RNA–Protein interactions for RNA: ENST00000454936.5

HDAC10-206, Transcript of histone deacetylase 10, humanhuman

TSL 2

Gene HDAC10, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-206ENST00000454936 GPATCH8Q9UKJ3 1502 aaKnown RBP26.57■■□□□ 1.84
HDAC10-206ENST00000454936 CFDP1Q9UEE9 299 aaPredicted RBP26.53■■□□□ 1.84
HDAC10-206ENST00000454936 ITSN2Q9NZM3 1697 aa26.52■■□□□ 1.84
HDAC10-206ENST00000454936 EFCAB2Q5VUJ9 269 aa26.52■■□□□ 1.84
HDAC10-206ENST00000454936 KDM6BO15054 1643 aa26.51■■□□□ 1.84
HDAC10-206ENST00000454936 CFAP74Q9C0B2 1584 aa26.5■■□□□ 1.83
HDAC10-206ENST00000454936 PCGF6Q9BYE7 350 aa26.5■■□□□ 1.83
HDAC10-206ENST00000454936 AKNAQ7Z591 1439 aa26.5■■□□□ 1.83
HDAC10-206ENST00000454936 NEO1Q92859 1461 aa26.49■■□□□ 1.83
HDAC10-206ENST00000454936 PHLDB1Q86UU1 1377 aa26.49■■□□□ 1.83
HDAC10-206ENST00000454936 ARAP3Q8WWN8 1544 aa26.49■■□□□ 1.83
HDAC10-206ENST00000454936 COL17A1Q9UMD9 1497 aaPredicted RBP26.47■■□□□ 1.83
HDAC10-206ENST00000454936 ADGRL1O94910 1474 aa26.47■■□□□ 1.83
HDAC10-206ENST00000454936 ZNF644Q9H582 1327 aaPredicted RBP26.45■■□□□ 1.82
HDAC10-206ENST00000454936 SAMD9LQ8IVG5 1584 aa26.44■■□□□ 1.82
HDAC10-206ENST00000454936 MYOM3Q5VTT5 1437 aa26.44■■□□□ 1.82
HDAC10-206ENST00000454936 RAPGEF3O95398 923 aa26.43■■□□□ 1.82
HDAC10-206ENST00000454936 SCAPERQ9BY12 1400 aa26.42■■□□□ 1.82
HDAC10-206ENST00000454936 TRIM26Q12899 539 aaPredicted RBP26.4■■□□□ 1.82
HDAC10-206ENST00000454936 ABCC1P33527 1531 aa26.38■■□□□ 1.81
HDAC10-206ENST00000454936 SYCP2Q9BX26 1530 aa26.38■■□□□ 1.81
HDAC10-206ENST00000454936 HNRNPMP52272 730 aaKnown RBP eCLIP26.37■■□□□ 1.81
HDAC10-206ENST00000454936 DENND4BO75064 1496 aaPredicted RBP26.37■■□□□ 1.81
HDAC10-206ENST00000454936 CAMSAP2Q08AD1 1489 aa26.37■■□□□ 1.81
HDAC10-206ENST00000454936 ARHGEF12Q9NZN5 1544 aa26.36■■□□□ 1.81
HDAC10-206ENST00000454936 FGD6Q6ZV73 1430 aa26.34■■□□□ 1.81
HDAC10-206ENST00000454936 RICTORQ6R327 1708 aa26.33■■□□□ 1.81
HDAC10-206ENST00000454936 AFAP1Q8N556 730 aa26.33■■□□□ 1.81
HDAC10-206ENST00000454936 FRMPD1Q5SYB0 1578 aa26.33■■□□□ 1.8
HDAC10-206ENST00000454936 PTPN23Q9H3S7 1636 aa26.32■■□□□ 1.8
HDAC10-206ENST00000454936 POGZQ7Z3K3 1410 aa26.31■■□□□ 1.8
HDAC10-206ENST00000454936 MIA2Q96PC5 1412 aa26.31■■□□□ 1.8
HDAC10-206ENST00000454936 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
HDAC10-206ENST00000454936 MYT1LQ9UL68 1186 aa26.3■■□□□ 1.8
HDAC10-206ENST00000454936 FAM50AQ14320 339 aaKnown RBP26.29■■□□□ 1.8
HDAC10-206ENST00000454936 PLEKHH2Q8IVE3 1493 aa26.28■■□□□ 1.8
HDAC10-206ENST00000454936 ZNF518AQ6AHZ1 1483 aa26.27■■□□□ 1.8
HDAC10-206ENST00000454936 KIAA1107Q9UPP5 1409 aa26.25■■□□□ 1.79
HDAC10-206ENST00000454936 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
HDAC10-206ENST00000454936 HRCP23327 699 aa26.21■■□□□ 1.79
HDAC10-206ENST00000454936 TCOF1Q13428 1488 aaKnown RBP26.19■■□□□ 1.78
HDAC10-206ENST00000454936 KDM5CP41229 1560 aa26.19■■□□□ 1.78
HDAC10-206ENST00000454936 CCDC141Q6ZP82 1450 aa26.18■■□□□ 1.78
HDAC10-206ENST00000454936 HECW2Q9P2P5 1572 aa26.17■■□□□ 1.78
HDAC10-206ENST00000454936 ZMYM4Q5VZL5 1548 aa26.17■■□□□ 1.78
HDAC10-206ENST00000454936 YEATS2Q9ULM3 1422 aa26.17■■□□□ 1.78
HDAC10-206ENST00000454936 SPAG9O60271 1321 aaKnown RBP26.17■■□□□ 1.78
HDAC10-206ENST00000454936 ITGAEP38570 1179 aa26.17■■□□□ 1.78
HDAC10-206ENST00000454936 ARHGEF5Q12774 1597 aa26.15■■□□□ 1.78
HDAC10-206ENST00000454936 ZFYVE16Q7Z3T8 1539 aa26.14■■□□□ 1.78
HDAC10-206ENST00000454936 TSPY4P0CV99 314 aa26.12■■□□□ 1.77
HDAC10-206ENST00000454936 TSPY10P0CW01 314 aa26.12■■□□□ 1.77
HDAC10-206ENST00000454936 KIDINS220Q9ULH0 1771 aa26.12■■□□□ 1.77
HDAC10-206ENST00000454936 DNMT1P26358 1616 aaKnown RBP26.11■■□□□ 1.77
HDAC10-206ENST00000454936 RRBP1Q9P2E9 1410 aaKnown RBP26.11■■□□□ 1.77
HDAC10-206ENST00000454936 CHIC2Q9UKJ5 165 aa26.11■■□□□ 1.77
HDAC10-206ENST00000454936 DAPK1P53355 1430 aa26.1■■□□□ 1.77
HDAC10-206ENST00000454936 ATP7AQ04656 1500 aa26.1■■□□□ 1.77
HDAC10-206ENST00000454936 ARHGEF40Q8TER5 1519 aa26.1■■□□□ 1.77
HDAC10-206ENST00000454936 RSPH4AQ5TD94 716 aa26.1■■□□□ 1.77
HDAC10-206ENST00000454936 ABCC5O15440 1437 aa26.1■■□□□ 1.77
HDAC10-206ENST00000454936 CROCC2H7BZ55 1655 aa26.09■■□□□ 1.77
HDAC10-206ENST00000454936 INO80Q9ULG1 1556 aaPredicted RBP26.09■■□□□ 1.77
HDAC10-206ENST00000454936 MLH3Q9UHC1 1453 aa26.09■■□□□ 1.77
HDAC10-206ENST00000454936 ABCA6Q8N139 1617 aa26.09■■□□□ 1.77
HDAC10-206ENST00000454936 MAGI2Q86UL8 1455 aa26.08■■□□□ 1.77
HDAC10-206ENST00000454936 C9orf84Q5VXU9 1444 aa26.07■■□□□ 1.76
HDAC10-206ENST00000454936 DIP2CQ9Y2E4 1556 aa26.05■■□□□ 1.76
HDAC10-206ENST00000454936 ARID4BQ4LE39 1312 aaPredicted RBP26.02■■□□□ 1.76
HDAC10-206ENST00000454936 PTPRKQ15262 1439 aa26■■□□□ 1.75
HDAC10-206ENST00000454936 SIGLEC1Q9BZZ2 1709 aa26■■□□□ 1.75
HDAC10-206ENST00000454936 ATP10AO60312 1499 aa26■■□□□ 1.75
HDAC10-206ENST00000454936 RTEL1-TNFRSF6BF6WH68 1400 aa25.99■■□□□ 1.75
HDAC10-206ENST00000454936 MAST1Q9Y2H9 1570 aa25.99■■□□□ 1.75
HDAC10-206ENST00000454936 SHANK2Q9UPX8 1470 aa25.99■■□□□ 1.75
HDAC10-206ENST00000454936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.99■■□□□ 1.75
HDAC10-206ENST00000454936 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
HDAC10-206ENST00000454936 ADGBQ8N7X0 1667 aa25.98■■□□□ 1.75
HDAC10-206ENST00000454936 MLECQ14165 292 aa25.94■■□□□ 1.74
HDAC10-206ENST00000454936 A2MP01023 1474 aa25.93■■□□□ 1.74
HDAC10-206ENST00000454936 PLXNC1O60486 1568 aa25.92■■□□□ 1.74
HDAC10-206ENST00000454936 KIF15Q9NS87 1388 aa25.92■■□□□ 1.74
HDAC10-206ENST00000454936 ANKRD30AQ9BXX3 1397 aa25.91■■□□□ 1.74
HDAC10-206ENST00000454936 NCOA1Q15788 1441 aa25.89■■□□□ 1.73
HDAC10-206ENST00000454936 ADGRL2O95490 1459 aa25.86■■□□□ 1.73
HDAC10-206ENST00000454936 REREQ9P2R6 1566 aa25.86■■□□□ 1.73
HDAC10-206ENST00000454936 DHX29Q7Z478 1369 aaKnown RBP25.86■■□□□ 1.73
HDAC10-206ENST00000454936 DUOX2Q9NRD8 1548 aa25.83■■□□□ 1.73
HDAC10-206ENST00000454936 KIF3BO15066 747 aa25.83■■□□□ 1.73
HDAC10-206ENST00000454936 GGT6Q6P531 493 aa25.82■■□□□ 1.72
HDAC10-206ENST00000454936 BCORL1Q5H9F3 1711 aa25.8■■□□□ 1.72
HDAC10-206ENST00000454936 ROCK1Q13464 1354 aa25.8■■□□□ 1.72
HDAC10-206ENST00000454936 AGLP35573 1532 aa25.79■■□□□ 1.72
HDAC10-206ENST00000454936 ANKRD50Q9ULJ7 1429 aa25.76■■□□□ 1.71
HDAC10-206ENST00000454936 ERBINQ96RT1 1412 aa25.75■■□□□ 1.71
HDAC10-206ENST00000454936 KDM4FA0A1W2PPD8 638 aa25.75■■□□□ 1.71
HDAC10-206ENST00000454936 MADDQ8WXG6 1647 aa25.73■■□□□ 1.71
HDAC10-206ENST00000454936 PLPPR3Q6T4P5 718 aa25.73■■□□□ 1.71
HDAC10-206ENST00000454936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.73■■□□□ 1.713e-7■■□□□ 14.4
HDAC10-206ENST00000454936 EIF2AK4Q9P2K8 1649 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms