RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 GPATCH8Q9UKJ3 1502 aaKnown RBP24.47■■□□□ 1.51
RBM39-219ENST00000453310 CCNB3Q8WWL7 1395 aa24.47■■□□□ 1.51
RBM39-219ENST00000453310 ITSN2Q9NZM3 1697 aa24.45■■□□□ 1.5
RBM39-219ENST00000453310 KDM6BO15054 1643 aa24.45■■□□□ 1.5
RBM39-219ENST00000453310 PHLDB1Q86UU1 1377 aa24.43■■□□□ 1.5
RBM39-219ENST00000453310 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
RBM39-219ENST00000453310 AKNAQ7Z591 1439 aa24.42■■□□□ 1.5
RBM39-219ENST00000453310 COL17A1Q9UMD9 1497 aaPredicted RBP24.38■■□□□ 1.49
RBM39-219ENST00000453310 CFDP1Q9UEE9 299 aaPredicted RBP24.37■■□□□ 1.49
RBM39-219ENST00000453310 ADGRL1O94910 1474 aa24.37■■□□□ 1.49
RBM39-219ENST00000453310 SAMD9LQ8IVG5 1584 aa24.35■■□□□ 1.49
RBM39-219ENST00000453310 ABCC1P33527 1531 aa24.34■■□□□ 1.49
RBM39-219ENST00000453310 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
RBM39-219ENST00000453310 PPARGC1BQ86YN6 1023 aaKnown RBP24.32■■□□□ 1.48
RBM39-219ENST00000453310 ZNF777Q9ULD5 760 aaPredicted RBP24.32■■□□□ 1.48
RBM39-219ENST00000453310 SCAPERQ9BY12 1400 aa24.31■■□□□ 1.48
RBM39-219ENST00000453310 DENND4BO75064 1496 aaPredicted RBP24.31■■□□□ 1.48
RBM39-219ENST00000453310 RICTORQ6R327 1708 aa24.3■■□□□ 1.48
RBM39-219ENST00000453310 FRMPD1Q5SYB0 1578 aa24.29■■□□□ 1.48
RBM39-219ENST00000453310 MIA2Q96PC5 1412 aa24.28■■□□□ 1.48
RBM39-219ENST00000453310 PLEKHH2Q8IVE3 1493 aa24.28■■□□□ 1.48
RBM39-219ENST00000453310 POGZQ7Z3K3 1410 aa24.27■■□□□ 1.48
RBM39-219ENST00000453310 SYCP2Q9BX26 1530 aa24.27■■□□□ 1.48
RBM39-219ENST00000453310 CAMSAP2Q08AD1 1489 aa24.26■■□□□ 1.47
RBM39-219ENST00000453310 ARHGEF12Q9NZN5 1544 aa24.26■■□□□ 1.47
RBM39-219ENST00000453310 RAPGEF3O95398 923 aa24.26■■□□□ 1.47
RBM39-219ENST00000453310 ZNF644Q9H582 1327 aaPredicted RBP24.25■■□□□ 1.47
RBM39-219ENST00000453310 KIAA1107Q9UPP5 1409 aa24.25■■□□□ 1.47
RBM39-219ENST00000453310 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
RBM39-219ENST00000453310 ZNF518AQ6AHZ1 1483 aa24.23■■□□□ 1.47
RBM39-219ENST00000453310 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
RBM39-219ENST00000453310 TRAPPC8Q9Y2L5 1435 aa24.21■■□□□ 1.47
RBM39-219ENST00000453310 ZMYM4Q5VZL5 1548 aa24.2■■□□□ 1.47
RBM39-219ENST00000453310 KDM5CP41229 1560 aa24.2■■□□□ 1.46
RBM39-219ENST00000453310 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.46
RBM39-219ENST00000453310 MBD5Q9P267 1494 aa24.18■■□□□ 1.46
RBM39-219ENST00000453310 TCOF1Q13428 1488 aaKnown RBP24.17■■□□□ 1.46
RBM39-219ENST00000453310 AFAP1Q8N556 730 aa24.16■■□□□ 1.46
RBM39-219ENST00000453310 ARHGEF5Q12774 1597 aa24.14■■□□□ 1.45
RBM39-219ENST00000453310 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
RBM39-219ENST00000453310 HECW2Q9P2P5 1572 aa24.13■■□□□ 1.45
RBM39-219ENST00000453310 MAGI2Q86UL8 1455 aa24.13■■□□□ 1.45
RBM39-219ENST00000453310 ZFYVE16Q7Z3T8 1539 aa24.11■■□□□ 1.45
RBM39-219ENST00000453310 ARHGEF40Q8TER5 1519 aa24.11■■□□□ 1.45
RBM39-219ENST00000453310 MLH3Q9UHC1 1453 aa24.1■■□□□ 1.45
RBM39-219ENST00000453310 RSPH4AQ5TD94 716 aa24.09■■□□□ 1.45
RBM39-219ENST00000453310 YEATS2Q9ULM3 1422 aa24.08■■□□□ 1.44
RBM39-219ENST00000453310 INO80Q9ULG1 1556 aaPredicted RBP24.08■■□□□ 1.44
RBM39-219ENST00000453310 KIDINS220Q9ULH0 1771 aa24.07■■□□□ 1.44
RBM39-219ENST00000453310 SPAG9O60271 1321 aaKnown RBP24.07■■□□□ 1.44
RBM39-219ENST00000453310 FAM50AQ14320 339 aaKnown RBP24.06■■□□□ 1.44
RBM39-219ENST00000453310 DNMT1P26358 1616 aaKnown RBP24.06■■□□□ 1.44
RBM39-219ENST00000453310 ATP7AQ04656 1500 aa24.05■■□□□ 1.44
RBM39-219ENST00000453310 RRBP1Q9P2E9 1410 aaKnown RBP24.05■■□□□ 1.44
RBM39-219ENST00000453310 MYT1LQ9UL68 1186 aa24.05■■□□□ 1.44
RBM39-219ENST00000453310 CROCC2H7BZ55 1655 aa24.04■■□□□ 1.44
RBM39-219ENST00000453310 ABCA6Q8N139 1617 aa24.03■■□□□ 1.44
RBM39-219ENST00000453310 DIP2CQ9Y2E4 1556 aa24.03■■□□□ 1.44
RBM39-219ENST00000453310 ABCC5O15440 1437 aa24.02■■□□□ 1.44
RBM39-219ENST00000453310 DAPK1P53355 1430 aa24.02■■□□□ 1.44
RBM39-219ENST00000453310 RTEL1-TNFRSF6BF6WH68 1400 aa24.01■■□□□ 1.43
RBM39-219ENST00000453310 MAST1Q9Y2H9 1570 aa24.01■■□□□ 1.43
RBM39-219ENST00000453310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.01■■□□□ 1.43
RBM39-219ENST00000453310 TSPY4P0CV99 314 aa24■■□□□ 1.43
RBM39-219ENST00000453310 TSPY10P0CW01 314 aa24■■□□□ 1.43
RBM39-219ENST00000453310 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
RBM39-219ENST00000453310 C9orf84Q5VXU9 1444 aa23.99■■□□□ 1.43
RBM39-219ENST00000453310 ATP10AO60312 1499 aa23.99■■□□□ 1.43
RBM39-219ENST00000453310 REREQ9P2R6 1566 aa23.95■■□□□ 1.42
RBM39-219ENST00000453310 SIGLEC1Q9BZZ2 1709 aa23.93■■□□□ 1.42
RBM39-219ENST00000453310 ADGBQ8N7X0 1667 aa23.93■■□□□ 1.42
RBM39-219ENST00000453310 PLXNC1O60486 1568 aa23.92■■□□□ 1.42
RBM39-219ENST00000453310 A2MP01023 1474 aa23.9■■□□□ 1.42
RBM39-219ENST00000453310 PTPRKQ15262 1439 aa23.89■■□□□ 1.41
RBM39-219ENST00000453310 ADGRL2O95490 1459 aa23.87■■□□□ 1.41
RBM39-219ENST00000453310 CHIC2Q9UKJ5 165 aa23.87■■□□□ 1.41
RBM39-219ENST00000453310 ITGAEP38570 1179 aa23.86■■□□□ 1.41
RBM39-219ENST00000453310 ARID4BQ4LE39 1312 aaPredicted RBP23.85■■□□□ 1.41
RBM39-219ENST00000453310 AGLP35573 1532 aa23.85■■□□□ 1.41
RBM39-219ENST00000453310 ANKRD30AQ9BXX3 1397 aa23.85■■□□□ 1.41
RBM39-219ENST00000453310 DHX29Q7Z478 1369 aaKnown RBP23.84■■□□□ 1.41
RBM39-219ENST00000453310 KIF15Q9NS87 1388 aa23.84■■□□□ 1.41
RBM39-219ENST00000453310 NCOA1Q15788 1441 aa23.84■■□□□ 1.41
RBM39-219ENST00000453310 BCORL1Q5H9F3 1711 aa23.82■■□□□ 1.4
RBM39-219ENST00000453310 DUOX2Q9NRD8 1548 aa23.82■■□□□ 1.4
RBM39-219ENST00000453310 RRP7BPQ9NSQ0 103 aa23.81■■□□□ 1.4
RBM39-219ENST00000453310 ROCK1Q13464 1354 aa23.8■■□□□ 1.4
RBM39-219ENST00000453310 EIF2AK4Q9P2K8 1649 aaKnown RBP23.77■■□□□ 1.4
RBM39-219ENST00000453310 ERBINQ96RT1 1412 aa23.76■■□□□ 1.39
RBM39-219ENST00000453310 MLECQ14165 292 aa23.75■■□□□ 1.39
RBM39-219ENST00000453310 ADAMTSL3P82987 1691 aa23.75■■□□□ 1.39
RBM39-219ENST00000453310 KIF3BO15066 747 aa23.72■■□□□ 1.39
RBM39-219ENST00000453310 MADDQ8WXG6 1647 aa23.71■■□□□ 1.39
RBM39-219ENST00000453310 KDM4FA0A1W2PPD8 638 aa23.71■■□□□ 1.39
RBM39-219ENST00000453310 ANKRD50Q9ULJ7 1429 aa23.7■■□□□ 1.38
RBM39-219ENST00000453310 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.38
RBM39-219ENST00000453310 RNF17Q9BXT8 1623 aaKnown RBP23.7■■□□□ 1.38
RBM39-219ENST00000453310 GCC2Q8IWJ2 1684 aa23.67■■□□□ 1.38
RBM39-219ENST00000453310 GGT6Q6P531 493 aa23.67■■□□□ 1.38
RBM39-219ENST00000453310 RIMS1Q86UR5 1692 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms