RNA–Protein interactions for RNA: ENST00000443166.5

GTF2I-203, Transcript of general transcription factor IIi, humanhuman

TSL 1 (best) BASIC

Gene GTF2I, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-203ENST00000443166 ARHGEF12Q9NZN5 1544 aa20.9■□□□□ 0.94
GTF2I-203ENST00000443166 UHRF1BP1Q6BDS2 1440 aa20.89■□□□□ 0.94
GTF2I-203ENST00000443166 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
GTF2I-203ENST00000443166 MAGI2Q86UL8 1455 aa20.88■□□□□ 0.93
GTF2I-203ENST00000443166 CFAP74Q9C0B2 1584 aa20.88■□□□□ 0.93
GTF2I-203ENST00000443166 MED1Q15648 1581 aaPredicted RBP20.84■□□□□ 0.93
GTF2I-203ENST00000443166 MLECQ14165 292 aa20.83■□□□□ 0.93
GTF2I-203ENST00000443166 FAM9AQ8IZU1 332 aaPredicted RBP20.79■□□□□ 0.92
GTF2I-203ENST00000443166 ARID3CA6NKF2 412 aa20.78■□□□□ 0.92
GTF2I-203ENST00000443166 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
GTF2I-203ENST00000443166 CEBPAP49715 358 aaPredicted RBP20.77■□□□□ 0.92
GTF2I-203ENST00000443166 UBAP1LF5GYI3 381 aa20.75■□□□□ 0.91
GTF2I-203ENST00000443166 ATP10AO60312 1499 aa20.73■□□□□ 0.91
GTF2I-203ENST00000443166 NCOA1Q15788 1441 aa20.72■□□□□ 0.91
GTF2I-203ENST00000443166 C9orf84Q5VXU9 1444 aa20.71■□□□□ 0.91
GTF2I-203ENST00000443166 RAPGEF6Q8TEU7 1601 aa20.71■□□□□ 0.91
GTF2I-203ENST00000443166 C3P01024 1663 aa20.69■□□□□ 0.9
GTF2I-203ENST00000443166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.89
GTF2I-203ENST00000443166 TRAPPC8Q9Y2L5 1435 aa20.61■□□□□ 0.89
GTF2I-203ENST00000443166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
GTF2I-203ENST00000443166 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
GTF2I-203ENST00000443166 HSPA1LP34931 641 aa20.6■□□□□ 0.89
GTF2I-203ENST00000443166 ZNF335Q9H4Z2 1342 aaPredicted RBP20.59■□□□□ 0.89
GTF2I-203ENST00000443166 NUP153P49790 1475 aaKnown RBP20.59■□□□□ 0.89
GTF2I-203ENST00000443166 CAMSAP1Q5T5Y3 1602 aa20.59■□□□□ 0.89
GTF2I-203ENST00000443166 SCAPERQ9BY12 1400 aa20.59■□□□□ 0.89
GTF2I-203ENST00000443166 SAMD9Q5K651 1589 aa20.56■□□□□ 0.88
GTF2I-203ENST00000443166 REREQ9P2R6 1566 aa20.55■□□□□ 0.88
GTF2I-203ENST00000443166 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
GTF2I-203ENST00000443166 P3H3Q8IVL6 736 aa20.54■□□□□ 0.88
GTF2I-203ENST00000443166 AGLP35573 1532 aa20.5■□□□□ 0.87
GTF2I-203ENST00000443166 PLCH2O75038 1416 aa20.49■□□□□ 0.87
GTF2I-203ENST00000443166 PLA2R1Q13018 1463 aa20.48■□□□□ 0.87
GTF2I-203ENST00000443166 PRXQ9BXM0 1461 aa20.48■□□□□ 0.87
GTF2I-203ENST00000443166 KDM5CP41229 1560 aa20.47■□□□□ 0.87
GTF2I-203ENST00000443166 DIP2CQ9Y2E4 1556 aa20.47■□□□□ 0.87
GTF2I-203ENST00000443166 NPATQ14207 1427 aa20.47■□□□□ 0.87
GTF2I-203ENST00000443166 ZNF518AQ6AHZ1 1483 aa20.47■□□□□ 0.87
GTF2I-203ENST00000443166 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
GTF2I-203ENST00000443166 CNTLNQ9NXG0 1405 aa20.46■□□□□ 0.87
GTF2I-203ENST00000443166 TOM1O60784 492 aa20.46■□□□□ 0.87
GTF2I-203ENST00000443166 NCKAP5LQ9HCH0 1330 aa20.46■□□□□ 0.87
GTF2I-203ENST00000443166 PKD2Q13563 968 aa20.45■□□□□ 0.86
GTF2I-203ENST00000443166 ESF1Q9H501 851 aaKnown RBP20.45■□□□□ 0.86
GTF2I-203ENST00000443166 ZNF142P52746 1687 aaPredicted RBP20.45■□□□□ 0.86
GTF2I-203ENST00000443166 PIP4K2BP78356 416 aa20.44■□□□□ 0.86
GTF2I-203ENST00000443166 MROH2AA6NES4 1674 aa20.44■□□□□ 0.86
GTF2I-203ENST00000443166 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
GTF2I-203ENST00000443166 TCOF1Q13428 1488 aaKnown RBP20.43■□□□□ 0.86
GTF2I-203ENST00000443166 MYO5CQ9NQX4 1742 aa20.41■□□□□ 0.86
GTF2I-203ENST00000443166 CPS1P31327 1500 aa20.4■□□□□ 0.86
GTF2I-203ENST00000443166 ABCA6Q8N139 1617 aa20.4■□□□□ 0.86
GTF2I-203ENST00000443166 EFCAB2Q5VUJ9 269 aa20.38■□□□□ 0.85
GTF2I-203ENST00000443166 MYO3AQ8NEV4 1616 aa20.36■□□□□ 0.85
GTF2I-203ENST00000443166 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
GTF2I-203ENST00000443166 MLH3Q9UHC1 1453 aa20.34■□□□□ 0.85
GTF2I-203ENST00000443166 CEP170BQ9Y4F5 1589 aaPredicted RBP20.34■□□□□ 0.85
GTF2I-203ENST00000443166 ALKQ9UM73 1620 aa20.32■□□□□ 0.84
GTF2I-203ENST00000443166 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
GTF2I-203ENST00000443166 RGS17Q9UGC6 210 aaPredicted RBP20.32■□□□□ 0.84
GTF2I-203ENST00000443166 AFAP1Q8N556 730 aa20.31■□□□□ 0.84
GTF2I-203ENST00000443166 MYT1LQ9UL68 1186 aa20.28■□□□□ 0.84
GTF2I-203ENST00000443166 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
GTF2I-203ENST00000443166 ZMYM3Q14202 1370 aa20.27■□□□□ 0.84
GTF2I-203ENST00000443166 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.83
GTF2I-203ENST00000443166 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
GTF2I-203ENST00000443166 ARHGAP5Q13017 1502 aa20.23■□□□□ 0.83
GTF2I-203ENST00000443166 KIDINS220Q9ULH0 1771 aa20.22■□□□□ 0.83
GTF2I-203ENST00000443166 NEURL4Q96JN8 1562 aa20.21■□□□□ 0.83
GTF2I-203ENST00000443166 CLTCQ00610 1675 aaKnown RBP20.2■□□□□ 0.82
GTF2I-203ENST00000443166 DNMT1P26358 1616 aaKnown RBP20.19■□□□□ 0.82
GTF2I-203ENST00000443166 VWDEQ8N2E2 1590 aa20.18■□□□□ 0.82
GTF2I-203ENST00000443166 KIF14Q15058 1648 aa20.18■□□□□ 0.82
GTF2I-203ENST00000443166 A2ML1A8K2U0 1454 aa20.17■□□□□ 0.82
GTF2I-203ENST00000443166 ITSN2Q9NZM3 1697 aa20.16■□□□□ 0.82
GTF2I-203ENST00000443166 CDC42BPBQ9Y5S2 1711 aa20.16■□□□□ 0.82
GTF2I-203ENST00000443166 MAPK8IP2Q13387 824 aaPredicted RBP20.15■□□□□ 0.82
GTF2I-203ENST00000443166 RNF17Q9BXT8 1623 aaKnown RBP20.15■□□□□ 0.82
GTF2I-203ENST00000443166 ABCC1P33527 1531 aa20.14■□□□□ 0.81
GTF2I-203ENST00000443166 POTEAQ6S8J7 498 aa20.14■□□□□ 0.81
GTF2I-203ENST00000443166 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
GTF2I-203ENST00000443166 SYNMO15061 1565 aa20.08■□□□□ 0.81
GTF2I-203ENST00000443166 CDK11AQ9UQ88 783 aaPredicted RBP20.08■□□□□ 0.81
GTF2I-203ENST00000443166 PREX2Q70Z35 1606 aa20.08■□□□□ 0.8
GTF2I-203ENST00000443166 TROQ12816 1431 aaPredicted RBP20.06■□□□□ 0.8
GTF2I-203ENST00000443166 LRRC7Q96NW7 1537 aa20.05■□□□□ 0.8
GTF2I-203ENST00000443166 STRCP1A6NGW2 1772 aa20.05■□□□□ 0.8
GTF2I-203ENST00000443166 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
GTF2I-203ENST00000443166 MED14O60244 1454 aa20.05■□□□□ 0.8
GTF2I-203ENST00000443166 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
GTF2I-203ENST00000443166 SAMD9LQ8IVG5 1584 aa20.03■□□□□ 0.8
GTF2I-203ENST00000443166 CLIP1P30622 1438 aa20.02■□□□□ 0.8
GTF2I-203ENST00000443166 RANGAP1P46060 587 aaPredicted RBP20.02■□□□□ 0.8
GTF2I-203ENST00000443166 ANKLE2Q86XL3 938 aa20■□□□□ 0.79
GTF2I-203ENST00000443166 IQGAP1P46940 1657 aa20■□□□□ 0.79
GTF2I-203ENST00000443166 NPHP4O75161 1426 aaPredicted RBP19.99■□□□□ 0.79
GTF2I-203ENST00000443166 SRCAPQ6ZRS2 3230 aa19.97■□□□□ 0.79
GTF2I-203ENST00000443166 UPF1Q92900 1129 aaKnown RBP eCLIP19.97■□□□□ 0.79
GTF2I-203ENST00000443166 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
GTF2I-203ENST00000443166 A2MP01023 1474 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms