RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CFAP74Q9C0B2 1584 aa10.99□□□□□ -0.65
HDAC6-210ENST00000441703 SIGLEC1Q9BZZ2 1709 aa10.99□□□□□ -0.65
HDAC6-210ENST00000441703 MAGI2Q86UL8 1455 aa10.99□□□□□ -0.65
HDAC6-210ENST00000441703 ZMYM4Q5VZL5 1548 aa10.99□□□□□ -0.65
HDAC6-210ENST00000441703 ARHGEF12Q9NZN5 1544 aa10.98□□□□□ -0.65
HDAC6-210ENST00000441703 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
HDAC6-210ENST00000441703 SETD1BQ9UPS6 1966 aaKnown RBP10.96□□□□□ -0.65
HDAC6-210ENST00000441703 HECW1Q76N89 1606 aa10.94□□□□□ -0.66
HDAC6-210ENST00000441703 C9orf84Q5VXU9 1444 aa10.93□□□□□ -0.66
HDAC6-210ENST00000441703 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
HDAC6-210ENST00000441703 ATP10AO60312 1499 aa10.93□□□□□ -0.66
HDAC6-210ENST00000441703 HSPA1LP34931 641 aa10.92□□□□□ -0.66
HDAC6-210ENST00000441703 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
HDAC6-210ENST00000441703 NCOA1Q15788 1441 aa10.92□□□□□ -0.66
HDAC6-210ENST00000441703 PIP4K2BP78356 416 aa10.91□□□□□ -0.66
HDAC6-210ENST00000441703 ZNF335Q9H4Z2 1342 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-210ENST00000441703 PLEKHD1A6NEE1 506 aa10.9□□□□□ -0.66
HDAC6-210ENST00000441703 RAPGEF6Q8TEU7 1601 aa10.9□□□□□ -0.66
HDAC6-210ENST00000441703 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
HDAC6-210ENST00000441703 SCAPERQ9BY12 1400 aa10.88□□□□□ -0.67
HDAC6-210ENST00000441703 TRAPPC8Q9Y2L5 1435 aa10.87□□□□□ -0.67
HDAC6-210ENST00000441703 C3P01024 1663 aa10.87□□□□□ -0.67
HDAC6-210ENST00000441703 CAMSAP1Q5T5Y3 1602 aa10.87□□□□□ -0.67
HDAC6-210ENST00000441703 TOM1O60784 492 aa10.86□□□□□ -0.67
HDAC6-210ENST00000441703 NCKAP5LQ9HCH0 1330 aa10.85□□□□□ -0.67
HDAC6-210ENST00000441703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDAC6-210ENST00000441703 SAMD9Q5K651 1589 aa10.85□□□□□ -0.67
HDAC6-210ENST00000441703 PRXQ9BXM0 1461 aa10.84□□□□□ -0.67
HDAC6-210ENST00000441703 NUP153P49790 1475 aaKnown RBP10.82□□□□□ -0.68
HDAC6-210ENST00000441703 PKD2Q13563 968 aa10.82□□□□□ -0.68
HDAC6-210ENST00000441703 PPP6R1Q9UPN7 881 aa10.81□□□□□ -0.68
HDAC6-210ENST00000441703 CNTLNQ9NXG0 1405 aa10.79□□□□□ -0.68
HDAC6-210ENST00000441703 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
HDAC6-210ENST00000441703 SENP3Q9H4L4 574 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-210ENST00000441703 ZNF518AQ6AHZ1 1483 aa10.79□□□□□ -0.68
HDAC6-210ENST00000441703 PLCH2O75038 1416 aa10.78□□□□□ -0.68
HDAC6-210ENST00000441703 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
HDAC6-210ENST00000441703 PLA2R1Q13018 1463 aa10.77□□□□□ -0.69
HDAC6-210ENST00000441703 AGLP35573 1532 aa10.77□□□□□ -0.69
HDAC6-210ENST00000441703 REREQ9P2R6 1566 aa10.77□□□□□ -0.69
HDAC6-210ENST00000441703 DIP2CQ9Y2E4 1556 aa10.77□□□□□ -0.69
HDAC6-210ENST00000441703 NPATQ14207 1427 aa10.76□□□□□ -0.69
HDAC6-210ENST00000441703 CPS1P31327 1500 aa10.76□□□□□ -0.69
HDAC6-210ENST00000441703 PTPRKQ15262 1439 aa10.75□□□□□ -0.69
HDAC6-210ENST00000441703 AFAP1Q8N556 730 aa10.74□□□□□ -0.69
HDAC6-210ENST00000441703 KDM5CP41229 1560 aa10.73□□□□□ -0.69
HDAC6-210ENST00000441703 MYO5CQ9NQX4 1742 aa10.73□□□□□ -0.69
HDAC6-210ENST00000441703 RANGAP1P46060 587 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-210ENST00000441703 TCOF1Q13428 1488 aaKnown RBP10.73□□□□□ -0.69
HDAC6-210ENST00000441703 ZNF142P52746 1687 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-210ENST00000441703 ABCA6Q8N139 1617 aa10.72□□□□□ -0.69
HDAC6-210ENST00000441703 MYO3AQ8NEV4 1616 aa10.72□□□□□ -0.69
HDAC6-210ENST00000441703 MROH2AA6NES4 1674 aa10.72□□□□□ -0.69
HDAC6-210ENST00000441703 ZMYM3Q14202 1370 aa10.71□□□□□ -0.69
HDAC6-210ENST00000441703 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-210ENST00000441703 CEP170BQ9Y4F5 1589 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-210ENST00000441703 ARHGAP5Q13017 1502 aa10.7□□□□□ -0.7
HDAC6-210ENST00000441703 SHANK2Q9UPX8 1470 aa10.7□□□□□ -0.7
HDAC6-210ENST00000441703 MLH3Q9UHC1 1453 aa10.69□□□□□ -0.7
HDAC6-210ENST00000441703 CDK13Q14004 1512 aaKnown RBP10.68□□□□□ -0.7
HDAC6-210ENST00000441703 POTEAQ6S8J7 498 aa10.66□□□□□ -0.7
HDAC6-210ENST00000441703 POLR1AO95602 1720 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-210ENST00000441703 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-210ENST00000441703 CDK11AQ9UQ88 783 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-210ENST00000441703 CLTCQ00610 1675 aaKnown RBP10.65□□□□□ -0.7
HDAC6-210ENST00000441703 KIF14Q15058 1648 aa10.64□□□□□ -0.71
HDAC6-210ENST00000441703 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
HDAC6-210ENST00000441703 A2ML1A8K2U0 1454 aa10.63□□□□□ -0.71
HDAC6-210ENST00000441703 ALKQ9UM73 1620 aa10.63□□□□□ -0.71
HDAC6-210ENST00000441703 DNMT1P26358 1616 aaKnown RBP10.62□□□□□ -0.71
HDAC6-210ENST00000441703 RNF17Q9BXT8 1623 aaKnown RBP10.62□□□□□ -0.71
HDAC6-210ENST00000441703 CLIP1P30622 1438 aa10.61□□□□□ -0.71
HDAC6-210ENST00000441703 VWDEQ8N2E2 1590 aa10.6□□□□□ -0.71
HDAC6-210ENST00000441703 NEURL4Q96JN8 1562 aa10.6□□□□□ -0.71
HDAC6-210ENST00000441703 KIDINS220Q9ULH0 1771 aa10.6□□□□□ -0.71
HDAC6-210ENST00000441703 ANKLE2Q86XL3 938 aa10.6□□□□□ -0.71
HDAC6-210ENST00000441703 ITSN2Q9NZM3 1697 aa10.6□□□□□ -0.71
HDAC6-210ENST00000441703 ABCC1P33527 1531 aa10.59□□□□□ -0.71
HDAC6-210ENST00000441703 GGT6Q6P531 493 aa10.59□□□□□ -0.71
HDAC6-210ENST00000441703 TROQ12816 1431 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-210ENST00000441703 SYNMO15061 1565 aa10.57□□□□□ -0.72
HDAC6-210ENST00000441703 CSRNP3Q8WYN3 585 aa10.57□□□□□ -0.72
HDAC6-210ENST00000441703 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
HDAC6-210ENST00000441703 NPHP4O75161 1426 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-210ENST00000441703 CDC42BPBQ9Y5S2 1711 aa10.56□□□□□ -0.72
HDAC6-210ENST00000441703 LRRC7Q96NW7 1537 aa10.56□□□□□ -0.72
HDAC6-210ENST00000441703 EEA1Q15075 1411 aa10.56□□□□□ -0.72
HDAC6-210ENST00000441703 SPAG9O60271 1321 aaKnown RBP10.56□□□□□ -0.72
HDAC6-210ENST00000441703 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
HDAC6-210ENST00000441703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC6-210ENST00000441703 TNRQ92752 1358 aa10.54□□□□□ -0.72
HDAC6-210ENST00000441703 THEMISQ8N1K5 641 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-210ENST00000441703 SAMD9LQ8IVG5 1584 aa10.53□□□□□ -0.72
HDAC6-210ENST00000441703 FMN1Q68DA7 1419 aa10.53□□□□□ -0.72
HDAC6-210ENST00000441703 A2MP01023 1474 aa10.53□□□□□ -0.72
HDAC6-210ENST00000441703 IQGAP1P46940 1657 aa10.53□□□□□ -0.72
HDAC6-210ENST00000441703 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
HDAC6-210ENST00000441703 ZNF777Q9ULD5 760 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-210ENST00000441703 MED14O60244 1454 aa10.52□□□□□ -0.73
HDAC6-210ENST00000441703 FAM135AQ9P2D6 1515 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 237.4 ms