRAPPC12-212ENST00000457845 MAGI2Q86UL8 1455 aa18.12■□□□□ 0.49
TRAPPC12-212ENST00000457845 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
TRAPPC12-212ENST00000457845 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRAPPC12-212ENST00000457845 CCDC141Q6ZP82 1450 aa18.11■□□□□ 0.49
TRAPPC12-212ENST00000457845 MLH3Q9UHC1 1453 aa18.11■□□□□ 0.49
TRAPPC12-212ENST00000457845 HECW2Q9P2P5 1572 aa18.11■□□□□ 0.49
TRAPPC12-212ENST00000457845 DNMT1P26358 1616 aaKnown RBP18.11■□□□□ 0.49
TRAPPC12-212ENST00000457845 CROCC2H7BZ55 1655 aa18.1■□□□□ 0.49
TRAPPC12-212ENST00000457845 INO80Q9ULG1 1556 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC12-212ENST00000457845 MAST1Q9Y2H9 1570 aa18.08■□□□□ 0.48
TRAPPC12-212ENST00000457845 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
TRAPPC12-212ENST00000457845 ARHGEF40Q8TER5 1519 aa18.06■□□□□ 0.48
TRAPPC12-212ENST00000457845 ABCC5O15440 1437 aa18.06■□□□□ 0.48
TRAPPC12-212ENST00000457845 ATP7AQ04656 1500 aa18.05■□□□□ 0.48
TRAPPC12-212ENST00000457845 ZFYVE16Q7Z3T8 1539 aa18.05■□□□□ 0.48
TRAPPC12-212ENST00000457845 DAPK1P53355 1430 aa18.05■□□□□ 0.48
TRAPPC12-212ENST00000457845 SHANK2Q9UPX8 1470 aa18.04■□□□□ 0.48
TRAPPC12-212ENST00000457845 ABCA6Q8N139 1617 aa18.04■□□□□ 0.48
TRAPPC12-212ENST00000457845 YEATS2Q9ULM3 1422 aa18.04■□□□□ 0.48
TRAPPC12-212ENST00000457845 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
TRAPPC12-212ENST00000457845 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
TRAPPC12-212ENST00000457845 DIP2CQ9Y2E4 1556 aa18.03■□□□□ 0.48
TRAPPC12-212ENST00000457845 ADGBQ8N7X0 1667 aa18.02■□□□□ 0.47
TRAPPC12-212ENST00000457845 REREQ9P2R6 1566 aa18.01■□□□□ 0.47
TRAPPC12-212ENST00000457845 TSPY4P0CV99 314 aa18.01■□□□□ 0.47
TRAPPC12-212ENST00000457845 TSPY10P0CW01 314 aa18.01■□□□□ 0.47
TRAPPC12-212ENST00000457845 ATP10AO60312 1499 aa18■□□□□ 0.47
TRAPPC12-212ENST00000457845 PLXNC1O60486 1568 aa18■□□□□ 0.47
TRAPPC12-212ENST00000457845 C9orf84Q5VXU9 1444 aa17.99■□□□□ 0.47
TRAPPC12-212ENST00000457845 SIGLEC1Q9BZZ2 1709 aa17.98■□□□□ 0.47
TRAPPC12-212ENST00000457845 PTPRKQ15262 1439 aa17.98■□□□□ 0.47
TRAPPC12-212ENST00000457845 ADGRL2O95490 1459 aa17.96■□□□□ 0.47
TRAPPC12-212ENST00000457845 MYT1LQ9UL68 1186 aa17.94■□□□□ 0.46
TRAPPC12-212ENST00000457845 NCOA1Q15788 1441 aa17.93■□□□□ 0.46
TRAPPC12-212ENST00000457845 AGLP35573 1532 aa17.93■□□□□ 0.46
TRAPPC12-212ENST00000457845 A2MP01023 1474 aa17.92■□□□□ 0.46
TRAPPC12-212ENST00000457845 BCORL1Q5H9F3 1711 aa17.92■□□□□ 0.46
TRAPPC12-212ENST00000457845 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
TRAPPC12-212ENST00000457845 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
TRAPPC12-212ENST00000457845 ANKRD30AQ9BXX3 1397 aa17.91■□□□□ 0.46
TRAPPC12-212ENST00000457845 DUOX2Q9NRD8 1548 aa17.89■□□□□ 0.45
TRAPPC12-212ENST00000457845 CHIC2Q9UKJ5 165 aa17.89■□□□□ 0.45
TRAPPC12-212ENST00000457845 EIF2AK4Q9P2K8 1649 aaKnown RBP17.88■□□□□ 0.45
TRAPPC12-212ENST00000457845 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
TRAPPC12-212ENST00000457845 ITGAEP38570 1179 aa17.86■□□□□ 0.45
TRAPPC12-212ENST00000457845 ADAMTSL3P82987 1691 aa17.84■□□□□ 0.45
TRAPPC12-212ENST00000457845 GCC2Q8IWJ2 1684 aa17.84■□□□□ 0.45
TRAPPC12-212ENST00000457845 ERBINQ96RT1 1412 aa17.84■□□□□ 0.45
TRAPPC12-212ENST00000457845 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
TRAPPC12-212ENST00000457845 RNF17Q9BXT8 1623 aaKnown RBP17.83■□□□□ 0.44
TRAPPC12-212ENST00000457845 DEPDC5O75140 1603 aa17.8■□□□□ 0.44
TRAPPC12-212ENST00000457845 NAIPQ13075 1403 aa17.8■□□□□ 0.44
TRAPPC12-212ENST00000457845 ANKRD50Q9ULJ7 1429 aa17.8■□□□□ 0.44
TRAPPC12-212ENST00000457845 ARID4BQ4LE39 1312 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC12-212ENST00000457845 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
TRAPPC12-212ENST00000457845 MROH1Q8NDA8 1641 aa17.78■□□□□ 0.44
TRAPPC12-212ENST00000457845 FER1L4A9Z1Z3 1794 aa17.78■□□□□ 0.44
TRAPPC12-212ENST00000457845 KIF3BO15066 747 aa17.77■□□□□ 0.44
TRAPPC12-212ENST00000457845 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms