RNA–Protein interactions for RNA: ENST00000446933.1

KNOP1P3-201, Transcript of lysine rich nucleolar protein 1 pseudogene 3, humanhuman

BASIC

Gene KNOP1P3, Length 426 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P3-201ENST00000446933 VPS8Q8N3P4 1428 aa8.2□□□□□ -1.1
KNOP1P3-201ENST00000446933 TEX14Q8IWB6 1497 aa8.19□□□□□ -1.1
KNOP1P3-201ENST00000446933 PPRC1Q5VV67 1664 aaKnown RBP8.19□□□□□ -1.1
KNOP1P3-201ENST00000446933 PCF11O94913 1555 aaKnown RBP8.18□□□□□ -1.1
KNOP1P3-201ENST00000446933 TTBK1Q5TCY1 1321 aaPredicted RBP8.18□□□□□ -1.1
KNOP1P3-201ENST00000446933 TROQ12816 1431 aaPredicted RBP8.18□□□□□ -1.1
KNOP1P3-201ENST00000446933 AMER1Q5JTC6 1135 aaPredicted RBP8.17□□□□□ -1.1
KNOP1P3-201ENST00000446933 ZNF219Q9P2Y4 722 aaPredicted RBP8.17□□□□□ -1.1
KNOP1P3-201ENST00000446933 CD109Q6YHK3 1445 aa8.17□□□□□ -1.1
KNOP1P3-201ENST00000446933 NEO1Q92859 1461 aa8.17□□□□□ -1.1
KNOP1P3-201ENST00000446933 RANGAP1P46060 587 aaPredicted RBP8.16□□□□□ -1.1
KNOP1P3-201ENST00000446933 CDK13Q14004 1512 aaKnown RBP8.16□□□□□ -1.1
KNOP1P3-201ENST00000446933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.15□□□□□ -1.1
KNOP1P3-201ENST00000446933 PLCH2O75038 1416 aa8.15□□□□□ -1.1
KNOP1P3-201ENST00000446933 KIF14Q15058 1648 aa8.14□□□□□ -1.11
KNOP1P3-201ENST00000446933 CFAP74Q9C0B2 1584 aa8.13□□□□□ -1.11
KNOP1P3-201ENST00000446933 KCNH8Q96L42 1107 aa8.12□□□□□ -1.11
KNOP1P3-201ENST00000446933 TIAM1Q13009 1591 aa8.12□□□□□ -1.11
KNOP1P3-201ENST00000446933 TSPOAP1O95153 1857 aa8.12□□□□□ -1.11
KNOP1P3-201ENST00000446933 MYO5CQ9NQX4 1742 aa8.12□□□□□ -1.11
KNOP1P3-201ENST00000446933 TTC37Q6PGP7 1564 aa8.11□□□□□ -1.11
KNOP1P3-201ENST00000446933 RTN4Q9NQC3 1192 aaKnown RBP8.11□□□□□ -1.11
KNOP1P3-201ENST00000446933 EHBP1L1Q8N3D4 1523 aa8.11□□□□□ -1.11
KNOP1P3-201ENST00000446933 LRRC9Q6ZRR7 1453 aa8.1□□□□□ -1.11
KNOP1P3-201ENST00000446933 CDC42BPBQ9Y5S2 1711 aa8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 FANCAO15360 1455 aa8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 COL17A1Q9UMD9 1497 aaPredicted RBP8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 EFCAB2Q5VUJ9 269 aa8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 RNF39Q9H2S5 420 aa8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 KDM6BO15054 1643 aa8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 PREX2Q70Z35 1606 aa8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 KIAA1107Q9UPP5 1409 aa8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 CDC42BPAQ5VT25 1732 aa8.09□□□□□ -1.11
KNOP1P3-201ENST00000446933 MTUS2Q5JR59 1369 aa8.09□□□□□ -1.12
KNOP1P3-201ENST00000446933 GPATCH8Q9UKJ3 1502 aaKnown RBP8.08□□□□□ -1.12
KNOP1P3-201ENST00000446933 MAGI2Q86UL8 1455 aa8.08□□□□□ -1.12
KNOP1P3-201ENST00000446933 AKNAQ7Z591 1439 aa8.08□□□□□ -1.12
KNOP1P3-201ENST00000446933 SUPT6HQ7KZ85 1726 aaKnown RBP8.07□□□□□ -1.12
KNOP1P3-201ENST00000446933 ARID3CA6NKF2 412 aa8.07□□□□□ -1.12
KNOP1P3-201ENST00000446933 ATP1B4Q9UN42 357 aaPredicted RBP8.07□□□□□ -1.12
KNOP1P3-201ENST00000446933 ZMYM4Q5VZL5 1548 aa8.07□□□□□ -1.12
KNOP1P3-201ENST00000446933 PLEKHH2Q8IVE3 1493 aa8.06□□□□□ -1.12
KNOP1P3-201ENST00000446933 RICTORQ6R327 1708 aa8.06□□□□□ -1.12
KNOP1P3-201ENST00000446933 ITSN2Q9NZM3 1697 aa8.06□□□□□ -1.12
KNOP1P3-201ENST00000446933 RSPH4AQ5TD94 716 aa8.06□□□□□ -1.12
KNOP1P3-201ENST00000446933 MIA2Q96PC5 1412 aa8.05□□□□□ -1.12
KNOP1P3-201ENST00000446933 NCOA2Q15596 1464 aa8.05□□□□□ -1.12
KNOP1P3-201ENST00000446933 KDM5CP41229 1560 aa8.05□□□□□ -1.12
KNOP1P3-201ENST00000446933 CCNB3Q8WWL7 1395 aa8.04□□□□□ -1.12
KNOP1P3-201ENST00000446933 DENND4BO75064 1496 aaPredicted RBP8.04□□□□□ -1.12
KNOP1P3-201ENST00000446933 ADGRL1O94910 1474 aa8.04□□□□□ -1.12
KNOP1P3-201ENST00000446933 ZNF518AQ6AHZ1 1483 aa8.04□□□□□ -1.12
KNOP1P3-201ENST00000446933 POGZQ7Z3K3 1410 aa8.03□□□□□ -1.12
KNOP1P3-201ENST00000446933 ARHGAP5Q13017 1502 aa8.03□□□□□ -1.12
KNOP1P3-201ENST00000446933 FRMPD1Q5SYB0 1578 aa8.03□□□□□ -1.12
KNOP1P3-201ENST00000446933 MLH3Q9UHC1 1453 aa8.03□□□□□ -1.12
KNOP1P3-201ENST00000446933 ABCC1P33527 1531 aa8.03□□□□□ -1.12
KNOP1P3-201ENST00000446933 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
KNOP1P3-201ENST00000446933 C1QBPQ07021 282 aaKnown RBP8.02□□□□□ -1.13
KNOP1P3-201ENST00000446933 MKRN4PQ13434 485 aaPredicted RBP8.02□□□□□ -1.13
KNOP1P3-201ENST00000446933 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
KNOP1P3-201ENST00000446933 CFDP1Q9UEE9 299 aaPredicted RBP8.02□□□□□ -1.13
KNOP1P3-201ENST00000446933 MYOM3Q5VTT5 1437 aa8.02□□□□□ -1.13
KNOP1P3-201ENST00000446933 SAMD9LQ8IVG5 1584 aa8.01□□□□□ -1.13
KNOP1P3-201ENST00000446933 REREQ9P2R6 1566 aa8.01□□□□□ -1.13
KNOP1P3-201ENST00000446933 MBD5Q9P267 1494 aa8.01□□□□□ -1.13
KNOP1P3-201ENST00000446933 PROM2Q8N271 834 aa8.01□□□□□ -1.13
KNOP1P3-201ENST00000446933 RTEL1-TNFRSF6BF6WH68 1400 aa8.01□□□□□ -1.13
KNOP1P3-201ENST00000446933 ARHGEF5Q12774 1597 aa8.01□□□□□ -1.13
KNOP1P3-201ENST00000446933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8□□□□□ -1.13
KNOP1P3-201ENST00000446933 ARHGEF12Q9NZN5 1544 aa8□□□□□ -1.13
KNOP1P3-201ENST00000446933 SPINK5Q9NQ38 1064 aaPredicted RBP8□□□□□ -1.13
KNOP1P3-201ENST00000446933 RAPGEF3O95398 923 aa7.98□□□□□ -1.13
KNOP1P3-201ENST00000446933 TCOF1Q13428 1488 aaKnown RBP7.98□□□□□ -1.13
KNOP1P3-201ENST00000446933 ARHGEF40Q8TER5 1519 aa7.98□□□□□ -1.13
KNOP1P3-201ENST00000446933 HECW2Q9P2P5 1572 aa7.97□□□□□ -1.13
KNOP1P3-201ENST00000446933 ATP10AO60312 1499 aa7.97□□□□□ -1.13
KNOP1P3-201ENST00000446933 AGLP35573 1532 aa7.97□□□□□ -1.13
KNOP1P3-201ENST00000446933 KIDINS220Q9ULH0 1771 aa7.97□□□□□ -1.13
KNOP1P3-201ENST00000446933 MAST1Q9Y2H9 1570 aa7.97□□□□□ -1.13
KNOP1P3-201ENST00000446933 FGD6Q6ZV73 1430 aa7.96□□□□□ -1.13
KNOP1P3-201ENST00000446933 TRAPPC8Q9Y2L5 1435 aa7.96□□□□□ -1.13
KNOP1P3-201ENST00000446933 CAMSAP2Q08AD1 1489 aa7.96□□□□□ -1.13
KNOP1P3-201ENST00000446933 SPDYE4A6NLX3 237 aa7.96□□□□□ -1.14
KNOP1P3-201ENST00000446933 ZFYVE16Q7Z3T8 1539 aa7.96□□□□□ -1.14
KNOP1P3-201ENST00000446933 SYCP2Q9BX26 1530 aa7.96□□□□□ -1.14
KNOP1P3-201ENST00000446933 INO80Q9ULG1 1556 aaPredicted RBP7.96□□□□□ -1.14
KNOP1P3-201ENST00000446933 BCORL1Q5H9F3 1711 aa7.95□□□□□ -1.14
KNOP1P3-201ENST00000446933 CCDC141Q6ZP82 1450 aa7.95□□□□□ -1.14
KNOP1P3-201ENST00000446933 SHANK2Q9UPX8 1470 aa7.95□□□□□ -1.14
KNOP1P3-201ENST00000446933 AFAP1Q8N556 730 aa7.95□□□□□ -1.14
KNOP1P3-201ENST00000446933 POLA2Q14181 598 aa7.94□□□□□ -1.14
KNOP1P3-201ENST00000446933 C9orf84Q5VXU9 1444 aa7.94□□□□□ -1.14
KNOP1P3-201ENST00000446933 ATP7AQ04656 1500 aa7.93□□□□□ -1.14
KNOP1P3-201ENST00000446933 PLXNC1O60486 1568 aa7.93□□□□□ -1.14
KNOP1P3-201ENST00000446933 DIP2CQ9Y2E4 1556 aa7.93□□□□□ -1.14
KNOP1P3-201ENST00000446933 PTPN23Q9H3S7 1636 aa7.93□□□□□ -1.14
KNOP1P3-201ENST00000446933 ADGBQ8N7X0 1667 aa7.93□□□□□ -1.14
KNOP1P3-201ENST00000446933 HNRNPMP52272 730 aaKnown RBP eCLIP7.93□□□□□ -1.14
KNOP1P3-201ENST00000446933 POTEDQ86YR6 584 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms