RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 CHIC1Q5VXU3 224 aa7.97□□□□□ -1.13
AC006539.3-201ENST00000454258 AEBP2Q6ZN18 517 aaPredicted RBP7.83□□□□□ -1.16
AC006539.3-201ENST00000454258 PHF23Q9BUL5 403 aaPredicted RBP7.05□□□□□ -1.28
AC006539.3-201ENST00000454258 PLPPR3Q6T4P5 718 aa6.62□□□□□ -1.35
AC006539.3-201ENST00000454258 SENP3Q9H4L4 574 aaPredicted RBP6.6□□□□□ -1.35
AC006539.3-201ENST00000454258 NISCHQ9Y2I1 1504 aa6.43□□□□□ -1.38
AC006539.3-201ENST00000454258 ADRA2BP18089 450 aa6.19□□□□□ -1.42
AC006539.3-201ENST00000454258 EHMT2Q96KQ7 1210 aa6.14□□□□□ -1.43
AC006539.3-201ENST00000454258 KCNA4P22459 653 aa6.12□□□□□ -1.43
AC006539.3-201ENST00000454258 PPP6R1Q9UPN7 881 aa6.11□□□□□ -1.43
AC006539.3-201ENST00000454258 FOXD1Q16676 465 aa6.08□□□□□ -1.44
AC006539.3-201ENST00000454258 SLC24A1O60721 1099 aa6.03□□□□□ -1.44
AC006539.3-201ENST00000454258 CSRNP3Q8WYN3 585 aa5.92□□□□□ -1.46
AC006539.3-201ENST00000454258 PELP1Q8IZL8 1130 aaKnown RBP5.88□□□□□ -1.47
AC006539.3-201ENST00000454258 SLC4A1APQ9BWU0 796 aaKnown RBP5.88□□□□□ -1.47
AC006539.3-201ENST00000454258 PPP4R3CPQ6ZMV5 832 aa5.87□□□□□ -1.47
AC006539.3-201ENST00000454258 NCBP3Q53F19 620 aaKnown RBP5.82□□□□□ -1.48
AC006539.3-201ENST00000454258 PIAS4Q8N2W9 510 aaPredicted RBP5.82□□□□□ -1.48
AC006539.3-201ENST00000454258 MYT1Q01538 1121 aa5.8□□□□□ -1.48
AC006539.3-201ENST00000454258 RTN4Q9NQC3 1192 aaKnown RBP5.76□□□□□ -1.49
AC006539.3-201ENST00000454258 NPM3O75607 178 aaKnown RBP5.73□□□□□ -1.49
AC006539.3-201ENST00000454258 HRCP23327 699 aa5.67□□□□□ -1.5
AC006539.3-201ENST00000454258 ZBTB22O15209 634 aa5.63□□□□□ -1.51
AC006539.3-201ENST00000454258 AMER1Q5JTC6 1135 aaPredicted RBP5.63□□□□□ -1.51
AC006539.3-201ENST00000454258 CNKSR2Q8WXI2 1034 aa5.63□□□□□ -1.51
AC006539.3-201ENST00000454258 DCAF1Q9Y4B6 1507 aa5.62□□□□□ -1.51
AC006539.3-201ENST00000454258 SCAF1Q9H7N4 1312 aaKnown RBP5.6□□□□□ -1.51
AC006539.3-201ENST00000454258 CCDC180Q9P1Z9 1646 aa5.59□□□□□ -1.52
AC006539.3-201ENST00000454258 ZEB1P37275 1124 aaPredicted RBP5.58□□□□□ -1.52
AC006539.3-201ENST00000454258 ZCCHC6Q5VYS8 1495 aaKnown RBP5.53□□□□□ -1.52
AC006539.3-201ENST00000454258 FOXD4L1Q9NU39 408 aa5.53□□□□□ -1.52
AC006539.3-201ENST00000454258 TTBK1Q5TCY1 1321 aaPredicted RBP5.51□□□□□ -1.53
AC006539.3-201ENST00000454258 DNAJC5BQ9UF47 199 aa5.51□□□□□ -1.53
AC006539.3-201ENST00000454258 MSH5O43196 834 aa5.48□□□□□ -1.53
AC006539.3-201ENST00000454258 MAPK8IP2Q13387 824 aaPredicted RBP5.46□□□□□ -1.54
AC006539.3-201ENST00000454258 RNF216Q9NWF9 866 aaPredicted RBP5.44□□□□□ -1.54
AC006539.3-201ENST00000454258 TRIM26Q12899 539 aaPredicted RBP5.42□□□□□ -1.54
AC006539.3-201ENST00000454258 PCGF6Q9BYE7 350 aa5.39□□□□□ -1.55
AC006539.3-201ENST00000454258 CENPBP07199 599 aaPredicted RBP5.37□□□□□ -1.55
AC006539.3-201ENST00000454258 MYO15BQ96JP2 1530 aa5.37□□□□□ -1.55
AC006539.3-201ENST00000454258 SUPT5HO00267 1087 aaKnown RBP5.36□□□□□ -1.55
AC006539.3-201ENST00000454258 CLSPNQ9HAW4 1339 aa5.36□□□□□ -1.55
AC006539.3-201ENST00000454258 PRKCSHP14314 528 aaPredicted RBP5.35□□□□□ -1.55
AC006539.3-201ENST00000454258 SLC4A2P04920 1241 aa5.34□□□□□ -1.55
AC006539.3-201ENST00000454258 HOXD11P31277 338 aaPredicted RBP5.33□□□□□ -1.56
AC006539.3-201ENST00000454258 SHROOM4Q9ULL8 1493 aa5.32□□□□□ -1.56
AC006539.3-201ENST00000454258 DMRT2Q9Y5R5 561 aa5.32□□□□□ -1.56
AC006539.3-201ENST00000454258 ATXN8OSP0DMR3 200 aa5.31□□□□□ -1.56
AC006539.3-201ENST00000454258 ABCC9O60706 1549 aa5.31□□□□□ -1.56
AC006539.3-201ENST00000454258 MYCNP04198 464 aaPredicted RBP5.29□□□□□ -1.56
AC006539.3-201ENST00000454258 FKBP8Q14318 412 aa5.29□□□□□ -1.56
AC006539.3-201ENST00000454258 ACIN1Q9UKV3 1341 aaKnown RBP5.24□□□□□ -1.57
AC006539.3-201ENST00000454258 PPARGC1BQ86YN6 1023 aaKnown RBP5.23□□□□□ -1.57
AC006539.3-201ENST00000454258 PLCB2Q00722 1185 aa5.22□□□□□ -1.57
AC006539.3-201ENST00000454258 TAOK2Q9UL54 1235 aa5.22□□□□□ -1.57
AC006539.3-201ENST00000454258 RB1CC1Q8TDY2 1594 aa5.21□□□□□ -1.57
AC006539.3-201ENST00000454258 DAXXQ9UER7 740 aaPredicted RBP5.18□□□□□ -1.58
AC006539.3-201ENST00000454258 WRNQ14191 1432 aaPredicted RBP eCLIP5.16□□□□□ -1.58
AC006539.3-201ENST00000454258 BCANQ96GW7 911 aa5.16□□□□□ -1.58
AC006539.3-201ENST00000454258 EEA1Q15075 1411 aa5.14□□□□□ -1.59
AC006539.3-201ENST00000454258 DIEXFQ68CQ4 756 aaKnown RBP5.13□□□□□ -1.59
AC006539.3-201ENST00000454258 TRIM41Q8WV44 630 aa5.12□□□□□ -1.59
AC006539.3-201ENST00000454258 TIMELESSQ9UNS1 1208 aa5.12□□□□□ -1.59
AC006539.3-201ENST00000454258 ATF5Q9Y2D1 282 aaPredicted RBP5.12□□□□□ -1.59
AC006539.3-201ENST00000454258 GTF3C3Q9Y5Q9 886 aa5.12□□□□□ -1.59
AC006539.3-201ENST00000454258 CCER1Q8TC90 406 aaPredicted RBP5.11□□□□□ -1.59
AC006539.3-201ENST00000454258 MYT1LQ9UL68 1186 aa5.11□□□□□ -1.59
AC006539.3-201ENST00000454258 HAP1P54257 671 aaPredicted RBP5.1□□□□□ -1.59
AC006539.3-201ENST00000454258 TPRNQ4KMQ1 711 aa5.1□□□□□ -1.59
AC006539.3-201ENST00000454258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.1□□□□□ -1.59
AC006539.3-201ENST00000454258 NACADO15069 1562 aa5.09□□□□□ -1.59
AC006539.3-201ENST00000454258 RSF1Q96T23 1441 aaPredicted RBP5.09□□□□□ -1.59
AC006539.3-201ENST00000454258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.09□□□□□ -1.59
AC006539.3-201ENST00000454258 NEUROD1Q13562 356 aa5.09□□□□□ -1.59
AC006539.3-201ENST00000454258 HNRNPUL2Q1KMD3 747 aaKnown RBP5.09□□□□□ -1.59
AC006539.3-201ENST00000454258 SAMD1Q6SPF0 538 aaPredicted RBP5.09□□□□□ -1.59
AC006539.3-201ENST00000454258 DCAF8L1A6NGE4 600 aa5.08□□□□□ -1.6
AC006539.3-201ENST00000454258 DCAF8L2P0C7V8 631 aa5.07□□□□□ -1.6
AC006539.3-201ENST00000454258 BAZ1AQ9NRL2 1556 aaPredicted RBP5.07□□□□□ -1.6
AC006539.3-201ENST00000454258 LOC105371045A0A1W2PR82 267 aa5.06□□□□□ -1.6
AC006539.3-201ENST00000454258 ZNF316A6NFI3 1004 aaPredicted RBP5.06□□□□□ -1.6
AC006539.3-201ENST00000454258 VSIG10Q8N0Z9 540 aa5.06□□□□□ -1.6
AC006539.3-201ENST00000454258 KDM2AQ9Y2K7 1162 aa5.06□□□□□ -1.6
AC006539.3-201ENST00000454258 ERICH6Q7L0X2 663 aa5.05□□□□□ -1.6
AC006539.3-201ENST00000454258 ARXQ96QS3 562 aa5.05□□□□□ -1.6
AC006539.3-201ENST00000454258 U3KPZ7 1027 aaPredicted RBP5.04□□□□□ -1.6
AC006539.3-201ENST00000454258 EIF4G1Q04637 1599 aaKnown RBP5.04□□□□□ -1.6
AC006539.3-201ENST00000454258 TULP1O00294 542 aaPredicted RBP5.03□□□□□ -1.6
AC006539.3-201ENST00000454258 TNIKQ9UKE5 1360 aa5.03□□□□□ -1.6
AC006539.3-201ENST00000454258 ANP32EQ9BTT0 268 aa5.02□□□□□ -1.61
AC006539.3-201ENST00000454258 GOLGA3Q08378 1498 aa5.01□□□□□ -1.61
AC006539.3-201ENST00000454258 CEP162Q5TB80 1403 aa5.01□□□□□ -1.61
AC006539.3-201ENST00000454258 ZNF219Q9P2Y4 722 aaPredicted RBP5.01□□□□□ -1.61
AC006539.3-201ENST00000454258 FBXO3Q9UK99 471 aa5.01□□□□□ -1.61
AC006539.3-201ENST00000454258 BAZ1BQ9UIG0 1483 aaKnown RBP5□□□□□ -1.61
AC006539.3-201ENST00000454258 KIF21BO75037 1637 aa4.99□□□□□ -1.61
AC006539.3-201ENST00000454258 SCRIBQ14160 1630 aa4.99□□□□□ -1.61
AC006539.3-201ENST00000454258 FBLN2P98095 1184 aa4.99□□□□□ -1.61
AC006539.3-201ENST00000454258 TOP2AP11388 1531 aaKnown RBP4.98□□□□□ -1.61
AC006539.3-201ENST00000454258 CEP164Q9UPV0 1460 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms