RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 HMGXB3Q12766 1538 aa4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 AKNAQ7Z591 1439 aa4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 NCOA2Q15596 1464 aa4.69□□□□□ -1.66
AC006539.3-201ENST00000454258 ARHGAP35Q9NRY4 1499 aa4.69□□□□□ -1.66
AC006539.3-201ENST00000454258 DEKP35659 375 aaKnown RBP4.69□□□□□ -1.66
AC006539.3-201ENST00000454258 PPM1GO15355 546 aaPredicted RBP4.68□□□□□ -1.66
AC006539.3-201ENST00000454258 UACAQ9BZF9 1416 aa4.68□□□□□ -1.66
AC006539.3-201ENST00000454258 ZBED9Q6R2W3 1325 aa4.68□□□□□ -1.66
AC006539.3-201ENST00000454258 NCAPD3P42695 1498 aa4.68□□□□□ -1.66
AC006539.3-201ENST00000454258 LRRC9Q6ZRR7 1453 aa4.68□□□□□ -1.66
AC006539.3-201ENST00000454258 HECW1Q76N89 1606 aa4.68□□□□□ -1.66
AC006539.3-201ENST00000454258 RUSC2Q8N2Y8 1516 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 KTN1Q86UP2 1357 aaKnown RBP4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 HFM1A2PYH4 1435 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 SPDYE2BA6NHP3 402 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 PPP1R15AO75807 674 aaPredicted RBP4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 SPDYE6P0CI01 402 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 SPDYE2Q495Y8 402 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 DDRGK1Q96HY6 314 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 SSUH2Q9Y2M2 353 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 WDR97A6NE52 1622 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 ERCC6Q03468 1493 aa4.67□□□□□ -1.66
AC006539.3-201ENST00000454258 CNTLNQ9NXG0 1405 aa4.66□□□□□ -1.66
AC006539.3-201ENST00000454258 C11orf95C9JLR9 678 aaPredicted RBP4.66□□□□□ -1.66
AC006539.3-201ENST00000454258 CHGAP10645 457 aaKnown RBP4.66□□□□□ -1.66
AC006539.3-201ENST00000454258 UBE2Q2Q8WVN8 375 aa4.66□□□□□ -1.66
AC006539.3-201ENST00000454258 GCC2Q8IWJ2 1684 aa4.66□□□□□ -1.66
AC006539.3-201ENST00000454258 ARID4BQ4LE39 1312 aaPredicted RBP4.66□□□□□ -1.66
AC006539.3-201ENST00000454258 ZMYM4Q5VZL5 1548 aa4.66□□□□□ -1.66
AC006539.3-201ENST00000454258 OSCARQ8IYS5 282 aa4.65□□□□□ -1.67
AC006539.3-201ENST00000454258 IPO9Q96P70 1041 aaKnown RBP4.65□□□□□ -1.67
AC006539.3-201ENST00000454258 CIZ1Q9ULV3 898 aaPredicted RBP4.65□□□□□ -1.67
AC006539.3-201ENST00000454258 FMN1Q68DA7 1419 aa4.64□□□□□ -1.67
AC006539.3-201ENST00000454258 SMG6Q86US8 1419 aaKnown RBP4.64□□□□□ -1.67
AC006539.3-201ENST00000454258 CUL7Q14999 1698 aa4.64□□□□□ -1.67
AC006539.3-201ENST00000454258 ATAD2BQ9ULI0 1458 aa4.64□□□□□ -1.67
AC006539.3-201ENST00000454258 RSPH6AQ9H0K4 717 aa4.64□□□□□ -1.67
AC006539.3-201ENST00000454258 ZBTB47Q9UFB7 747 aaPredicted RBP4.64□□□□□ -1.67
AC006539.3-201ENST00000454258 ROCK2O75116 1388 aaKnown RBP4.64□□□□□ -1.67
AC006539.3-201ENST00000454258 MIA2Q96PC5 1412 aa4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 PLEKHH2Q8IVE3 1493 aa4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 EHBP1L1Q8N3D4 1523 aa4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 PLEKHG5O94827 1062 aa4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 MS4A1P11836 297 aa4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 RANGAP1P46060 587 aaPredicted RBP4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 HNRNPUQ00839 825 aaKnown RBP eCLIP4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 PTPN23Q9H3S7 1636 aa4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 INSRP06213 1382 aa4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 CASKIN1Q8WXD9 1431 aa4.63□□□□□ -1.67
AC006539.3-201ENST00000454258 PCF11O94913 1555 aaKnown RBP4.62□□□□□ -1.67
AC006539.3-201ENST00000454258 TCERG1O14776 1098 aaKnown RBP4.62□□□□□ -1.67
AC006539.3-201ENST00000454258 DDX10Q13206 875 aaKnown RBP4.62□□□□□ -1.67
AC006539.3-201ENST00000454258 SUPT6HQ7KZ85 1726 aaKnown RBP4.62□□□□□ -1.67
AC006539.3-201ENST00000454258 CCDC144AA2RUR9 1427 aa4.62□□□□□ -1.67
AC006539.3-201ENST00000454258 PDS5BQ9NTI5 1447 aa4.62□□□□□ -1.67
AC006539.3-201ENST00000454258 FGD5Q6ZNL6 1462 aa4.62□□□□□ -1.67
AC006539.3-201ENST00000454258 CTTNBP2Q8WZ74 1663 aa4.61□□□□□ -1.67
AC006539.3-201ENST00000454258 DSG3P32926 999 aa4.61□□□□□ -1.67
AC006539.3-201ENST00000454258 PHLDB1Q86UU1 1377 aa4.61□□□□□ -1.67
AC006539.3-201ENST00000454258 FGD6Q6ZV73 1430 aa4.61□□□□□ -1.67
AC006539.3-201ENST00000454258 HS6ST3Q8IZP7 471 aa4.6□□□□□ -1.67
AC006539.3-201ENST00000454258 TRIM52Q96A61 297 aa4.6□□□□□ -1.67
AC006539.3-201ENST00000454258 CCDC136Q96JN2 1154 aa4.6□□□□□ -1.67
AC006539.3-201ENST00000454258 WASHC2AQ641Q2 1341 aa4.6□□□□□ -1.67
AC006539.3-201ENST00000454258 NCOA1Q15788 1441 aa4.6□□□□□ -1.67
AC006539.3-201ENST00000454258 CFTRP13569 1480 aa4.59□□□□□ -1.67
AC006539.3-201ENST00000454258 BRPF1P55201 1214 aaPredicted RBP4.59□□□□□ -1.67
AC006539.3-201ENST00000454258 EIF4G2P78344 907 aaKnown RBP eCLIP4.59□□□□□ -1.67
AC006539.3-201ENST00000454258 MYOM3Q5VTT5 1437 aa4.59□□□□□ -1.67
AC006539.3-201ENST00000454258 RNF123Q5XPI4 1314 aa4.59□□□□□ -1.67
AC006539.3-201ENST00000454258 NPM2Q86SE8 214 aaKnown RBP4.59□□□□□ -1.67
AC006539.3-201ENST00000454258 WASHC2CQ9Y4E1 1318 aa4.59□□□□□ -1.67
AC006539.3-201ENST00000454258 LAMC3Q9Y6N6 1575 aa4.58□□□□□ -1.68
AC006539.3-201ENST00000454258 TCOF1Q13428 1488 aaKnown RBP4.58□□□□□ -1.68
AC006539.3-201ENST00000454258 NEFMP07197 916 aa4.58□□□□□ -1.68
AC006539.3-201ENST00000454258 PDE3BQ13370 1112 aa4.58□□□□□ -1.68
AC006539.3-201ENST00000454258 FAM43AQ8N2R8 423 aa4.58□□□□□ -1.68
AC006539.3-201ENST00000454258 NUDCQ9Y266 331 aa4.58□□□□□ -1.68
AC006539.3-201ENST00000454258 KIF14Q15058 1648 aa4.57□□□□□ -1.68
AC006539.3-201ENST00000454258 ITGAEP38570 1179 aa4.57□□□□□ -1.68
AC006539.3-201ENST00000454258 ISY1Q9ULR0 285 aaKnown RBP4.57□□□□□ -1.68
AC006539.3-201ENST00000454258 ARHGEF12Q9NZN5 1544 aa4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 ROCK1Q13464 1354 aa4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 EIF3AQ14152 1382 aaKnown RBP4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 ZMYM3Q14202 1370 aa4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 GSE1Q14687 1217 aa4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 NKX1-1Q15270 411 aaPredicted RBP4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 L1TD1Q5T7N2 865 aaKnown RBP4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 KANK4Q5T7N3 995 aaPredicted RBP4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 RNF25Q96BH1 459 aaPredicted RBP4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 SAMD9Q5K651 1589 aa4.56□□□□□ -1.68
AC006539.3-201ENST00000454258 NAIPQ13075 1403 aa4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 MTUS2Q5JR59 1369 aa4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 CCDC7Q96M83 1385 aa4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 CADPSQ9ULU8 1353 aa4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 FAM50AQ14320 339 aaKnown RBP4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 PRKRIP1Q9H875 184 aaPredicted RBP4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 MRS2Q9HD23 443 aa4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 ARHGEF11O15085 1522 aa4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 KDM5BQ9UGL1 1544 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms