RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 RRBP1Q9P2E9 1410 aaKnown RBP25.5■■□□□ 1.67
CCDC90B-202ENST00000455220 CFDP1Q9UEE9 299 aaPredicted RBP25.47■■□□□ 1.67
CCDC90B-202ENST00000455220 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
CCDC90B-202ENST00000455220 TCOF1Q13428 1488 aaKnown RBP25.45■■□□□ 1.66
CCDC90B-202ENST00000455220 PTPN23Q9H3S7 1636 aa25.44■■□□□ 1.66
CCDC90B-202ENST00000455220 PPRC1Q5VV67 1664 aaKnown RBP25.41■■□□□ 1.66
CCDC90B-202ENST00000455220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.41■■□□□ 1.66
CCDC90B-202ENST00000455220 FANCAO15360 1455 aa25.41■■□□□ 1.66
CCDC90B-202ENST00000455220 EFCAB2Q5VUJ9 269 aa25.4■■□□□ 1.66
CCDC90B-202ENST00000455220 SAMD9LQ8IVG5 1584 aa25.4■■□□□ 1.66
CCDC90B-202ENST00000455220 CAMSAP2Q08AD1 1489 aa25.39■■□□□ 1.66
CCDC90B-202ENST00000455220 CFAP74Q9C0B2 1584 aa25.39■■□□□ 1.65
CCDC90B-202ENST00000455220 NEO1Q92859 1461 aa25.37■■□□□ 1.65
CCDC90B-202ENST00000455220 ZNF644Q9H582 1327 aaPredicted RBP25.36■■□□□ 1.65
CCDC90B-202ENST00000455220 TSPOAP1O95153 1857 aa25.36■■□□□ 1.65
CCDC90B-202ENST00000455220 TEX14Q8IWB6 1497 aa25.35■■□□□ 1.65
CCDC90B-202ENST00000455220 ZNF777Q9ULD5 760 aaPredicted RBP25.35■■□□□ 1.65
CCDC90B-202ENST00000455220 PLEKHH2Q8IVE3 1493 aa25.35■■□□□ 1.65
CCDC90B-202ENST00000455220 TRHP20396 242 aaPredicted RBP25.34■■□□□ 1.65
CCDC90B-202ENST00000455220 KIAA1107Q9UPP5 1409 aa25.34■■□□□ 1.65
CCDC90B-202ENST00000455220 ABCC1P33527 1531 aa25.33■■□□□ 1.65
CCDC90B-202ENST00000455220 TRIM26Q12899 539 aaPredicted RBP25.32■■□□□ 1.64
CCDC90B-202ENST00000455220 AKNAQ7Z591 1439 aa25.32■■□□□ 1.64
CCDC90B-202ENST00000455220 FAM50AQ14320 339 aaKnown RBP25.31■■□□□ 1.64
CCDC90B-202ENST00000455220 MBD5Q9P267 1494 aa25.3■■□□□ 1.64
CCDC90B-202ENST00000455220 SYCP2Q9BX26 1530 aa25.29■■□□□ 1.64
CCDC90B-202ENST00000455220 ADGRL1O94910 1474 aa25.29■■□□□ 1.64
CCDC90B-202ENST00000455220 ARHGEF12Q9NZN5 1544 aa25.29■■□□□ 1.64
CCDC90B-202ENST00000455220 ARHGEF5Q12774 1597 aa25.28■■□□□ 1.64
CCDC90B-202ENST00000455220 DNMT1P26358 1616 aaKnown RBP25.27■■□□□ 1.64
CCDC90B-202ENST00000455220 SCAPERQ9BY12 1400 aa25.24■■□□□ 1.63
CCDC90B-202ENST00000455220 HNRNPMP52272 730 aaKnown RBP eCLIP25.22■■□□□ 1.63
CCDC90B-202ENST00000455220 ABCC5O15440 1437 aa25.22■■□□□ 1.63
CCDC90B-202ENST00000455220 DAPK1P53355 1430 aa25.22■■□□□ 1.63
CCDC90B-202ENST00000455220 CCDC141Q6ZP82 1450 aa25.22■■□□□ 1.63
CCDC90B-202ENST00000455220 RSPH4AQ5TD94 716 aa25.22■■□□□ 1.63
CCDC90B-202ENST00000455220 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.63
CCDC90B-202ENST00000455220 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.62
CCDC90B-202ENST00000455220 POGZQ7Z3K3 1410 aa25.18■■□□□ 1.62
CCDC90B-202ENST00000455220 DENND4BO75064 1496 aaPredicted RBP25.18■■□□□ 1.62
CCDC90B-202ENST00000455220 SHANK2Q9UPX8 1470 aa25.18■■□□□ 1.62
CCDC90B-202ENST00000455220 PTPRKQ15262 1439 aa25.18■■□□□ 1.62
CCDC90B-202ENST00000455220 ZNF518AQ6AHZ1 1483 aa25.16■■□□□ 1.62
CCDC90B-202ENST00000455220 KDM5CP41229 1560 aa25.15■■□□□ 1.62
CCDC90B-202ENST00000455220 RICTORQ6R327 1708 aa25.14■■□□□ 1.62
CCDC90B-202ENST00000455220 MAST1Q9Y2H9 1570 aa25.13■■□□□ 1.61
CCDC90B-202ENST00000455220 ITGAEP38570 1179 aa25.13■■□□□ 1.61
CCDC90B-202ENST00000455220 AFAP1Q8N556 730 aa25.12■■□□□ 1.61
CCDC90B-202ENST00000455220 FRMPD1Q5SYB0 1578 aa25.12■■□□□ 1.61
CCDC90B-202ENST00000455220 COL17A1Q9UMD9 1497 aaPredicted RBP25.11■■□□□ 1.61
CCDC90B-202ENST00000455220 C9orf84Q5VXU9 1444 aa25.11■■□□□ 1.61
CCDC90B-202ENST00000455220 TSPY4P0CV99 314 aa25.1■■□□□ 1.61
CCDC90B-202ENST00000455220 TSPY10P0CW01 314 aa25.1■■□□□ 1.61
CCDC90B-202ENST00000455220 ADGRL2O95490 1459 aa25.09■■□□□ 1.61
CCDC90B-202ENST00000455220 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.61
CCDC90B-202ENST00000455220 RAPGEF3O95398 923 aa25.08■■□□□ 1.61
CCDC90B-202ENST00000455220 RTEL1-TNFRSF6BF6WH68 1400 aa25.08■■□□□ 1.6
CCDC90B-202ENST00000455220 INO80Q9ULG1 1556 aaPredicted RBP25.07■■□□□ 1.6
CCDC90B-202ENST00000455220 ROCK1Q13464 1354 aa25.07■■□□□ 1.6
CCDC90B-202ENST00000455220 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
CCDC90B-202ENST00000455220 ZFYVE16Q7Z3T8 1539 aa25.07■■□□□ 1.6
CCDC90B-202ENST00000455220 PCGF6Q9BYE7 350 aa25.06■■□□□ 1.6
CCDC90B-202ENST00000455220 SPAG9O60271 1321 aaKnown RBP25.05■■□□□ 1.6
CCDC90B-202ENST00000455220 MLH3Q9UHC1 1453 aa25.05■■□□□ 1.6
CCDC90B-202ENST00000455220 HECW2Q9P2P5 1572 aa25.04■■□□□ 1.6
CCDC90B-202ENST00000455220 NCOA1Q15788 1441 aa25.04■■□□□ 1.6
CCDC90B-202ENST00000455220 CHIC2Q9UKJ5 165 aa25.04■■□□□ 1.6
CCDC90B-202ENST00000455220 ATP7AQ04656 1500 aa25.04■■□□□ 1.6
CCDC90B-202ENST00000455220 PLXNC1O60486 1568 aa25.03■■□□□ 1.6
CCDC90B-202ENST00000455220 KDM6BO15054 1643 aa25.03■■□□□ 1.6
CCDC90B-202ENST00000455220 KIDINS220Q9ULH0 1771 aa25.02■■□□□ 1.6
CCDC90B-202ENST00000455220 ANKRD30AQ9BXX3 1397 aa25.01■■□□□ 1.59
CCDC90B-202ENST00000455220 HFM1A2PYH4 1435 aa25■■□□□ 1.59
CCDC90B-202ENST00000455220 MAGI2Q86UL8 1455 aa25■■□□□ 1.59
CCDC90B-202ENST00000455220 GCC2Q8IWJ2 1684 aa24.96■■□□□ 1.59
CCDC90B-202ENST00000455220 NAIPQ13075 1403 aa24.96■■□□□ 1.59
CCDC90B-202ENST00000455220 KIF15Q9NS87 1388 aa24.94■■□□□ 1.58
CCDC90B-202ENST00000455220 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
CCDC90B-202ENST00000455220 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
CCDC90B-202ENST00000455220 DIP2CQ9Y2E4 1556 aa24.92■■□□□ 1.58
CCDC90B-202ENST00000455220 YEATS2Q9ULM3 1422 aa24.91■■□□□ 1.58
CCDC90B-202ENST00000455220 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
CCDC90B-202ENST00000455220 SETD5Q9C0A6 1442 aa24.9■■□□□ 1.58
CCDC90B-202ENST00000455220 MYT1LQ9UL68 1186 aa24.9■■□□□ 1.58
CCDC90B-202ENST00000455220 ARHGEF40Q8TER5 1519 aa24.89■■□□□ 1.58
CCDC90B-202ENST00000455220 ANKRD50Q9ULJ7 1429 aa24.87■■□□□ 1.57
CCDC90B-202ENST00000455220 ERBINQ96RT1 1412 aa24.86■■□□□ 1.57
CCDC90B-202ENST00000455220 DHX29Q7Z478 1369 aaKnown RBP24.85■■□□□ 1.57
CCDC90B-202ENST00000455220 A2MP01023 1474 aa24.85■■□□□ 1.57
CCDC90B-202ENST00000455220 REREQ9P2R6 1566 aa24.84■■□□□ 1.57
CCDC90B-202ENST00000455220 ATP10AO60312 1499 aa24.83■■□□□ 1.57
CCDC90B-202ENST00000455220 RAB3GAP2Q9H2M9 1393 aa24.83■■□□□ 1.57
CCDC90B-202ENST00000455220 EIF2AK4Q9P2K8 1649 aaKnown RBP24.81■■□□□ 1.56
CCDC90B-202ENST00000455220 HRCP23327 699 aa24.8■■□□□ 1.56
CCDC90B-202ENST00000455220 BCORL1Q5H9F3 1711 aa24.78■■□□□ 1.56
CCDC90B-202ENST00000455220 AGLP35573 1532 aa24.74■■□□□ 1.55
CCDC90B-202ENST00000455220 ACIN1Q9UKV3 1341 aaKnown RBP24.72■■□□□ 1.55
CCDC90B-202ENST00000455220 SIGLEC1Q9BZZ2 1709 aa24.72■■□□□ 1.55
CCDC90B-202ENST00000455220 DEPDC5O75140 1603 aa24.72■■□□□ 1.55
CCDC90B-202ENST00000455220 UNC13BO14795 1591 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms