RNA–Protein interactions for RNA: ENST00000450295.5

SEMA4D-212, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-212ENST00000450295 NUP155O75694 1391 aa16.75■□□□□ 0.27
SEMA4D-212ENST00000450295 CC2D2AQ9P2K1 1620 aa16.75■□□□□ 0.27
SEMA4D-212ENST00000450295 MPHOSPH9Q99550 1183 aa16.75■□□□□ 0.27
SEMA4D-212ENST00000450295 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
SEMA4D-212ENST00000450295 KIF21BO75037 1637 aa16.75■□□□□ 0.27
SEMA4D-212ENST00000450295 DNTTIP2Q5QJE6 756 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-212ENST00000450295 C14orf37Q86TY3 774 aa16.74■□□□□ 0.27
SEMA4D-212ENST00000450295 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
SEMA4D-212ENST00000450295 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
SEMA4D-212ENST00000450295 TNNT2P45379 298 aaPredicted RBP16.73■□□□□ 0.27
SEMA4D-212ENST00000450295 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
SEMA4D-212ENST00000450295 FTSJ3Q8IY81 847 aaKnown RBP16.72■□□□□ 0.27
SEMA4D-212ENST00000450295 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
SEMA4D-212ENST00000450295 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
SEMA4D-212ENST00000450295 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
SEMA4D-212ENST00000450295 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
SEMA4D-212ENST00000450295 NEUROD2Q15784 382 aa16.69■□□□□ 0.26
SEMA4D-212ENST00000450295 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
SEMA4D-212ENST00000450295 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
SEMA4D-212ENST00000450295 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
SEMA4D-212ENST00000450295 FRAT1Q92837 279 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-212ENST00000450295 CUX1P39880 1505 aa16.68■□□□□ 0.26
SEMA4D-212ENST00000450295 GGT6Q6P531 493 aa16.68■□□□□ 0.26
SEMA4D-212ENST00000450295 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
SEMA4D-212ENST00000450295 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
SEMA4D-212ENST00000450295 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
SEMA4D-212ENST00000450295 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
SEMA4D-212ENST00000450295 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
SEMA4D-212ENST00000450295 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
SEMA4D-212ENST00000450295 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
SEMA4D-212ENST00000450295 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.25
SEMA4D-212ENST00000450295 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
SEMA4D-212ENST00000450295 EIF3AQ14152 1382 aaKnown RBP16.63■□□□□ 0.25
SEMA4D-212ENST00000450295 CASKIN1Q8WXD9 1431 aa16.63■□□□□ 0.25
SEMA4D-212ENST00000450295 EFCAB5A4FU69 1503 aa16.62■□□□□ 0.25
SEMA4D-212ENST00000450295 MYOM3Q5VTT5 1437 aa16.62■□□□□ 0.25
SEMA4D-212ENST00000450295 AQRO60306 1485 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEMA4D-212ENST00000450295 KIF3BO15066 747 aa16.62■□□□□ 0.25
SEMA4D-212ENST00000450295 HSPA5P11021 654 aaKnown RBP16.62■□□□□ 0.25
SEMA4D-212ENST00000450295 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
SEMA4D-212ENST00000450295 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
SEMA4D-212ENST00000450295 L1TD1Q5T7N2 865 aaKnown RBP16.61■□□□□ 0.25
SEMA4D-212ENST00000450295 PEG3Q9GZU2 1588 aa16.59■□□□□ 0.25
SEMA4D-212ENST00000450295 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
SEMA4D-212ENST00000450295 LAMC3Q9Y6N6 1575 aa16.59■□□□□ 0.25
SEMA4D-212ENST00000450295 PRXQ9BXM0 1461 aa16.58■□□□□ 0.25
SEMA4D-212ENST00000450295 ROCK2O75116 1388 aaKnown RBP16.58■□□□□ 0.24
SEMA4D-212ENST00000450295 MLECQ14165 292 aa16.58■□□□□ 0.24
SEMA4D-212ENST00000450295 HSCBQ8IWL3 235 aa16.57■□□□□ 0.24
SEMA4D-212ENST00000450295 UACAQ9BZF9 1416 aa16.57■□□□□ 0.24
SEMA4D-212ENST00000450295 FYCO1Q9BQS8 1478 aa16.57■□□□□ 0.24
SEMA4D-212ENST00000450295 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-212ENST00000450295 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
SEMA4D-212ENST00000450295 NESP48681 1621 aa16.55■□□□□ 0.24
SEMA4D-212ENST00000450295 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-212ENST00000450295 FGD6Q6ZV73 1430 aa16.55■□□□□ 0.24
SEMA4D-212ENST00000450295 MS4A1P11836 297 aa16.54■□□□□ 0.24
SEMA4D-212ENST00000450295 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
SEMA4D-212ENST00000450295 HAP1P54257 671 aaPredicted RBP16.54■□□□□ 0.24
SEMA4D-212ENST00000450295 KTN1Q86UP2 1357 aaKnown RBP16.54■□□□□ 0.24
SEMA4D-212ENST00000450295 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
SEMA4D-212ENST00000450295 SRPK2P78362 688 aaKnown RBP16.54■□□□□ 0.24
SEMA4D-212ENST00000450295 MSNP26038 577 aaKnown RBP16.53■□□□□ 0.24
SEMA4D-212ENST00000450295 ZRSR1Q15695 479 aaKnown RBP16.53■□□□□ 0.24
SEMA4D-212ENST00000450295 RALBP1Q15311 655 aa16.52■□□□□ 0.24
SEMA4D-212ENST00000450295 HDGFL2Q7Z4V5 671 aaPredicted RBP16.52■□□□□ 0.24
SEMA4D-212ENST00000450295 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
SEMA4D-212ENST00000450295 FOXD1Q16676 465 aa16.52■□□□□ 0.24
SEMA4D-212ENST00000450295 CCDC144AA2RUR9 1427 aa16.51■□□□□ 0.23
SEMA4D-212ENST00000450295 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-212ENST00000450295 L3MBTL2Q969R5 705 aa16.51■□□□□ 0.23
SEMA4D-212ENST00000450295 MORC1Q86VD1 984 aa16.5■□□□□ 0.23
SEMA4D-212ENST00000450295 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
SEMA4D-212ENST00000450295 STAC3Q96MF2 364 aa16.49■□□□□ 0.23
SEMA4D-212ENST00000450295 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
SEMA4D-212ENST00000450295 ABCA10Q8WWZ4 1543 aa16.48■□□□□ 0.23
SEMA4D-212ENST00000450295 GZF1Q9H116 711 aaPredicted RBP16.48■□□□□ 0.23
SEMA4D-212ENST00000450295 RCAN3Q9UKA8 241 aa16.48■□□□□ 0.23
SEMA4D-212ENST00000450295 TCERG1O14776 1098 aaKnown RBP16.47■□□□□ 0.23
SEMA4D-212ENST00000450295 CDK11BP21127 795 aaKnown RBP16.46■□□□□ 0.23
SEMA4D-212ENST00000450295 SLKQ9H2G2 1235 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-212ENST00000450295 EID1Q9Y6B2 187 aa16.45■□□□□ 0.22
SEMA4D-212ENST00000450295 NCOA2Q15596 1464 aa16.45■□□□□ 0.22
SEMA4D-212ENST00000450295 U2SURPO15042 1029 aaKnown RBP16.44■□□□□ 0.22
SEMA4D-212ENST00000450295 ARID3AQ99856 593 aa16.43■□□□□ 0.22
SEMA4D-212ENST00000450295 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
SEMA4D-212ENST00000450295 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
SEMA4D-212ENST00000450295 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
SEMA4D-212ENST00000450295 EHBP1L1Q8N3D4 1523 aa16.42■□□□□ 0.22
SEMA4D-212ENST00000450295 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
SEMA4D-212ENST00000450295 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
SEMA4D-212ENST00000450295 TAOK2Q9UL54 1235 aa16.41■□□□□ 0.22
SEMA4D-212ENST00000450295 CHAF1AQ13111 956 aaPredicted RBP16.41■□□□□ 0.22
SEMA4D-212ENST00000450295 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
SEMA4D-212ENST00000450295 PHLDB1Q86UU1 1377 aa16.4■□□□□ 0.22
SEMA4D-212ENST00000450295 MIA2Q96PC5 1412 aa16.4■□□□□ 0.22
SEMA4D-212ENST00000450295 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
SEMA4D-212ENST00000450295 PLEKHH2Q8IVE3 1493 aa16.4■□□□□ 0.22
SEMA4D-212ENST00000450295 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
SEMA4D-212ENST00000450295 VGFO15240 615 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms