RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 NISCHQ9Y2I1 1504 aa39.17■■■■□ 3.86
CCDC90B-202ENST00000455220 CCDC180Q9P1Z9 1646 aa34.53■■■■□ 3.12
CCDC90B-202ENST00000455220 ABCC9O60706 1549 aa33.08■■■□□ 2.89
CCDC90B-202ENST00000455220 ZCCHC6Q5VYS8 1495 aaKnown RBP32.79■■■□□ 2.84
CCDC90B-202ENST00000455220 DCAF1Q9Y4B6 1507 aa32.47■■■□□ 2.79
CCDC90B-202ENST00000455220 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
CCDC90B-202ENST00000455220 DCAF8L2P0C7V8 631 aa32.32■■■□□ 2.77
CCDC90B-202ENST00000455220 NACADO15069 1562 aa32.29■■■□□ 2.76
CCDC90B-202ENST00000455220 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
CCDC90B-202ENST00000455220 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
CCDC90B-202ENST00000455220 UNC13AQ9UPW8 1703 aa31.45■■■□□ 2.62
CCDC90B-202ENST00000455220 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
CCDC90B-202ENST00000455220 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
CCDC90B-202ENST00000455220 PABPN1Q86U42 306 aaKnown RBP eCLIP31■■■□□ 2.55
CCDC90B-202ENST00000455220 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
CCDC90B-202ENST00000455220 BAZ1AQ9NRL2 1556 aaPredicted RBP30.31■■■□□ 2.44
CCDC90B-202ENST00000455220 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
CCDC90B-202ENST00000455220 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
CCDC90B-202ENST00000455220 MROH2BQ7Z745 1585 aa30.19■■■□□ 2.42
CCDC90B-202ENST00000455220 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
CCDC90B-202ENST00000455220 CC2D2AQ9P2K1 1620 aa29.98■■■□□ 2.39
CCDC90B-202ENST00000455220 PEG3Q9GZU2 1588 aa29.97■■■□□ 2.39
CCDC90B-202ENST00000455220 ATAD2BQ9ULI0 1458 aa29.91■■■□□ 2.38
CCDC90B-202ENST00000455220 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
CCDC90B-202ENST00000455220 WIZO95785 1651 aa29.89■■■□□ 2.38
CCDC90B-202ENST00000455220 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
CCDC90B-202ENST00000455220 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
CCDC90B-202ENST00000455220 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.35
CCDC90B-202ENST00000455220 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
CCDC90B-202ENST00000455220 BAZ1BQ9UIG0 1483 aaKnown RBP29.68■■■□□ 2.34
CCDC90B-202ENST00000455220 TOP2AP11388 1531 aaKnown RBP29.63■■■□□ 2.33
CCDC90B-202ENST00000455220 CCDC88BA6NC98 1476 aa29.26■■■□□ 2.28
CCDC90B-202ENST00000455220 CADPSQ9ULU8 1353 aa28.95■■■□□ 2.22
CCDC90B-202ENST00000455220 CFTRP13569 1480 aa28.94■■■□□ 2.22
CCDC90B-202ENST00000455220 LAMC3Q9Y6N6 1575 aa28.89■■■□□ 2.21
CCDC90B-202ENST00000455220 NESP48681 1621 aa28.84■■■□□ 2.21
CCDC90B-202ENST00000455220 PRDM2Q13029 1718 aa28.78■■■□□ 2.2
CCDC90B-202ENST00000455220 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
CCDC90B-202ENST00000455220 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
CCDC90B-202ENST00000455220 KIF21AQ7Z4S6 1674 aa28.53■■■□□ 2.16
CCDC90B-202ENST00000455220 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
CCDC90B-202ENST00000455220 ERCC6Q03468 1493 aa28.45■■■□□ 2.14
CCDC90B-202ENST00000455220 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
CCDC90B-202ENST00000455220 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.13
CCDC90B-202ENST00000455220 MRC2Q9UBG0 1479 aa28.33■■■□□ 2.13
CCDC90B-202ENST00000455220 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
CCDC90B-202ENST00000455220 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
CCDC90B-202ENST00000455220 CUX1P39880 1505 aa28.28■■■□□ 2.12
CCDC90B-202ENST00000455220 DNMBPQ6XZF7 1577 aa28.27■■■□□ 2.12
CCDC90B-202ENST00000455220 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
CCDC90B-202ENST00000455220 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
CCDC90B-202ENST00000455220 WDR62O43379 1518 aa28.23■■■□□ 2.11
CCDC90B-202ENST00000455220 CHIC1Q5VXU3 224 aa28.23■■■□□ 2.11
CCDC90B-202ENST00000455220 TOP2BQ02880 1626 aa28.23■■■□□ 2.11
CCDC90B-202ENST00000455220 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
CCDC90B-202ENST00000455220 TRIM41Q8WV44 630 aa28.1■■■□□ 2.09
CCDC90B-202ENST00000455220 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
CCDC90B-202ENST00000455220 POLA1P09884 1462 aaPredicted RBP28.05■■■□□ 2.08
CCDC90B-202ENST00000455220 CUX2O14529 1486 aa27.97■■■□□ 2.07
CCDC90B-202ENST00000455220 SOGA1O94964 1423 aa27.91■■■□□ 2.06
CCDC90B-202ENST00000455220 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
CCDC90B-202ENST00000455220 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.06
CCDC90B-202ENST00000455220 IFT140Q96RY7 1462 aa27.89■■■□□ 2.05
CCDC90B-202ENST00000455220 ABCA10Q8WWZ4 1543 aa27.85■■■□□ 2.05
CCDC90B-202ENST00000455220 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
CCDC90B-202ENST00000455220 ZNF608Q9ULD9 1512 aaPredicted RBP27.7■■■□□ 2.03
CCDC90B-202ENST00000455220 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
CCDC90B-202ENST00000455220 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
CCDC90B-202ENST00000455220 TDRD9Q8NDG6 1382 aaKnown RBP27.67■■■□□ 2.02
CCDC90B-202ENST00000455220 RUSC2Q8N2Y8 1516 aa27.65■■■□□ 2.02
CCDC90B-202ENST00000455220 EEA1Q15075 1411 aa27.64■■■□□ 2.02
CCDC90B-202ENST00000455220 EIF4G3O43432 1585 aaKnown RBP27.64■■■□□ 2.01
CCDC90B-202ENST00000455220 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.01
CCDC90B-202ENST00000455220 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
CCDC90B-202ENST00000455220 ERICH3Q5RHP9 1530 aa27.53■■■□□ 2
CCDC90B-202ENST00000455220 PBRM1Q86U86 1689 aa27.53■■■□□ 2
CCDC90B-202ENST00000455220 GRIN2BQ13224 1484 aa27.52■■■□□ 2
CCDC90B-202ENST00000455220 IGF1RP08069 1367 aa27.5■■□□□ 1.99
CCDC90B-202ENST00000455220 FAM9AQ8IZU1 332 aaPredicted RBP27.47■■□□□ 1.99
CCDC90B-202ENST00000455220 CSRNP3Q8WYN3 585 aa27.46■■□□□ 1.99
CCDC90B-202ENST00000455220 CUL7Q14999 1698 aa27.41■■□□□ 1.98
CCDC90B-202ENST00000455220 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
CCDC90B-202ENST00000455220 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.97
CCDC90B-202ENST00000455220 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
CCDC90B-202ENST00000455220 ADAMTS12P58397 1594 aa27.37■■□□□ 1.97
CCDC90B-202ENST00000455220 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
CCDC90B-202ENST00000455220 DNAJC5Q9H3Z4 198 aa27.34■■□□□ 1.97
CCDC90B-202ENST00000455220 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
CCDC90B-202ENST00000455220 KIF21BO75037 1637 aa27.31■■□□□ 1.96
CCDC90B-202ENST00000455220 SYNJ2O15056 1496 aa27.27■■□□□ 1.96
CCDC90B-202ENST00000455220 RAPGEF2Q9Y4G8 1499 aa27.27■■□□□ 1.96
CCDC90B-202ENST00000455220 GOLGA3Q08378 1498 aa27.18■■□□□ 1.94
CCDC90B-202ENST00000455220 GRIN2AQ12879 1464 aa27.18■■□□□ 1.94
CCDC90B-202ENST00000455220 CHMP7Q8WUX9 453 aaPredicted RBP27.15■■□□□ 1.94
CCDC90B-202ENST00000455220 CHD1O14646 1710 aa27.14■■□□□ 1.94
CCDC90B-202ENST00000455220 FBLN2P98095 1184 aa27.09■■□□□ 1.93
CCDC90B-202ENST00000455220 NUP160Q12769 1436 aa27.05■■□□□ 1.92
CCDC90B-202ENST00000455220 LOC105371045A0A1W2PR82 267 aa27.04■■□□□ 1.92
CCDC90B-202ENST00000455220 EHMT2Q96KQ7 1210 aa27.03■■□□□ 1.92
CCDC90B-202ENST00000455220 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms