RNA–Protein interactions for RNA: ENST00000443166.5

GTF2I-203, Transcript of general transcription factor IIi, humanhuman

TSL 1 (best) BASIC

Gene GTF2I, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-203ENST00000443166 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
GTF2I-203ENST00000443166 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
GTF2I-203ENST00000443166 ABCC9O60706 1549 aa29.33■■■□□ 2.29
GTF2I-203ENST00000443166 DNAJC5BQ9UF47 199 aa28.5■■■□□ 2.15
GTF2I-203ENST00000443166 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
GTF2I-203ENST00000443166 CCDC180Q9P1Z9 1646 aa28.41■■■□□ 2.14
GTF2I-203ENST00000443166 RB1CC1Q8TDY2 1594 aa27.53■■■□□ 2
GTF2I-203ENST00000443166 DNAJC5Q9H3Z4 198 aa27.08■■□□□ 1.93
GTF2I-203ENST00000443166 NACADO15069 1562 aa27.08■■□□□ 1.93
GTF2I-203ENST00000443166 PABPN1Q86U42 306 aaKnown RBP eCLIP27.05■■□□□ 1.92
GTF2I-203ENST00000443166 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
GTF2I-203ENST00000443166 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.87
GTF2I-203ENST00000443166 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
GTF2I-203ENST00000443166 CC2D2AQ9P2K1 1620 aa26.51■■□□□ 1.83
GTF2I-203ENST00000443166 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
GTF2I-203ENST00000443166 SHROOM4Q9ULL8 1493 aa26.39■■□□□ 1.82
GTF2I-203ENST00000443166 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
GTF2I-203ENST00000443166 EIF4G1Q04637 1599 aaKnown RBP26.19■■□□□ 1.78
GTF2I-203ENST00000443166 CUX2O14529 1486 aa25.87■■□□□ 1.73
GTF2I-203ENST00000443166 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
GTF2I-203ENST00000443166 DCAF1Q9Y4B6 1507 aa25.61■■□□□ 1.69
GTF2I-203ENST00000443166 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
GTF2I-203ENST00000443166 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
GTF2I-203ENST00000443166 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
GTF2I-203ENST00000443166 PHF23Q9BUL5 403 aaPredicted RBP25.13■■□□□ 1.61
GTF2I-203ENST00000443166 NCAPD3P42695 1498 aa24.99■■□□□ 1.59
GTF2I-203ENST00000443166 THOC2Q8NI27 1593 aaKnown RBP24.96■■□□□ 1.59
GTF2I-203ENST00000443166 NESP48681 1621 aa24.87■■□□□ 1.57
GTF2I-203ENST00000443166 SENP3Q9H4L4 574 aaPredicted RBP24.78■■□□□ 1.56
GTF2I-203ENST00000443166 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
GTF2I-203ENST00000443166 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
GTF2I-203ENST00000443166 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.54
GTF2I-203ENST00000443166 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
GTF2I-203ENST00000443166 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
GTF2I-203ENST00000443166 BAZ1AQ9NRL2 1556 aaPredicted RBP24.52■■□□□ 1.52
GTF2I-203ENST00000443166 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
GTF2I-203ENST00000443166 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
GTF2I-203ENST00000443166 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
GTF2I-203ENST00000443166 OSCARQ8IYS5 282 aa24.4■■□□□ 1.5
GTF2I-203ENST00000443166 WDR62O43379 1518 aa24.35■■□□□ 1.49
GTF2I-203ENST00000443166 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
GTF2I-203ENST00000443166 RIMBP3CA6NJZ7 1639 aa24.27■■□□□ 1.48
GTF2I-203ENST00000443166 RIMBP3BA6NNM3 1639 aa24.27■■□□□ 1.48
GTF2I-203ENST00000443166 RIMBP3Q9UFD9 1639 aa24.27■■□□□ 1.48
GTF2I-203ENST00000443166 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
GTF2I-203ENST00000443166 CADPSQ9ULU8 1353 aa24.13■■□□□ 1.45
GTF2I-203ENST00000443166 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
GTF2I-203ENST00000443166 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
GTF2I-203ENST00000443166 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
GTF2I-203ENST00000443166 FANCD2Q9BXW9 1451 aa23.86■■□□□ 1.41
GTF2I-203ENST00000443166 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
GTF2I-203ENST00000443166 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
GTF2I-203ENST00000443166 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
GTF2I-203ENST00000443166 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
GTF2I-203ENST00000443166 CFTRP13569 1480 aa23.64■■□□□ 1.38
GTF2I-203ENST00000443166 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
GTF2I-203ENST00000443166 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
GTF2I-203ENST00000443166 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
GTF2I-203ENST00000443166 CHD1O14646 1710 aa23.54■■□□□ 1.36
GTF2I-203ENST00000443166 WIZO95785 1651 aa23.49■■□□□ 1.35
GTF2I-203ENST00000443166 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
GTF2I-203ENST00000443166 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
GTF2I-203ENST00000443166 TOPBP1Q92547 1522 aa23.29■■□□□ 1.32
GTF2I-203ENST00000443166 ILDR1Q86SU0 546 aaPredicted RBP23.27■■□□□ 1.32
GTF2I-203ENST00000443166 CLASP1Q7Z460 1538 aa23.24■■□□□ 1.31
GTF2I-203ENST00000443166 FBLN2P98095 1184 aa23.23■■□□□ 1.31
GTF2I-203ENST00000443166 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.313e-13■■■□□ 15.4
GTF2I-203ENST00000443166 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
GTF2I-203ENST00000443166 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
GTF2I-203ENST00000443166 TOP2AP11388 1531 aaKnown RBP23.15■■□□□ 1.3
GTF2I-203ENST00000443166 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
GTF2I-203ENST00000443166 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
GTF2I-203ENST00000443166 FOXD1Q16676 465 aa23.1■■□□□ 1.29
GTF2I-203ENST00000443166 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
GTF2I-203ENST00000443166 PLPPR3Q6T4P5 718 aa23.02■■□□□ 1.28
GTF2I-203ENST00000443166 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
GTF2I-203ENST00000443166 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
GTF2I-203ENST00000443166 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
GTF2I-203ENST00000443166 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
GTF2I-203ENST00000443166 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
GTF2I-203ENST00000443166 KIF13AQ9H1H9 1805 aa22.92■■□□□ 1.26
GTF2I-203ENST00000443166 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
GTF2I-203ENST00000443166 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
GTF2I-203ENST00000443166 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
GTF2I-203ENST00000443166 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
GTF2I-203ENST00000443166 SOGA1O94964 1423 aa22.82■■□□□ 1.24
GTF2I-203ENST00000443166 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
GTF2I-203ENST00000443166 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
GTF2I-203ENST00000443166 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
GTF2I-203ENST00000443166 PBRM1Q86U86 1689 aa22.67■■□□□ 1.22
GTF2I-203ENST00000443166 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
GTF2I-203ENST00000443166 CEP170Q5SW79 1584 aa22.62■■□□□ 1.21
GTF2I-203ENST00000443166 KDM6BO15054 1643 aa22.6■■□□□ 1.21
GTF2I-203ENST00000443166 ABCC10Q5T3U5 1492 aa22.58■■□□□ 1.2
GTF2I-203ENST00000443166 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
GTF2I-203ENST00000443166 FAM69CQ0P6D2 419 aa22.52■■□□□ 1.2
GTF2I-203ENST00000443166 DIP2BQ9P265 1576 aa22.5■■□□□ 1.19
GTF2I-203ENST00000443166 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
GTF2I-203ENST00000443166 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
GTF2I-203ENST00000443166 HECW2Q9P2P5 1572 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms