RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 HOXB3P14651 431 aaPredicted RBP7.32□□□□□ -1.24
PMS1-216ENST00000447734 PSEN1P49768 467 aa7.32□□□□□ -1.24
PMS1-216ENST00000447734 MKRN3Q13064 507 aaKnown RBP7.32□□□□□ -1.24
PMS1-216ENST00000447734 HOMEZQ8IX15 550 aa7.32□□□□□ -1.24
PMS1-216ENST00000447734 L3MBTL3Q96JM7 780 aaPredicted RBP7.32□□□□□ -1.24
PMS1-216ENST00000447734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.32□□□□□ -1.243e-7■■□□□ 12.6
PMS1-216ENST00000447734 GSE1Q14687 1217 aa7.3□□□□□ -1.24
PMS1-216ENST00000447734 TMEM132AQ24JP5 1023 aa7.3□□□□□ -1.24
PMS1-216ENST00000447734 GOLGA2Q08379 1002 aa7.27□□□□□ -1.25
PMS1-216ENST00000447734 C14orf37Q86TY3 774 aa7.27□□□□□ -1.25
PMS1-216ENST00000447734 CIZ1Q9ULV3 898 aaPredicted RBP7.26□□□□□ -1.25
PMS1-216ENST00000447734 PDAP1Q13442 181 aaKnown RBP7.24□□□□□ -1.25
PMS1-216ENST00000447734 HS6ST3Q8IZP7 471 aa7.24□□□□□ -1.25
PMS1-216ENST00000447734 BOLA1Q9Y3E2 137 aa7.24□□□□□ -1.25
PMS1-216ENST00000447734 CABP2Q9NPB3 220 aa7.23□□□□□ -1.25
PMS1-216ENST00000447734 HOXB1P14653 301 aaPredicted RBP7.22□□□□□ -1.25
PMS1-216ENST00000447734 TRIM41Q8WV44 630 aa7.2□□□□□ -1.26
PMS1-216ENST00000447734 TMEM92Q6UXU6 159 aa7.19□□□□□ -1.26
PMS1-216ENST00000447734 EFCAB3Q8N7B9 438 aa7.15□□□□□ -1.26
PMS1-216ENST00000447734 ERBB3P21860 1342 aa7.15□□□□□ -1.26
PMS1-216ENST00000447734 DOK7Q18PE1 504 aa7.14□□□□□ -1.27
PMS1-216ENST00000447734 VARS2Q5ST30 1063 aaKnown RBP7.14□□□□□ -1.27
PMS1-216ENST00000447734 ZNF710Q8N1W2 664 aa7.14□□□□□ -1.27
PMS1-216ENST00000447734 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
PMS1-216ENST00000447734 GTPBP6O43824 516 aaPredicted RBP7.12□□□□□ -1.27
PMS1-216ENST00000447734 GPR153Q6NV75 609 aa7.12□□□□□ -1.27
PMS1-216ENST00000447734 NKX1-1Q15270 411 aaPredicted RBP7.11□□□□□ -1.27
PMS1-216ENST00000447734 MICALL2Q8IY33 904 aa7.11□□□□□ -1.27
PMS1-216ENST00000447734 MS4A4AQ96JQ5 239 aa7.11□□□□□ -1.27
PMS1-216ENST00000447734 G3V3G9 751 aa7.1□□□□□ -1.27
PMS1-216ENST00000447734 RNF25Q96BH1 459 aaPredicted RBP7.1□□□□□ -1.27
PMS1-216ENST00000447734 P3H3Q8IVL6 736 aa7.09□□□□□ -1.27
PMS1-216ENST00000447734 ZNF687Q8N1G0 1237 aa7.09□□□□□ -1.27
PMS1-216ENST00000447734 MYT1LQ9UL68 1186 aa7.08□□□□□ -1.28
PMS1-216ENST00000447734 ZSWIM6Q9HCJ5 1215 aa7.07□□□□□ -1.28
PMS1-216ENST00000447734 RIOK3O14730 519 aaKnown RBP7.05□□□□□ -1.28
PMS1-216ENST00000447734 RIMBP2O15034 1052 aa7.05□□□□□ -1.28
PMS1-216ENST00000447734 SUPT5HO00267 1087 aaKnown RBP7.04□□□□□ -1.28
PMS1-216ENST00000447734 STK25O00506 426 aa7.04□□□□□ -1.28
PMS1-216ENST00000447734 LMOD2Q6P5Q4 547 aa7.04□□□□□ -1.28
PMS1-216ENST00000447734 KHSRPQ92945 711 aaKnown RBP eCLIP7.04□□□□□ -1.288e-10■■□□□ 12.3
PMS1-216ENST00000447734 BRPF1P55201 1214 aaPredicted RBP7.03□□□□□ -1.28
PMS1-216ENST00000447734 ARSIQ5FYB1 569 aa7.03□□□□□ -1.28
PMS1-216ENST00000447734 RYDENQ9NUL5 291 aaKnown RBP7.03□□□□□ -1.28
PMS1-216ENST00000447734 PHF8Q9UPP1 1060 aa7.03□□□□□ -1.28
PMS1-216ENST00000447734 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.01□□□□□ -1.29
PMS1-216ENST00000447734 SOX12O15370 315 aa7.01□□□□□ -1.29
PMS1-216ENST00000447734 RANGAP1P46060 587 aaPredicted RBP7.01□□□□□ -1.29
PMS1-216ENST00000447734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.01□□□□□ -1.29
PMS1-216ENST00000447734 ZFP91Q96JP5 570 aaPredicted RBP7.01□□□□□ -1.29
PMS1-216ENST00000447734 VGFO15240 615 aaPredicted RBP7□□□□□ -1.29
PMS1-216ENST00000447734 PODXL2Q9NZ53 605 aa7□□□□□ -1.29
PMS1-216ENST00000447734 POTEEQ6S8J3 1075 aa6.99□□□□□ -1.29
PMS1-216ENST00000447734 ZNF316A6NFI3 1004 aaPredicted RBP6.98□□□□□ -1.29
PMS1-216ENST00000447734 WDR70Q9NW82 654 aa6.98□□□□□ -1.29
PMS1-216ENST00000447734 PTGER2P43116 358 aa6.97□□□□□ -1.29
PMS1-216ENST00000447734 NEUROD2Q15784 382 aa6.97□□□□□ -1.29
PMS1-216ENST00000447734 ANKRD13DQ6ZTN6 518 aa6.97□□□□□ -1.29
PMS1-216ENST00000447734 FBXO22Q8NEZ5 403 aa6.97□□□□□ -1.29
PMS1-216ENST00000447734 STK24Q9Y6E0 443 aa6.97□□□□□ -1.29
PMS1-216ENST00000447734 KIF3CO14782 793 aa6.96□□□□□ -1.3
PMS1-216ENST00000447734 LSM11P83369 360 aaKnown RBP eCLIP6.96□□□□□ -1.3
PMS1-216ENST00000447734 KCNV2Q8TDN2 545 aa6.96□□□□□ -1.3
PMS1-216ENST00000447734 BCL11BQ9C0K0 894 aaPredicted RBP6.94□□□□□ -1.3
PMS1-216ENST00000447734 NUDT7P0C024 238 aa6.91□□□□□ -1.3
PMS1-216ENST00000447734 ZC3H15Q8WU90 426 aaKnown RBP6.91□□□□□ -1.3
PMS1-216ENST00000447734 MFRPQ9BY79 579 aa6.91□□□□□ -1.3
PMS1-216ENST00000447734 AXIN2Q9Y2T1 843 aa6.91□□□□□ -1.3
PMS1-216ENST00000447734 C2orf72A6NCS6 295 aa6.9□□□□□ -1.3
PMS1-216ENST00000447734 NLRP6P59044 892 aa6.89□□□□□ -1.31
PMS1-216ENST00000447734 SLC24A3Q9HC58 644 aa6.89□□□□□ -1.31
PMS1-216ENST00000447734 LHX6Q9UPM6 363 aa6.89□□□□□ -1.31
PMS1-216ENST00000447734 UBTFP17480 764 aaKnown RBP6.87□□□□□ -1.31
PMS1-216ENST00000447734 PBX2P40425 430 aa6.87□□□□□ -1.31
PMS1-216ENST00000447734 CADPS2Q86UW7 1296 aa6.87□□□□□ -1.31
PMS1-216ENST00000447734 SLC34A2O95436 690 aa6.86□□□□□ -1.31
PMS1-216ENST00000447734 PCDHGA4Q9Y5G9 962 aa6.86□□□□□ -1.31
PMS1-216ENST00000447734 KDM4FA0A1W2PPD8 638 aa6.85□□□□□ -1.31
PMS1-216ENST00000447734 PLA2G2EQ9NZK7 142 aa6.85□□□□□ -1.31
PMS1-216ENST00000447734 ARHGEF1Q92888 912 aaKnown RBP6.83□□□□□ -1.32
PMS1-216ENST00000447734 TRIM26Q12899 539 aaPredicted RBP6.82□□□□□ -1.32
PMS1-216ENST00000447734 ADGRD1Q6QNK2 874 aa6.82□□□□□ -1.32
PMS1-216ENST00000447734 HRO43593 1189 aa6.81□□□□□ -1.32
PMS1-216ENST00000447734 ZMYND15Q9H091 742 aa6.81□□□□□ -1.32
PMS1-216ENST00000447734 HCSTQ9UBK5 93 aa6.81□□□□□ -1.32
PMS1-216ENST00000447734 TESPA1A2RU30 521 aaPredicted RBP6.8□□□□□ -1.32
PMS1-216ENST00000447734 PPP1R37O75864 691 aa6.8□□□□□ -1.32
PMS1-216ENST00000447734 DMRTA1Q5VZB9 504 aa6.8□□□□□ -1.32
PMS1-216ENST00000447734 RSPH6AQ9H0K4 717 aa6.8□□□□□ -1.32
PMS1-216ENST00000447734 ARHGAP33O14559 1287 aa6.79□□□□□ -1.32
PMS1-216ENST00000447734 SEMA3EO15041 775 aa6.79□□□□□ -1.32
PMS1-216ENST00000447734 ZMYND10O75800 440 aa6.78□□□□□ -1.32
PMS1-216ENST00000447734 PSEN2P49810 448 aa6.78□□□□□ -1.32
PMS1-216ENST00000447734 E2F4Q16254 413 aa6.78□□□□□ -1.32
PMS1-216ENST00000447734 NPM2Q86SE8 214 aaKnown RBP6.78□□□□□ -1.32
PMS1-216ENST00000447734 SMYD5Q6GMV2 418 aa6.76□□□□□ -1.33
PMS1-216ENST00000447734 TK2O00142 265 aa6.75□□□□□ -1.33
PMS1-216ENST00000447734 TMC2Q8TDI7 906 aa6.74□□□□□ -1.33
PMS1-216ENST00000447734 PTCD2Q8WV60 388 aaKnown RBP6.74□□□□□ -1.33
PMS1-216ENST00000447734 ARID3AQ99856 593 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms