RNA–Protein interactions for RNA: ENST00000457029.3

FARP1-205, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-205ENST00000457029 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
FARP1-205ENST00000457029 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
FARP1-205ENST00000457029 NUP153P49790 1475 aaKnown RBP13.62□□□□□ -0.23
FARP1-205ENST00000457029 WDR7Q9Y4E6 1490 aa13.62□□□□□ -0.23
FARP1-205ENST00000457029 ZCCHC11Q5TAX3 1644 aaKnown RBP13.62□□□□□ -0.23
FARP1-205ENST00000457029 P3H3Q8IVL6 736 aa13.62□□□□□ -0.23
FARP1-205ENST00000457029 BCORL1Q5H9F3 1711 aa13.61□□□□□ -0.23
FARP1-205ENST00000457029 CD109Q6YHK3 1445 aa13.61□□□□□ -0.23
FARP1-205ENST00000457029 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
FARP1-205ENST00000457029 ARAP3Q8WWN8 1544 aa13.57□□□□□ -0.24
FARP1-205ENST00000457029 RIMS1Q86UR5 1692 aaKnown RBP13.56□□□□□ -0.24
FARP1-205ENST00000457029 EHBP1L1Q8N3D4 1523 aa13.56□□□□□ -0.24
FARP1-205ENST00000457029 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
FARP1-205ENST00000457029 STRCQ7RTU9 1775 aa13.53□□□□□ -0.24
FARP1-205ENST00000457029 ARID4BQ4LE39 1312 aaPredicted RBP13.5□□□□□ -0.25
FARP1-205ENST00000457029 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
FARP1-205ENST00000457029 ATP10BO94823 1461 aa13.49□□□□□ -0.25
FARP1-205ENST00000457029 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
FARP1-205ENST00000457029 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
FARP1-205ENST00000457029 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
FARP1-205ENST00000457029 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
FARP1-205ENST00000457029 APLP2Q06481 763 aa13.48□□□□□ -0.25
FARP1-205ENST00000457029 SUPT6HQ7KZ85 1726 aaKnown RBP13.46□□□□□ -0.25
FARP1-205ENST00000457029 TROQ12816 1431 aaPredicted RBP13.46□□□□□ -0.26
FARP1-205ENST00000457029 KCNH8Q96L42 1107 aa13.45□□□□□ -0.26
FARP1-205ENST00000457029 LTBP4Q8N2S1 1624 aa13.45□□□□□ -0.26
FARP1-205ENST00000457029 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
FARP1-205ENST00000457029 MTUS2Q5JR59 1369 aa13.44□□□□□ -0.26
FARP1-205ENST00000457029 NCOA2Q15596 1464 aa13.43□□□□□ -0.26
FARP1-205ENST00000457029 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
FARP1-205ENST00000457029 YEATS2Q9ULM3 1422 aa13.42□□□□□ -0.26
FARP1-205ENST00000457029 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
FARP1-205ENST00000457029 KIF14Q15058 1648 aa13.4□□□□□ -0.26
FARP1-205ENST00000457029 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
FARP1-205ENST00000457029 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
FARP1-205ENST00000457029 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
FARP1-205ENST00000457029 PREX1Q8TCU6 1659 aa13.39□□□□□ -0.27
FARP1-205ENST00000457029 FRMPD1Q5SYB0 1578 aa13.38□□□□□ -0.27
FARP1-205ENST00000457029 NEO1Q92859 1461 aa13.38□□□□□ -0.27
FARP1-205ENST00000457029 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
FARP1-205ENST00000457029 MYOM3Q5VTT5 1437 aa13.38□□□□□ -0.27
FARP1-205ENST00000457029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.37□□□□□ -0.27
FARP1-205ENST00000457029 ATP1B4Q9UN42 357 aaPredicted RBP13.37□□□□□ -0.27
FARP1-205ENST00000457029 FANCAO15360 1455 aa13.36□□□□□ -0.27
FARP1-205ENST00000457029 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
FARP1-205ENST00000457029 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
FARP1-205ENST00000457029 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
FARP1-205ENST00000457029 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
FARP1-205ENST00000457029 TTC37Q6PGP7 1564 aa13.35□□□□□ -0.27
FARP1-205ENST00000457029 CCNB3Q8WWL7 1395 aa13.34□□□□□ -0.27
FARP1-205ENST00000457029 SIGLEC1Q9BZZ2 1709 aa13.34□□□□□ -0.27
FARP1-205ENST00000457029 MIA2Q96PC5 1412 aa13.34□□□□□ -0.27
FARP1-205ENST00000457029 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
FARP1-205ENST00000457029 PTPRTO14522 1441 aa13.33□□□□□ -0.28
FARP1-205ENST00000457029 FER1L4A9Z1Z3 1794 aa13.32□□□□□ -0.28
FARP1-205ENST00000457029 PREX2Q70Z35 1606 aa13.32□□□□□ -0.28
FARP1-205ENST00000457029 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
FARP1-205ENST00000457029 CDC42BPAQ5VT25 1732 aa13.32□□□□□ -0.28
FARP1-205ENST00000457029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.32□□□□□ -0.28
FARP1-205ENST00000457029 GPATCH8Q9UKJ3 1502 aaKnown RBP13.32□□□□□ -0.28
FARP1-205ENST00000457029 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
FARP1-205ENST00000457029 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
FARP1-205ENST00000457029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■□□□ 14.4
FARP1-205ENST00000457029 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
FARP1-205ENST00000457029 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
FARP1-205ENST00000457029 SETD1BQ9UPS6 1966 aaKnown RBP13.29□□□□□ -0.28
FARP1-205ENST00000457029 UHRF1BP1Q6BDS2 1440 aa13.27□□□□□ -0.29
FARP1-205ENST00000457029 UBAP1LF5GYI3 381 aa13.26□□□□□ -0.29
FARP1-205ENST00000457029 DENND4BO75064 1496 aaPredicted RBP13.26□□□□□ -0.29
FARP1-205ENST00000457029 RICTORQ6R327 1708 aa13.26□□□□□ -0.29
FARP1-205ENST00000457029 MYO5CQ9NQX4 1742 aa13.26□□□□□ -0.29
FARP1-205ENST00000457029 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
FARP1-205ENST00000457029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
FARP1-205ENST00000457029 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
FARP1-205ENST00000457029 ZMYM4Q5VZL5 1548 aa13.24□□□□□ -0.29
FARP1-205ENST00000457029 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
FARP1-205ENST00000457029 ZFYVE16Q7Z3T8 1539 aa13.23□□□□□ -0.29
FARP1-205ENST00000457029 CAMSAP2Q08AD1 1489 aa13.23□□□□□ -0.29
FARP1-205ENST00000457029 HSPA1LP34931 641 aa13.23□□□□□ -0.29
FARP1-205ENST00000457029 MLECQ14165 292 aa13.23□□□□□ -0.29
FARP1-205ENST00000457029 DNMT1P26358 1616 aaKnown RBP13.23□□□□□ -0.29
FARP1-205ENST00000457029 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
FARP1-205ENST00000457029 SAMD9LQ8IVG5 1584 aa13.22□□□□□ -0.29
FARP1-205ENST00000457029 MAGI2Q86UL8 1455 aa13.22□□□□□ -0.29
FARP1-205ENST00000457029 PLCH2O75038 1416 aa13.22□□□□□ -0.29
FARP1-205ENST00000457029 ARHGEF5Q12774 1597 aa13.21□□□□□ -0.29
FARP1-205ENST00000457029 CROCC2H7BZ55 1655 aa13.21□□□□□ -0.3
FARP1-205ENST00000457029 ABCC1P33527 1531 aa13.19□□□□□ -0.3
FARP1-205ENST00000457029 SHANK2Q9UPX8 1470 aa13.19□□□□□ -0.3
FARP1-205ENST00000457029 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
FARP1-205ENST00000457029 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
FARP1-205ENST00000457029 CFAP74Q9C0B2 1584 aa13.18□□□□□ -0.3
FARP1-205ENST00000457029 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
FARP1-205ENST00000457029 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
FARP1-205ENST00000457029 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
FARP1-205ENST00000457029 DAPK1P53355 1430 aa13.17□□□□□ -0.3
FARP1-205ENST00000457029 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
FARP1-205ENST00000457029 CEBPAP49715 358 aaPredicted RBP13.17□□□□□ -0.3
FARP1-205ENST00000457029 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
FARP1-205ENST00000457029 ABCC5O15440 1437 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms