RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 THOC2Q8NI27 1593 aaKnown RBP26.04■■□□□ 1.76
PAXBP1-204ENST00000443785 CFDP1Q9UEE9 299 aaPredicted RBP26.04■■□□□ 1.76
PAXBP1-204ENST00000443785 CCDC7Q96M83 1385 aa26.03■■□□□ 1.76
PAXBP1-204ENST00000443785 SAMD9Q5K651 1589 aa26.02■■□□□ 1.76
PAXBP1-204ENST00000443785 LAMC3Q9Y6N6 1575 aa26.02■■□□□ 1.76
PAXBP1-204ENST00000443785 ZNF608Q9ULD9 1512 aaPredicted RBP26■■□□□ 1.75
PAXBP1-204ENST00000443785 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
PAXBP1-204ENST00000443785 PKD2Q13563 968 aa25.99■■□□□ 1.75
PAXBP1-204ENST00000443785 ERICH6Q7L0X2 663 aa25.98■■□□□ 1.75
PAXBP1-204ENST00000443785 CNTLNQ9NXG0 1405 aa25.97■■□□□ 1.75
PAXBP1-204ENST00000443785 PRG4Q92954 1404 aaPredicted RBP25.95■■□□□ 1.74
PAXBP1-204ENST00000443785 KIF21AQ7Z4S6 1674 aa25.94■■□□□ 1.74
PAXBP1-204ENST00000443785 ANKRD30BQ9BXX2 1392 aa25.93■■□□□ 1.74
PAXBP1-204ENST00000443785 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
PAXBP1-204ENST00000443785 ABCC5O15440 1437 aa25.92■■□□□ 1.74
PAXBP1-204ENST00000443785 DAPK1P53355 1430 aa25.9■■□□□ 1.74
PAXBP1-204ENST00000443785 PPP4R2Q9NY27 417 aa25.89■■□□□ 1.73
PAXBP1-204ENST00000443785 IQGAP2Q13576 1575 aa25.87■■□□□ 1.73
PAXBP1-204ENST00000443785 RGL3Q3MIN7 710 aa25.87■■□□□ 1.73
PAXBP1-204ENST00000443785 AKNAQ7Z591 1439 aa25.86■■□□□ 1.73
PAXBP1-204ENST00000443785 NCOA1Q15788 1441 aa25.85■■□□□ 1.73
PAXBP1-204ENST00000443785 HECW1Q76N89 1606 aa25.83■■□□□ 1.73
PAXBP1-204ENST00000443785 ARHGEF11O15085 1522 aa25.83■■□□□ 1.73
PAXBP1-204ENST00000443785 CARD11Q9BXL7 1154 aa25.82■■□□□ 1.72
PAXBP1-204ENST00000443785 TCOF1Q13428 1488 aaKnown RBP25.81■■□□□ 1.72
PAXBP1-204ENST00000443785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.81■■□□□ 1.724e-7■■■□□ 15.8
PAXBP1-204ENST00000443785 HNRNPMP52272 730 aaKnown RBP eCLIP25.81■■□□□ 1.721e-8■■■■□ 20.6
PAXBP1-204ENST00000443785 TMC1Q8TDI8 760 aa25.81■■□□□ 1.72
PAXBP1-204ENST00000443785 DCAF11Q8TEB1 546 aa25.81■■□□□ 1.72
PAXBP1-204ENST00000443785 PLB1Q6P1J6 1458 aa25.8■■□□□ 1.72
PAXBP1-204ENST00000443785 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
PAXBP1-204ENST00000443785 USP47Q96K76 1375 aa25.78■■□□□ 1.72
PAXBP1-204ENST00000443785 MIA2Q96PC5 1412 aa25.78■■□□□ 1.72
PAXBP1-204ENST00000443785 ZBED9Q6R2W3 1325 aa25.78■■□□□ 1.72
PAXBP1-204ENST00000443785 ST20-MTHFSA0A0A6YYL1 179 aa25.77■■□□□ 1.72
PAXBP1-204ENST00000443785 RPRD2Q5VT52 1461 aaKnown RBP25.77■■□□□ 1.72
PAXBP1-204ENST00000443785 NBR1Q14596 966 aa25.77■■□□□ 1.72
PAXBP1-204ENST00000443785 NUP153P49790 1475 aaKnown RBP25.76■■□□□ 1.71
PAXBP1-204ENST00000443785 WDR62O43379 1518 aa25.75■■□□□ 1.71
PAXBP1-204ENST00000443785 BCL11AQ9H165 835 aa25.75■■□□□ 1.71
PAXBP1-204ENST00000443785 NUP155O75694 1391 aa25.75■■□□□ 1.71
PAXBP1-204ENST00000443785 CCDC136Q96JN2 1154 aa25.73■■□□□ 1.71
PAXBP1-204ENST00000443785 TEX14Q8IWB6 1497 aa25.72■■□□□ 1.71
PAXBP1-204ENST00000443785 JPH4Q96JJ6 628 aa25.7■■□□□ 1.7
PAXBP1-204ENST00000443785 DISP1Q96F81 1524 aa25.69■■□□□ 1.7
PAXBP1-204ENST00000443785 PLEKHD1A6NEE1 506 aa25.68■■□□□ 1.7
PAXBP1-204ENST00000443785 GCC2Q8IWJ2 1684 aa25.68■■□□□ 1.7
PAXBP1-204ENST00000443785 ADAMTS12P58397 1594 aa25.66■■□□□ 1.7
PAXBP1-204ENST00000443785 SPATA31E1Q6ZUB1 1445 aa25.66■■□□□ 1.7
PAXBP1-204ENST00000443785 PBRM1Q86U86 1689 aa25.66■■□□□ 1.7
PAXBP1-204ENST00000443785 TSPY4P0CV99 314 aa25.65■■□□□ 1.7
PAXBP1-204ENST00000443785 TSPY10P0CW01 314 aa25.65■■□□□ 1.7
PAXBP1-204ENST00000443785 NPM2Q86SE8 214 aaKnown RBP25.65■■□□□ 1.7
PAXBP1-204ENST00000443785 PZPP20742 1482 aa25.65■■□□□ 1.7
PAXBP1-204ENST00000443785 PAK3O75914 559 aaPredicted RBP25.64■■□□□ 1.69
PAXBP1-204ENST00000443785 CAMSAP2Q08AD1 1489 aa25.63■■□□□ 1.69
PAXBP1-204ENST00000443785 CC2D1BQ5T0F9 858 aaKnown RBP25.63■■□□□ 1.69
PAXBP1-204ENST00000443785 DHX29Q7Z478 1369 aaKnown RBP25.62■■□□□ 1.69
PAXBP1-204ENST00000443785 MRC2Q9UBG0 1479 aa25.61■■□□□ 1.69
PAXBP1-204ENST00000443785 ROCK1Q13464 1354 aa25.61■■□□□ 1.69
PAXBP1-204ENST00000443785 NBPF1Q3BBV0 1214 aa25.61■■□□□ 1.69
PAXBP1-204ENST00000443785 SKAP1Q86WV1 359 aa25.61■■□□□ 1.69
PAXBP1-204ENST00000443785 NUDCQ9Y266 331 aa25.61■■□□□ 1.69
PAXBP1-204ENST00000443785 FANCIQ9NVI1 1328 aa25.59■■□□□ 1.69
PAXBP1-204ENST00000443785 ANKRD50Q9ULJ7 1429 aa25.59■■□□□ 1.69
PAXBP1-204ENST00000443785 PNISRQ8TF01 805 aaKnown RBP25.59■■□□□ 1.69
PAXBP1-204ENST00000443785 KIAA0586Q9BVV6 1533 aa25.58■■□□□ 1.69
PAXBP1-204ENST00000443785 ANKRD30AQ9BXX3 1397 aa25.57■■□□□ 1.68
PAXBP1-204ENST00000443785 GPATCH8Q9UKJ3 1502 aaKnown RBP25.57■■□□□ 1.68
PAXBP1-204ENST00000443785 TROQ12816 1431 aaPredicted RBP25.57■■□□□ 1.68
PAXBP1-204ENST00000443785 KIAA1107Q9UPP5 1409 aa25.57■■□□□ 1.68
PAXBP1-204ENST00000443785 KIF14Q15058 1648 aa25.55■■□□□ 1.68
PAXBP1-204ENST00000443785 PLIN1O60240 522 aa25.55■■□□□ 1.68
PAXBP1-204ENST00000443785 KIAA0556O60303 1618 aa25.54■■□□□ 1.68
PAXBP1-204ENST00000443785 CDCA7LQ96GN5 454 aa25.54■■□□□ 1.68
PAXBP1-204ENST00000443785 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
PAXBP1-204ENST00000443785 GRIN2AQ12879 1464 aa25.53■■□□□ 1.68
PAXBP1-204ENST00000443785 DNMT1P26358 1616 aaKnown RBP25.52■■□□□ 1.68
PAXBP1-204ENST00000443785 EXOC6Q8TAG9 804 aa25.52■■□□□ 1.68
PAXBP1-204ENST00000443785 BCORL1Q5H9F3 1711 aa25.5■■□□□ 1.67
PAXBP1-204ENST00000443785 ROCK2O75116 1388 aaKnown RBP25.5■■□□□ 1.67
PAXBP1-204ENST00000443785 RAPGEF6Q8TEU7 1601 aa25.49■■□□□ 1.67
PAXBP1-204ENST00000443785 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
PAXBP1-204ENST00000443785 KIF15Q9NS87 1388 aa25.44■■□□□ 1.66
PAXBP1-204ENST00000443785 ERICH6BQ5W0A0 696 aa25.44■■□□□ 1.66
PAXBP1-204ENST00000443785 C9orf84Q5VXU9 1444 aa25.43■■□□□ 1.66
PAXBP1-204ENST00000443785 NOP58Q9Y2X3 529 aaKnown RBP25.43■■□□□ 1.66
PAXBP1-204ENST00000443785 SMG6Q86US8 1419 aaKnown RBP25.41■■□□□ 1.66
PAXBP1-204ENST00000443785 CARMIL2Q6F5E8 1435 aa25.36■■□□□ 1.65
PAXBP1-204ENST00000443785 DEKP35659 375 aaKnown RBP25.36■■□□□ 1.65
PAXBP1-204ENST00000443785 RCAN3Q9UKA8 241 aa25.36■■□□□ 1.65
PAXBP1-204ENST00000443785 PANK3Q9H999 370 aa25.36■■□□□ 1.65
PAXBP1-204ENST00000443785 MYBBP1AQ9BQG0 1328 aaKnown RBP25.36■■□□□ 1.65
PAXBP1-204ENST00000443785 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
PAXBP1-204ENST00000443785 ANP32AP39687 249 aaKnown RBP25.34■■□□□ 1.65
PAXBP1-204ENST00000443785 CEP170Q5SW79 1584 aa25.34■■□□□ 1.65
PAXBP1-204ENST00000443785 RRP1P56182 461 aaKnown RBP25.33■■□□□ 1.64
PAXBP1-204ENST00000443785 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.64
PAXBP1-204ENST00000443785 ATP10BO94823 1461 aa25.32■■□□□ 1.64
PAXBP1-204ENST00000443785 LAS1LQ9Y4W2 734 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms