RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ARHGAP5Q13017 1502 aa21.97■■□□□ 1.11
GTF3C3-206ENST00000448539 CCNB3Q8WWL7 1395 aa21.97■■□□□ 1.11
GTF3C3-206ENST00000448539 LRRC9Q6ZRR7 1453 aa21.94■■□□□ 1.1
GTF3C3-206ENST00000448539 RAPGEF3O95398 923 aa21.92■■□□□ 1.1
GTF3C3-206ENST00000448539 DENND4BO75064 1496 aaPredicted RBP21.91■■□□□ 1.1
GTF3C3-206ENST00000448539 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
GTF3C3-206ENST00000448539 CFDP1Q9UEE9 299 aaPredicted RBP21.91■■□□□ 1.1
GTF3C3-206ENST00000448539 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
GTF3C3-206ENST00000448539 ZNF777Q9ULD5 760 aaPredicted RBP21.9■■□□□ 1.1
GTF3C3-206ENST00000448539 PREX2Q70Z35 1606 aa21.9■■□□□ 1.1
GTF3C3-206ENST00000448539 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
GTF3C3-206ENST00000448539 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
GTF3C3-206ENST00000448539 NCOA2Q15596 1464 aa21.89■■□□□ 1.09
GTF3C3-206ENST00000448539 CDC42BPAQ5VT25 1732 aa21.86■■□□□ 1.09
GTF3C3-206ENST00000448539 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
GTF3C3-206ENST00000448539 ITSN2Q9NZM3 1697 aa21.82■■□□□ 1.08
GTF3C3-206ENST00000448539 POGZQ7Z3K3 1410 aa21.81■■□□□ 1.08
GTF3C3-206ENST00000448539 FRMPD1Q5SYB0 1578 aa21.79■■□□□ 1.08
GTF3C3-206ENST00000448539 PLEKHH2Q8IVE3 1493 aa21.79■■□□□ 1.08
GTF3C3-206ENST00000448539 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
GTF3C3-206ENST00000448539 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
GTF3C3-206ENST00000448539 ABCC1P33527 1531 aa21.78■■□□□ 1.08
GTF3C3-206ENST00000448539 RICTORQ6R327 1708 aa21.77■■□□□ 1.08
GTF3C3-206ENST00000448539 AFAP1Q8N556 730 aa21.77■■□□□ 1.08
GTF3C3-206ENST00000448539 HNRNPMP52272 730 aaKnown RBP eCLIP21.76■■□□□ 1.07
GTF3C3-206ENST00000448539 SAMD9LQ8IVG5 1584 aa21.76■■□□□ 1.07
GTF3C3-206ENST00000448539 KIAA1107Q9UPP5 1409 aa21.75■■□□□ 1.07
GTF3C3-206ENST00000448539 ARHGEF12Q9NZN5 1544 aa21.74■■□□□ 1.07
GTF3C3-206ENST00000448539 ZNF644Q9H582 1327 aaPredicted RBP21.74■■□□□ 1.07
GTF3C3-206ENST00000448539 MAGI2Q86UL8 1455 aa21.73■■□□□ 1.07
GTF3C3-206ENST00000448539 ZMYM4Q5VZL5 1548 aa21.73■■□□□ 1.07
GTF3C3-206ENST00000448539 SYCP2Q9BX26 1530 aa21.73■■□□□ 1.07
GTF3C3-206ENST00000448539 MYOM3Q5VTT5 1437 aa21.72■■□□□ 1.07
GTF3C3-206ENST00000448539 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
GTF3C3-206ENST00000448539 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.07
GTF3C3-206ENST00000448539 MIA2Q96PC5 1412 aa21.7■■□□□ 1.06
GTF3C3-206ENST00000448539 HECW2Q9P2P5 1572 aa21.69■■□□□ 1.06
GTF3C3-206ENST00000448539 CAMSAP2Q08AD1 1489 aa21.68■■□□□ 1.06
GTF3C3-206ENST00000448539 ARHGEF40Q8TER5 1519 aa21.68■■□□□ 1.06
GTF3C3-206ENST00000448539 KDM5CP41229 1560 aa21.68■■□□□ 1.06
GTF3C3-206ENST00000448539 YEATS2Q9ULM3 1422 aa21.67■■□□□ 1.06
GTF3C3-206ENST00000448539 SPAG9O60271 1321 aaKnown RBP21.67■■□□□ 1.06
GTF3C3-206ENST00000448539 ADAMTSL3P82987 1691 aa21.66■■□□□ 1.06
GTF3C3-206ENST00000448539 ARID4BQ4LE39 1312 aaPredicted RBP21.66■■□□□ 1.06
GTF3C3-206ENST00000448539 RSPH4AQ5TD94 716 aa21.66■■□□□ 1.06
GTF3C3-206ENST00000448539 PPARGC1BQ86YN6 1023 aaKnown RBP21.66■■□□□ 1.06
GTF3C3-206ENST00000448539 MLH3Q9UHC1 1453 aa21.65■■□□□ 1.06
GTF3C3-206ENST00000448539 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
GTF3C3-206ENST00000448539 MBD5Q9P267 1494 aa21.63■■□□□ 1.05
GTF3C3-206ENST00000448539 ATP10AO60312 1499 aa21.62■■□□□ 1.05
GTF3C3-206ENST00000448539 CCDC141Q6ZP82 1450 aa21.61■■□□□ 1.05
GTF3C3-206ENST00000448539 TSPY4P0CV99 314 aa21.61■■□□□ 1.05
GTF3C3-206ENST00000448539 TSPY10P0CW01 314 aa21.61■■□□□ 1.05
GTF3C3-206ENST00000448539 FGD6Q6ZV73 1430 aa21.61■■□□□ 1.05
GTF3C3-206ENST00000448539 C9orf84Q5VXU9 1444 aa21.6■■□□□ 1.05
GTF3C3-206ENST00000448539 PTPRMP28827 1452 aa21.59■■□□□ 1.05
GTF3C3-206ENST00000448539 MADDQ8WXG6 1647 aa21.58■■□□□ 1.04
GTF3C3-206ENST00000448539 PTPN23Q9H3S7 1636 aa21.57■■□□□ 1.04
GTF3C3-206ENST00000448539 ARHGEF5Q12774 1597 aa21.56■■□□□ 1.04
GTF3C3-206ENST00000448539 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
GTF3C3-206ENST00000448539 SIGLEC1Q9BZZ2 1709 aa21.55■■□□□ 1.04
GTF3C3-206ENST00000448539 FAM50AQ14320 339 aaKnown RBP21.55■■□□□ 1.04
GTF3C3-206ENST00000448539 DIP2CQ9Y2E4 1556 aa21.55■■□□□ 1.04
GTF3C3-206ENST00000448539 KIDINS220Q9ULH0 1771 aa21.54■■□□□ 1.04
GTF3C3-206ENST00000448539 ABCA6Q8N139 1617 aa21.54■■□□□ 1.04
GTF3C3-206ENST00000448539 RTEL1-TNFRSF6BF6WH68 1400 aa21.54■■□□□ 1.04
GTF3C3-206ENST00000448539 TCOF1Q13428 1488 aaKnown RBP21.53■■□□□ 1.04
GTF3C3-206ENST00000448539 INO80Q9ULG1 1556 aaPredicted RBP21.52■■□□□ 1.04
GTF3C3-206ENST00000448539 MLECQ14165 292 aa21.51■■□□□ 1.03
GTF3C3-206ENST00000448539 RIMS1Q86UR5 1692 aaKnown RBP21.5■■□□□ 1.03
GTF3C3-206ENST00000448539 REREQ9P2R6 1566 aa21.48■■□□□ 1.03
GTF3C3-206ENST00000448539 A2MP01023 1474 aa21.47■■□□□ 1.03
GTF3C3-206ENST00000448539 ABCC5O15440 1437 aa21.46■■□□□ 1.03
GTF3C3-206ENST00000448539 DAPK1P53355 1430 aa21.46■■□□□ 1.03
GTF3C3-206ENST00000448539 AGLP35573 1532 aa21.44■■□□□ 1.02
GTF3C3-206ENST00000448539 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
GTF3C3-206ENST00000448539 DNMT1P26358 1616 aaKnown RBP21.43■■□□□ 1.02
GTF3C3-206ENST00000448539 ADGBQ8N7X0 1667 aa21.43■■□□□ 1.02
GTF3C3-206ENST00000448539 DHX29Q7Z478 1369 aaKnown RBP21.42■■□□□ 1.02
GTF3C3-206ENST00000448539 SHANK2Q9UPX8 1470 aa21.42■■□□□ 1.02
GTF3C3-206ENST00000448539 ESF1Q9H501 851 aaKnown RBP21.41■■□□□ 1.02
GTF3C3-206ENST00000448539 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
GTF3C3-206ENST00000448539 FER1L4A9Z1Z3 1794 aa21.4■■□□□ 1.02
GTF3C3-206ENST00000448539 ILDR1Q86SU0 546 aaPredicted RBP21.39■■□□□ 1.01
GTF3C3-206ENST00000448539 ANKRD30AQ9BXX3 1397 aa21.38■■□□□ 1.01
GTF3C3-206ENST00000448539 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
GTF3C3-206ENST00000448539 RRP7BPQ9NSQ0 103 aa21.38■■□□□ 1.01
GTF3C3-206ENST00000448539 PLXNC1O60486 1568 aa21.38■■□□□ 1.01
GTF3C3-206ENST00000448539 LMTK3Q96Q04 1460 aa21.38■■□□□ 1.01
GTF3C3-206ENST00000448539 CROCC2H7BZ55 1655 aa21.37■■□□□ 1.01
GTF3C3-206ENST00000448539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.37■■□□□ 1.01
GTF3C3-206ENST00000448539 GGT6Q6P531 493 aa21.37■■□□□ 1.01
GTF3C3-206ENST00000448539 KIF3BO15066 747 aa21.36■■□□□ 1.01
GTF3C3-206ENST00000448539 ITGAEP38570 1179 aa21.36■■□□□ 1.01
GTF3C3-206ENST00000448539 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
GTF3C3-206ENST00000448539 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
GTF3C3-206ENST00000448539 DUOX2Q9NRD8 1548 aa21.32■■□□□ 1
GTF3C3-206ENST00000448539 NCOA1Q15788 1441 aa21.3■■□□□ 1
GTF3C3-206ENST00000448539 PPP6R1Q9UPN7 881 aa21.3■■□□□ 1
GTF3C3-206ENST00000448539 ADGRL2O95490 1459 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms